Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028273 Camellia sinensis var. sinensis HOM05D001098 ORTHO05D012826 1.9e-31 138.7 76 100.0
CSS0035199 Camellia sinensis var. sinensis HOM05D001098 ORTHO05D002527 8.1e-14 80.1 65 78.5
TWI75G1677 Tripterygium wilfordii HOM05D001098 ORTHO05D002527 1.1e-13 79.7 65 76.9
CANSAT25G0204 Cannabis sativa HOM05D001098 ORTHO05D002527 1.4e-13 79.3 65 75.4
Sabra16G0108800 Salix brachista HOM05D000241 ORTHO05D001001 2.4e-13 78.6 72 68.1
GSVIVG01023864001 Vitis vinifera HOM05D001098 ORTHO05D002527 2.4e-13 78.6 65 75.4
Atru.chr5.3569 Acer truncatum HOM05D001098 ORTHO05D002527 3.1e-13 78.2 65 76.9
Ciclev10028748m.g Citrus clementina HOM05D001098 ORTHO05D002527 3.1e-13 78.2 65 76.9
Duzib248G0955 Durio zibethinus HOM05D001098 ORTHO05D002527 3.1e-13 78.2 65 76.9
ClCG02G010830 Citrullus lanatus HOM05D001098 ORTHO05D002527 4.0e-13 77.8 65 75.4
CsaV3_6G010050 Cucumis sativus L. HOM05D001098 ORTHO05D002527 4.0e-13 77.8 65 75.4
Dinv41864 Davidia involucrata HOM05D001098 ORTHO05D002527 4.0e-13 77.8 65 73.8
Hma1.2p1_0032F.1_g018710 Hydrangea macrophylla HOM05D001098 ORTHO05D002527 4.0e-13 77.8 65 76.9
Oeu012219.1 Olea europaea HOM05D001098 ORTHO05D002527 4.0e-13 77.8 65 75.4
Prupe.8G181000 Prunus persica HOM05D001098 ORTHO05D002527 4.0e-13 77.8 65 75.4
Sed0023457 Sechium edule HOM05D001098 ORTHO05D002527 4.0e-13 77.8 65 75.4
EL10Ac9g21546 Beta vulgaris HOM05D001098 ORTHO05D002527 5.2e-13 77.4 65 73.8
MELO3C013485.2 Cucumis melo HOM05D001098 ORTHO05D002527 5.2e-13 77.4 65 73.8
ECA233G3688 Erigeron canadensis HOM05D001098 ORTHO05D002527 5.2e-13 77.4 65 75.4
HanXRQChr16g0515181 Helianthus annuus HOM05D001098 ORTHO05D002527 5.2e-13 77.4 65 75.4
Rhsim05G0044700 Rhododendron simsii HOM05D001098 ORTHO05D002527 5.2e-13 77.4 65 73.8
TWI79G1444 Tripterygium wilfordii HOM05D001098 ORTHO05D002527 5.2e-13 77.4 63 76.2
Actinidia17990 Actinidia chinensis HOM05D001098 ORTHO05D002527 6.8e-13 77.0 65 75.4
MSTRG.16957 Avicennia marina HOM05D001098 ORTHO05D002527 6.8e-13 77.0 64 75.0
Medtr5g099280 Medicago truncatula HOM05D001098 ORTHO05D002527 6.8e-13 77.0 65 73.8
Psat2g000520 Pisum sativum HOM05D001098 ORTHO05D002527 6.8e-13 77.0 65 73.8
Duzib132G1111 Durio zibethinus HOM05D001098 ORTHO05D002527 8.9e-13 76.6 65 75.4
Migut.B00005 Erythranthe guttata HOM05D001098 ORTHO05D002527 8.9e-13 76.6 65 75.4
Manes.18G113200 Manihot esculenta HOM05D001098 ORTHO05D002527 8.9e-13 76.6 64 75.0
TPR.G18630 Trifolium pratense HOM05D001098 ORTHO05D002527 8.9e-13 76.6 65 72.3
Cc09_g10880 Coffea canephora HOM05D001098 ORTHO05D002527 1.2e-12 76.3 64 70.3
Lsat_1_v5_gn_8_120701 Lactuca sativa HOM05D001098 ORTHO05D002527 1.2e-12 76.3 65 73.8
Phvul.008G292800 Phaseolus vulgaris HOM05D001098 ORTHO05D002527 1.2e-12 76.3 65 72.3
Actinidia20579 Actinidia chinensis HOM05D001098 ORTHO05D002527 1.5e-12 75.9 65 73.8
Ca_06505_v3 Cicer arietinum L. HOM05D001098 ORTHO05D002527 1.5e-12 75.9 65 72.3
Glyma.02G312000 Glycine max HOM05D001098 ORTHO05D002527 1.5e-12 75.9 65 72.3
Glyma.14G000600 Glycine max HOM05D001098 ORTHO05D002527 1.5e-12 75.9 65 72.3
LjContig00081g0022408 Lotus japonicus HOM05D001098 ORTHO05D002527 1.5e-12 75.9 65 72.3
Nn6g31647 Nelumbo nucifera HOM05D001098 ORTHO05D002527 1.5e-12 75.9 65 73.8
PSO541G0403 Papaver somniferum HOM05D001098 ORTHO05D002527 1.5e-12 75.9 65 72.3
PSO675G9097 Papaver somniferum HOM05D001098 ORTHO05D002527 1.5e-12 75.9 65 72.3
Gohir.A04G111700 Gossypium hirsutum HOM05D001098 ORTHO05D002527 2.0e-12 75.5 65 75.4
PGR142G3259 Punica granatum HOM05D001098 ORTHO05D002527 2.0e-12 75.5 65 73.8
Sed0023927 Sechium edule HOM05D001098 ORTHO05D002527 2.0e-12 75.5 65 73.8
Zm00001eb412040 Zea mays HOM05D001098 ORTHO05D002527 2.0e-12 75.5 63 76.2
COL.COLO4_34319 Corchorus olitorius HOM05D001098 ORTHO05D002527 2.6e-12 75.1 65 75.4
FvH4_2g16930 Fragaria vesca HOM05D001098 ORTHO05D002527 2.6e-12 75.1 63 74.6
FAN15G1608 Fragaria x ananassa HOM05D001098 ORTHO05D002527 2.6e-12 75.1 63 74.6
FAN24G1038 Fragaria x ananassa HOM05D001098 ORTHO05D002527 2.6e-12 75.1 63 74.6
FAN27G2361 Fragaria x ananassa HOM05D001098 ORTHO05D002527 2.6e-12 75.1 63 74.6
MBI01_g17242_MAGBIO Magnolia biondii HOM05D001098 ORTHO05D002527 2.6e-12 75.1 62 75.8
MBI01_g32424_MAGBIO Magnolia biondii HOM05D001098 ORTHO05D002527 2.6e-12 75.1 62 75.8
RcHm_v2.0_Chr6g0281071 Rosa chinensis HOM05D001098 ORTHO05D002527 2.6e-12 75.1 63 74.6
Thecc.02G147100 Theobroma cacao HOM05D001098 ORTHO05D002527 2.6e-12 75.1 65 75.4
Ah.01g017660 Amaranthus hybridus HOM05D001098 ORTHO05D002527 3.4e-12 74.7 65 73.8
arahy.Tifrunner.gnm1.ann1.1X8DY6 Arachis hypogaea HOM05D001098 ORTHO05D002527 3.4e-12 74.7 65 70.8
arahy.Tifrunner.gnm1.ann1.N1X7B2 Arachis hypogaea HOM05D001098 ORTHO05D002527 3.4e-12 74.7 65 70.8
Lalb_Chr10g0107701 Lupinus albus HOM05D001098 ORTHO05D002527 3.4e-12 74.7 65 69.2
Os07g0573700 Oryza sativa ssp. japonica HOM05D001098 ORTHO05D002527 3.4e-12 74.7 63 74.6
Potri.016G113200 Populus trichocarpa HOM05D001098 ORTHO05D002527 3.4e-12 74.7 65 72.3
Manes.02G204100 Manihot esculenta HOM05D001098 ORTHO05D002527 4.4e-12 74.3 65 73.8
Peaxi162Scf00296g01213 Petunia axillaris HOM05D001098 ORTHO05D002527 4.4e-12 74.3 65 72.3
CAN.G321.15 Capsicum annuum HOM05D001098 ORTHO05D002527 5.8e-12 73.9 65 70.8
Lj9A408T81 Lonicera japonica HOM05D001098 ORTHO05D002527 5.8e-12 73.9 65 73.8
MD05G1141000 Malus domestica HOM05D001098 ORTHO05D002527 5.8e-12 73.9 63 73.0
MD11G1242300 Malus domestica HOM05D001098 ORTHO05D002527 5.8e-12 73.9 63 73.0
Zm00001eb325140 Zea mays HOM05D001098 ORTHO05D002527 5.8e-12 73.9 64 70.3
Gohir.A13G064400 Gossypium hirsutum HOM05D001098 ORTHO05D002527 7.6e-12 73.6 65 72.3
Nitab4.5_0001003g0090 Nicotiana tabacum HOM05D001098 ORTHO05D002527 7.6e-12 73.6 65 70.8
Solyc11g008590.2 Solanum lycopersicum HOM05D001098 ORTHO05D002527 7.6e-12 73.6 65 70.8
Sopen11g004380 Solanum pennellii HOM05D001098 ORTHO05D002527 7.6e-12 73.6 65 70.8
PGSC0003DMG400016250 Solanum tuberosum HOM05D001098 ORTHO05D002527 7.6e-12 73.6 65 70.8
Aqoxy3G04159 Aquilegia oxysepala HOM05D001098 ORTHO05D002527 9.9e-12 73.2 64 71.9
Gohir.D04G152000 Gossypium hirsutum HOM05D001098 ORTHO05D002527 9.9e-12 73.2 65 73.8
Eucgr.I01538 Eucalyptus grandis HOM05D001098 ORTHO05D002527 1.3e-11 72.8 65 73.8
Haze_10071 Corylus avellana HOM05D001098 ORTHO05D002527 1.7e-11 72.4 65 72.3
BcaB03g12410 Brassica carinata HOM05D001098 ORTHO05D002527 2.2e-11 72.0 63 73.0
BcaC01g00493 Brassica carinata HOM05D001098 ORTHO05D002527 2.2e-11 72.0 63 73.0
BcaNung02390 Brassica carinata HOM05D001098 ORTHO05D002527 2.2e-11 72.0 63 73.0
BcaNung06457 Brassica carinata HOM05D001098 ORTHO05D002527 2.2e-11 72.0 63 73.0
C07p61120 Brassica napus HOM05D001098 ORTHO05D002527 2.2e-11 72.0 63 73.0
BolC7t46536H Brassica oleracea HOM05D001098 ORTHO05D002527 2.2e-11 72.0 63 73.0
BraA03t15424Z Brassica rapa HOM05D001098 ORTHO05D002527 2.2e-11 72.0 63 73.0
Carub.0007s0496 Capsella rubella HOM05D001098 ORTHO05D002527 2.2e-11 72.0 63 73.0
CARHR243660 Cardamine hirsuta HOM05D001098 ORTHO05D002527 2.2e-11 72.0 63 73.0
Thhalv10025582m.g Eutrema salsugineum HOM05D001098 ORTHO05D002527 2.2e-11 72.0 63 73.0
Sp7g33130 Schrenkiella parvula HOM05D001098 ORTHO05D002527 2.2e-11 72.0 63 73.0
Gorai.012G138800 Gossypium raimondii HOM05D001098 ORTHO05D002527 2.9e-11 71.6 65 72.3
TAR381G1518 Trochodendron aralioides HOM05D001098 ORTHO05D002527 3.8e-11 71.2 65 72.3
HPP92_015755 Vanilla planifolia HOM05D001098 ORTHO05D002527 3.8e-11 71.2 65 70.8
AL7G15820 Arabidopsis lyrata HOM05D001098 ORTHO05D002527 4.9e-11 70.9 63 71.4
CiPaw.05G093900 Carya illinoinensis HOM05D001098 ORTHO05D002527 6.4e-11 70.5 63 71.4
CiPaw.06G114700 Carya illinoinensis HOM05D001098 ORTHO05D002527 6.4e-11 70.5 63 71.4
AUR62010182 Chenopodium quinoa HOM05D001098 ORTHO05D002527 6.4e-11 70.5 65 69.2
Oeu050440.1 Olea europaea HOM05D001098 ORTHO05D002527 1.1e-10 69.7 62 71.0
SEGI_32505 Sequoiadendron giganteum HOM05D001098 ORTHO05D002527 1.1e-10 69.7 65 66.2
AUR62013184 Chenopodium quinoa HOM05D001098 ORTHO05D002527 1.4e-10 69.3 65 69.2
A01p03220 Brassica napus HOM05D001098 ORTHO05D002527 5.4e-10 67.4 64 71.9
A08p21890 Brassica napus HOM05D001098 ORTHO05D002527 5.4e-10 67.4 64 71.9
C03p80640 Brassica napus HOM05D001098 ORTHO05D002527 5.4e-10 67.4 64 71.9
BolC3t20307H Brassica oleracea HOM05D001098 ORTHO05D002527 5.4e-10 67.4 64 71.9
BraA01t00307Z Brassica rapa HOM05D001098 ORTHO05D002527 5.4e-10 67.4 64 71.9
BraA08t34142Z Brassica rapa HOM05D001098 ORTHO05D002527 5.4e-10 67.4 64 71.9
C01p03570 Brassica napus HOM05D001098 ORTHO05D002527 9.2e-10 66.6 64 68.8
BolC1t00346H Brassica oleracea HOM05D001098 ORTHO05D012826 9.2e-10 66.6 64 68.8
SEGI_11233 Sequoiadendron giganteum HOM05D001098 ORTHO05D002527 1.2e-09 66.2 65 66.2
unitig_90.g27539 Utricularia gibba HOM05D001098 ORTHO05D002527 1.3e-08 62.8 65 58.5
C07p61130 Brassica napus HOM05D001098 ORTHO05D012826 2.3e-08 62.0 63 68.3
BolC7t46537H Brassica oleracea HOM05D001098 ORTHO05D012826 2.3e-08 62.0 63 68.3
Nitab4.5_0009631g0030 Nicotiana tabacum HOM05D001098 ORTHO05D002527 2.3e-08 62.0 49 77.6
SalBow1G7648 Salvia bowleyana HOM05D001098 ORTHO05D002527 2.3e-08 62.0 49 77.6
SalBow7G2674 Salvia bowleyana HOM05D001098 ORTHO05D002527 2.3e-08 62.0 49 77.6
arahy.Tifrunner.gnm1.ann1.5U49GI Arachis hypogaea HOM05D001098 ORTHO05D002527 3.0e-08 61.6 51 70.6
arahy.Tifrunner.gnm1.ann1.7NF1VE Arachis hypogaea HOM05D001098 ORTHO05D002527 3.0e-08 61.6 51 70.6
Gohir.A01G095201 Gossypium hirsutum HOM05D001098 ORTHO05D012826 3.0e-08 61.6 43 81.4
VMungo0647G1862 Vigna mungo HOM05D001098 ORTHO05D002527 3.0e-08 61.6 50 74.0
QL06p014336 Quercus lobata HOM05D001098 ORTHO05D002527 5.1e-08 60.8 61 62.3
Gohir.A04G048165 Gossypium hirsutum HOM05D001098 ORTHO05D012826 8.7e-08 60.1 60 56.7
Gohir.A09G059050 Gossypium hirsutum HOM05D001098 ORTHO05D012826 8.7e-08 60.1 48 70.8
TAR376G1176 Trochodendron aralioides HOM05D003539 ORTHO05D004111 8.7e-08 60.1 53 69.8
Aqoxy2G01309 Aquilegia oxysepala HOM05D001098 ORTHO05D002527 1.1e-07 59.7 63 61.9
Aqoxy6G01547 Aquilegia oxysepala HOM05D001098 ORTHO05D002527 1.1e-07 59.7 63 61.9
A03p63540 Brassica napus HOM05D001098 ORTHO05D002527 1.1e-07 59.7 49 75.5
Rhsim11G0198300 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.5e-07 59.3 39 84.6
TAR628G0214 Trochodendron aralioides HOM05D000069 ORTHO05D000060 2.5e-07 58.5 51 70.6
Aa31sc18G70 Aethionema arabicum HOM05D001098 ORTHO05D002527 3.3e-07 58.2 57 64.9
Sc08g0002100 Simmondsia chinensis HOM05D001098 ORTHO05D002527 3.3e-07 58.2 50 68.0
Gohir.A12G104501 Gossypium hirsutum HOM05D001098 ORTHO05D012826 2.1e-06 55.5 37 83.8
SMO118G0063 Selaginella moellendorffii HOM05D001098 ORTHO05D002527 2.1e-06 55.5 58 60.3
C03p20580 Brassica napus HOM05D001098 ORTHO05D012826 6.2e-06 53.9 49 67.3
C03p64650 Brassica napus HOM05D001098 ORTHO05D012826 6.2e-06 53.9 49 67.3
BolC3t14466H Brassica oleracea HOM05D001098 ORTHO05D012826 6.2e-06 53.9 49 67.3
BolC3t18723H Brassica oleracea HOM05D001098 ORTHO05D012826 6.2e-06 53.9 49 67.3
DCAR_006386 Daucus carota HOM05D001098 ORTHO05D012826 8.1e-06 53.5 44 75.0

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (3 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (9 genes)
Brassica oleracea (6 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (7 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (2 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings