Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 6.8e-113 410.6 199 100.0
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 3.0e-108 395.2 199 96.0
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 7.4e-83 310.8 189 77.8
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 1.4e-81 306.6 193 74.6
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.4e-81 305.8 190 75.3
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 2.4e-81 305.8 199 72.9
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 4.0e-81 305.1 190 74.2
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 9.0e-81 303.9 195 73.3
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 9.0e-81 303.9 195 73.3
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 9.0e-81 303.9 195 73.8
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 9.0e-81 303.9 191 74.3
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.5e-80 303.1 190 75.3
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.0e-80 302.8 190 74.7
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 2.0e-80 302.8 190 74.7
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 2.6e-80 302.4 192 71.9
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 4.5e-80 301.6 193 73.1
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 4.5e-80 301.6 193 73.6
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 5.8e-80 301.2 188 73.4
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 7.6e-80 300.8 196 73.0
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 2.2e-79 299.3 185 76.2
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 4.9e-79 298.1 196 71.4
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 1.2e-77 293.5 190 72.1
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 1.6e-77 293.1 189 73.0
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 1.6e-77 293.1 191 71.2
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 2.1e-77 292.7 189 73.5
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 7.9e-77 290.8 189 70.9
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 7.9e-77 290.8 190 71.6
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 1.0e-76 290.4 188 73.9
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 1.8e-76 289.7 190 72.1
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 3.0e-76 288.9 190 71.6
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 3.9e-76 288.5 186 73.7
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 1.1e-75 287.0 230 62.2
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 1.5e-75 286.6 189 70.9
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 1.9e-75 286.2 189 70.4
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 1.9e-75 286.2 189 71.4
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 2.5e-75 285.8 189 71.4
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 4.3e-75 285.0 189 71.4
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 4.3e-75 285.0 192 68.8
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 7.4e-75 284.3 189 69.3
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 1.3e-74 283.5 190 71.6
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.3e-74 283.5 186 71.5
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 1.6e-74 283.1 189 70.9
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 1.6e-74 283.1 190 71.1
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 1.6e-74 283.1 189 69.8
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 3.7e-74 282.0 199 66.8
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 4.8e-74 281.6 189 70.9
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 1.1e-73 280.4 186 71.0
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 1.1e-73 280.4 189 68.8
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 1.1e-73 280.4 185 71.4
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 1.1e-73 280.4 188 71.3
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 1.4e-73 280.0 189 70.4
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 1.8e-73 279.6 192 69.8
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 6.9e-73 277.7 188 69.1
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 9.0e-73 277.3 185 69.7
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 9.0e-73 277.3 189 70.9
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 1.2e-72 276.9 190 68.9
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 1.5e-72 276.6 190 68.9
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 2.0e-72 276.2 189 69.3
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 4.5e-72 275.0 197 67.0
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 5.9e-72 274.6 196 67.3
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 2.2e-71 272.7 185 68.1
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 2.2e-71 272.7 188 68.1
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 2.9e-71 272.3 192 67.2
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 3.8e-71 271.9 204 65.2
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 3.8e-71 271.9 196 66.8
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 3.8e-71 271.9 196 66.8
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 3.8e-71 271.9 192 66.1
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 6.5e-71 271.2 185 68.6
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 8.5e-71 270.8 190 67.4
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 2.5e-70 269.2 192 65.6
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 3.2e-70 268.9 190 68.4
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 5.5e-70 268.1 190 68.4
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 9.3e-70 267.3 190 66.8
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.2e-69 266.9 196 66.3
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 3.6e-69 265.4 193 66.3
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 4.6e-69 265.0 186 67.7
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 6.1e-69 264.6 186 67.2
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 1.3e-68 263.5 191 65.4
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 1.8e-68 263.1 194 64.4
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 2.3e-68 262.7 190 64.7
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 3.0e-68 262.3 188 68.1
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 1.9e-67 259.6 190 65.3
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 1.9e-67 259.6 197 62.9
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 2.5e-67 259.2 194 63.9
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 4.3e-67 258.5 190 64.2
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 4.3e-67 258.5 190 64.7
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 4.3e-67 258.5 190 64.7
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 5.7e-67 258.1 190 64.7
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 5.7e-67 258.1 190 64.7
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 9.7e-67 257.3 186 66.1
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 1.3e-66 256.9 194 64.4
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 3.7e-66 255.4 192 63.0
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 1.4e-65 253.4 193 64.8
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 3.1e-65 252.3 184 65.2
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 3.1e-65 252.3 220 57.7
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 4.1e-65 251.9 189 65.1
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 5.3e-65 251.5 192 63.5
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 1.0e-63 247.3 193 59.1
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.3e-63 246.9 150 74.7
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 2.9e-63 245.7 190 62.6
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 2.9e-63 245.7 193 62.2
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 6.5e-63 244.6 188 62.8
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 7.2e-62 241.1 184 63.0
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 1.2e-61 240.4 192 60.4
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.1e-59 233.8 189 59.8
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 3.3e-59 232.3 189 60.8
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 8.2e-58 227.6 189 60.3
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 4.1e-57 225.3 180 62.8
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 9.1e-57 224.2 186 58.1
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 2.0e-56 223.0 192 56.8
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 7.7e-56 221.1 192 56.8
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 1.0e-55 220.7 191 56.5
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 1.0e-55 220.7 147 66.7
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 5.0e-55 218.4 189 58.2
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 9.4e-54 214.2 190 56.3
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 2.7e-53 212.6 185 56.2
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 6.7e-52 208.0 189 55.6
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 7.4e-51 204.5 194 53.1
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.8e-50 202.6 137 67.2
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 3.2e-38 162.5 112 66.1
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 5.0e-31 138.7 92 69.6
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 7.2e-30 134.8 81 77.8
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 3.6e-29 132.5 110 59.1
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 2.8e-26 122.9 100 63.0
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 3.4e-19 99.4 121 46.3
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 5.4e-17 92.0 95 47.4
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 1.1e-06 57.8 78 39.7

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (2 genes)
Brassica carinata (3 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (4 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (4 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (3 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (1 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (4 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (3 genes)
Papaver somniferum (0 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings