Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027559 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 0.0e+00 1273.8 675 100.0
Actinidia00336 Actinidia chinensis HOM05D004882 ORTHO05D005551 1.1e-202 710.7 789 56.5
Actinidia02424 Actinidia chinensis HOM05D004882 ORTHO05D005551 1.2e-196 690.6 776 57.1
CSS0002606 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 8.6e-192 674.5 737 58.6
Rhsim11G0146400 Rhododendron simsii HOM05D004882 ORTHO05D000089 6.0e-185 651.7 752 53.7
CSS0014319 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 4.3e-151 539.3 634 55.8
Dinv16049 Davidia involucrata HOM05D004882 ORTHO05D005551 1.6e-145 520.8 596 55.9
Hma1.2p1_2001F.1_g310650 Hydrangea macrophylla HOM05D004882 ORTHO05D005551 1.1e-138 498.0 735 47.6
TAR628G0407 Trochodendron aralioides HOM05D004882 ORTHO05D005551 1.1e-119 434.9 780 43.3
TAR376G0385 Trochodendron aralioides HOM05D004882 ORTHO05D005551 4.4e-119 433.0 761 43.1
Cfa004757 Carpinus fangiana HOM05D004882 ORTHO05D005551 3.5e-116 423.3 760 43.2
Haze_10355 Corylus avellana HOM05D004882 ORTHO05D005551 5.5e-114 416.0 748 43.0
Nitab4.5_0005609g0020 Nicotiana tabacum HOM05D004882 ORTHO05D005551 1.5e-111 407.9 670 43.1
QL11p027705 Quercus lobata HOM05D004882 ORTHO05D005551 3.3e-111 406.8 758 41.8
Lj5C223T12 Lonicera japonica HOM05D004882 ORTHO05D005551 9.7e-111 405.2 732 41.8
Nitab4.5_0001477g0110 Nicotiana tabacum HOM05D004882 ORTHO05D005551 4.8e-110 402.9 664 42.8
Manes.07G049500 Manihot esculenta HOM05D004882 ORTHO05D005551 1.0e-107 395.2 739 41.4
CiPaw.05G024800 Carya illinoinensis HOM05D004882 ORTHO05D005551 1.5e-106 391.3 759 40.1
Cc02_g20370 Coffea canephora HOM05D004882 ORTHO05D005551 1.5e-103 381.3 690 43.3
Nn6g34538 Nelumbo nucifera HOM05D004882 ORTHO05D005551 1.5e-103 381.3 775 39.1
PGSC0003DMG400005123 Solanum tuberosum HOM05D004882 ORTHO05D005551 9.8e-103 378.6 675 41.3
Sopen01g048900 Solanum pennellii HOM05D004882 ORTHO05D005551 2.2e-102 377.5 667 41.1
MD05G1112300 Malus domestica HOM05D004882 ORTHO05D005551 3.7e-102 376.7 728 40.5
CSS0049071 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 4.8e-102 376.3 409 59.2
MSTRG.16657 Avicennia marina HOM05D004882 ORTHO05D005551 8.3e-102 375.6 707 41.0
Solyc01g106540.4 Solanum lycopersicum HOM05D004882 ORTHO05D005551 8.3e-102 375.6 685 39.9
FvH4_2g02560 Fragaria vesca HOM05D004882 ORTHO05D005551 1.2e-100 371.7 739 40.2
FAN24G2723 Fragaria x ananassa HOM05D004882 ORTHO05D005551 1.2e-100 371.7 739 40.2
Peaxi162Scf00016g03342 Petunia axillaris HOM05D004882 ORTHO05D005551 3.5e-100 370.2 675 40.7
FAN15G2336 Fragaria x ananassa HOM05D004882 ORTHO05D005551 5.0e-99 366.3 724 39.1
CSS0009679 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 8.6e-99 365.5 359 65.5
FAN20G2896 Fragaria x ananassa HOM05D004882 ORTHO05D005551 2.8e-97 360.5 749 39.8
Eucgr.I02514 Eucalyptus grandis HOM05D004882 ORTHO05D005551 2.3e-96 357.5 697 40.9
Thecc.02G034500 Theobroma cacao HOM05D004882 ORTHO05D005551 6.8e-96 355.9 729 39.5
Potri.001G287800 Populus trichocarpa HOM05D004882 ORTHO05D005551 6.3e-94 349.4 779 37.4
Cpa.g.sc20.70 Carica papaya HOM05D004882 ORTHO05D005551 1.2e-92 345.1 769 37.3
FAN27G0728 Fragaria x ananassa HOM05D004882 ORTHO05D005551 2.7e-92 344.0 781 37.4
MD10G1114900 Malus domestica HOM05D004882 ORTHO05D005551 2.7e-92 344.0 714 39.6
Manes.10G090200 Manihot esculenta HOM05D004882 ORTHO05D005551 2.7e-92 344.0 748 38.1
Potri.009G081900 Populus trichocarpa HOM05D004882 ORTHO05D005551 7.8e-92 342.4 777 38.9
HanXRQChr05g0136851 Helianthus annuus HOM05D004882 ORTHO05D005551 1.0e-91 342.0 670 40.6
Prupe.8G156900 Prunus persica HOM05D004882 ORTHO05D005551 1.2e-89 335.1 567 42.7
Duzib248G0647 Durio zibethinus HOM05D004882 ORTHO05D005551 1.8e-88 331.3 723 39.0
TWI59G1177 Tripterygium wilfordii HOM05D004882 ORTHO05D005551 1.8e-88 331.3 694 40.2
CANSAT25G1117 Cannabis sativa HOM05D004882 ORTHO05D005551 5.2e-88 329.7 728 36.8
Oeu008559.3 Olea europaea HOM05D004882 ORTHO05D005551 2.0e-87 327.8 728 39.1
Atru.chr5.2156 Acer truncatum HOM05D004882 ORTHO05D005551 3.4e-87 327.0 729 38.4
Migut.B00500 Erythranthe guttata HOM05D004882 ORTHO05D005551 3.4e-87 327.0 623 42.9
Haze_10351 Corylus avellana HOM05D004882 ORTHO05D005551 2.2e-86 324.3 692 40.2
ECA234G1559 Erigeron canadensis HOM05D004882 ORTHO05D005551 2.2e-86 324.3 664 39.3
RcHm_v2.0_Chr6g0246371 Rosa chinensis HOM05D004882 ORTHO05D005551 1.8e-85 321.2 688 38.5
Duzib132G0818 Durio zibethinus HOM05D004882 ORTHO05D005551 4.1e-85 320.1 521 43.2
arahy.Tifrunner.gnm1.ann1.189H81 Arachis hypogaea HOM05D004882 ORTHO05D005551 3.5e-84 317.0 675 38.8
arahy.Tifrunner.gnm1.ann1.6ERH6H Arachis hypogaea HOM05D004882 ORTHO05D005551 6.6e-83 312.8 677 39.3
SalBow6G6879 Salvia bowleyana HOM05D004882 ORTHO05D005551 8.6e-83 312.4 608 41.3
COL.COLO4_17832 Corchorus olitorius HOM05D004882 ORTHO05D005551 1.5e-82 311.6 512 43.9
Lj6g0001174 Lotus japonicus HOM05D004882 ORTHO05D005551 1.5e-82 311.6 716 35.8
Gorai.005G262300 Gossypium raimondii HOM05D004882 ORTHO05D005551 3.3e-82 310.5 659 38.8
Gohir.A03G212800 Gossypium hirsutum HOM05D004882 ORTHO05D005551 6.8e-80 302.8 686 38.3
Sc08g0004240 Simmondsia chinensis HOM05D004882 ORTHO05D005551 1.5e-79 301.6 536 42.2
PGR142G0772 Punica granatum HOM05D004882 ORTHO05D005551 3.4e-79 300.4 694 35.4
Oeu025237.1 Olea europaea HOM05D004882 ORTHO05D005551 7.5e-79 299.3 705 38.0
Lsat_1_v5_gn_5_110520 Lactuca sativa HOM05D004882 ORTHO05D005551 1.7e-78 298.1 658 37.8
AUR62030897 Chenopodium quinoa HOM05D004882 ORTHO05D005551 3.7e-78 297.0 669 37.5
GSVIVG01036969001 Vitis vinifera HOM05D004882 ORTHO05D005551 5.4e-77 293.1 594 39.4
vmacro01917 Vaccinium macrocarpon HOM05D004882 ORTHO05D005551 7.0e-77 292.7 222 71.6
Hund06491 Selenicereus undatus HOM05D004882 ORTHO05D005551 2.3e-75 287.7 689 35.3
Glyma.13G253200 Glycine max HOM05D004882 ORTHO05D005551 5.0e-75 286.6 744 35.5
DCAR_021925 Daucus carota HOM05D004882 ORTHO05D005551 1.9e-74 284.6 452 44.5
AUR62027054 Chenopodium quinoa HOM05D004882 ORTHO05D005551 1.8e-72 278.1 645 36.0
Lalb_Chr18g0060201 Lupinus albus HOM05D004882 ORTHO05D005551 1.8e-72 278.1 780 32.8
Ah.01g024370 Amaranthus hybridus HOM05D004882 ORTHO05D005551 1.2e-71 275.4 721 35.2
PSO017G3844 Papaver somniferum HOM05D004882 ORTHO05D005551 1.2e-71 275.4 720 35.7
AL7G37720 Arabidopsis lyrata HOM05D004882 ORTHO05D005551 2.6e-71 274.2 704 35.7
Gohir.D02G234300 Gossypium hirsutum HOM05D004882 ORTHO05D005551 3.4e-71 273.9 580 38.3
Lj9A340T57 Lonicera japonica HOM05D004882 ORTHO05D005551 3.4e-71 273.9 532 38.5
PSO170G1497 Papaver somniferum HOM05D004882 ORTHO05D005551 2.9e-70 270.8 725 34.8
MBI16_g35720_MAGBIO Magnolia biondii HOM05D004882 ORTHO05D005551 1.1e-69 268.9 725 33.1
Phvul.006G198000 Phaseolus vulgaris HOM05D004882 ORTHO05D005551 1.4e-69 268.5 720 34.0
TPR.G32640 Trifolium pratense HOM05D004882 ORTHO05D005551 1.6e-68 265.0 729 34.2
Carub.0007s2442 Capsella rubella HOM05D004882 ORTHO05D005551 2.7e-68 264.2 702 33.3
A01p20310 Brassica napus HOM05D004882 ORTHO05D005551 3.5e-68 263.8 665 37.1
Sed0010536 Sechium edule HOM05D004882 ORTHO05D005551 1.0e-67 262.3 654 35.2
Ca_00196_v3 Cicer arietinum L. HOM05D004882 ORTHO05D005551 2.3e-67 261.2 725 34.3
Aa31LG2G13080 Aethionema arabicum HOM05D004882 ORTHO05D005551 5.1e-67 260.0 664 35.1
VMungo0540G0872 Vigna mungo HOM05D004882 ORTHO05D005551 5.1e-67 260.0 526 39.9
EL10Ac9g22153 Beta vulgaris HOM05D004882 ORTHO05D005551 6.6e-67 259.6 789 34.6
Medtr2g010490 Medicago truncatula HOM05D004882 ORTHO05D005551 1.5e-66 258.5 792 33.3
Ciclev10030341m.g Citrus clementina HOM05D004882 ORTHO05D005551 4.3e-66 256.9 584 38.2
MELO3C018551.2 Cucumis melo HOM05D004882 ORTHO05D005551 5.6e-66 256.5 800 32.1
Aqoxy5G00818 Aquilegia oxysepala HOM05D004882 ORTHO05D005551 6.2e-65 253.1 809 32.4
CsaV3_7G007510 Cucumis sativus L. HOM05D004882 ORTHO05D005551 1.4e-64 251.9 800 30.4
ClCG02G007390 Citrullus lanatus HOM05D004882 ORTHO05D005551 2.4e-64 251.1 800 30.6
AT4G17000 Arabidopsis thaliana HOM05D004882 ORTHO05D005551 3.1e-64 250.8 692 34.5
BraA01t01961Z Brassica rapa HOM05D004882 ORTHO05D005551 6.8e-64 249.6 659 35.5
BcaC09g50433 Brassica carinata HOM05D004882 ORTHO05D005551 1.2e-63 248.8 662 36.4
BcaNung00137 Brassica carinata HOM05D004882 ORTHO05D005551 3.4e-63 247.3 678 34.5
BolC1t02498H Brassica oleracea HOM05D004882 ORTHO05D005551 5.8e-63 246.5 661 36.2
C01p25470 Brassica napus HOM05D004882 ORTHO05D005551 1.3e-62 245.4 661 36.0
Thhalv10024666m.g Eutrema salsugineum HOM05D004882 ORTHO05D005551 1.9e-61 241.5 689 33.7
TAR381G1068 Trochodendron aralioides HOM05D004882 ORTHO05D005551 7.1e-61 239.6 242 57.4
SGA_v2.0_scaffold32G12966 Striga asiatica HOM05D002023 ORTHO05D002049 1.2e-60 238.8 495 40.2
CARHR223560 Cardamine hirsuta HOM05D004882 ORTHO05D005551 7.8e-60 236.1 683 34.8
Psat1g212160 Pisum sativum HOM05D004882 ORTHO05D005551 5.1e-59 233.4 552 36.6
Sabra09G0063500 Salix brachista HOM05D004882 ORTHO05D005551 5.6e-58 229.9 736 31.7
Sp7g17190 Schrenkiella parvula HOM05D004882 ORTHO05D005551 2.1e-57 228.0 580 34.5
Sabra16G0180100 Salix brachista HOM05D004882 ORTHO05D005551 1.1e-56 225.7 742 32.6
THA.LOC104807193 Tarenaya hassleriana HOM05D004882 ORTHO05D005551 1.2e-55 222.2 661 31.8
BcaB04g18391 Brassica carinata HOM05D004882 ORTHO05D005551 6.6e-51 206.5 678 32.7
unitig_21.g20709 Utricularia gibba HOM05D004882 ORTHO05D005551 6.6e-51 206.5 531 34.3
CDE01G0159 Ceratophyllum demersum HOM05D004882 ORTHO05D005551 8.4e-46 189.5 657 29.4
THA.LOC104819516 Tarenaya hassleriana HOM05D004882 ORTHO05D005551 2.5e-42 177.9 302 39.1
Glyma.15G061700 Glycine max HOM05D004882 ORTHO05D005551 3.7e-41 174.1 642 31.5
CSS0001570 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 4.8e-41 173.7 229 52.8
ATR0739G125 Amborella trichopoda HOM05D004882 ORTHO05D005551 2.2e-38 164.9 746 30.0
Duzib052G0961 Durio zibethinus HOM05D004882 ORTHO05D005551 2.1e-36 158.3 432 36.6
BcaC07g38031 Brassica carinata HOM05D004882 ORTHO05D005551 3.9e-35 154.1 635 28.7
Os03g0770900 Oryza sativa ssp. japonica HOM05D004882 ORTHO05D005551 2.0e-31 141.7 587 30.2
Zm00001eb058870 Zea mays HOM05D004882 ORTHO05D005551 7.9e-28 129.8 509 28.9
Rhsim11G0146600 Rhododendron simsii HOM05D004882 ORTHO05D005551 5.1e-27 127.1 169 49.1
RcHm_v2.0_Chr6g0246451 Rosa chinensis HOM05D004882 ORTHO05D005551 3.3e-26 124.4 97 64.9
Zm00001eb213820 Zea mays HOM05D004882 ORTHO05D005551 3.3e-26 124.4 628 26.4
BcaNung00136 Brassica carinata HOM05D004882 ORTHO05D005551 4.8e-25 120.6 137 51.8
RcHm_v2.0_Chr6g0246631 Rosa chinensis HOM05D004882 ORTHO05D005551 5.0e-22 110.5 117 53.8
vmacro01916 Vaccinium macrocarpon HOM05D004882 ORTHO05D005551 3.7e-17 94.4 127 50.4
HPP92_019572 Vanilla planifolia HOM05D004882 ORTHO05D005551 3.4e-15 87.8 72 61.1
HanXRQChr10g0297671 Helianthus annuus HOM05D004882 ORTHO05D005551 8.5e-14 83.2 398 26.9
Zm00001eb251570 Zea mays HOM05D004882 ORTHO05D005551 1.9e-13 82.0 89 49.4
RcHm_v2.0_Chr6g0246641 Rosa chinensis HOM05D004882 ORTHO05D005551 2.0e-10 72.0 62 58.1
Prupe.8G157000 Prunus persica HOM05D004882 ORTHO05D005551 3.1e-08 64.7 76 52.6
Zm00001eb205120 Zea mays HOM05D004882 ORTHO05D005551 3.1e-08 64.7 101 38.6
Zm00001eb090710 Zea mays HOM05D004882 ORTHO05D005551 2.0e-07 62.0 163 30.7
TAR381G0477 Trochodendron aralioides HOM05D004882 ORTHO05D005551 3.4e-07 61.2 66 57.6
VMungo0647G2224 Vigna mungo HOM05D004882 ORTHO05D005551 5.9e-07 60.5 38 76.3
SHI04902 Sapria himalayana HOM05D004882 ORTHO05D005551 1.0e-06 59.7 45 62.2
BolC8t48423H Brassica oleracea HOM05D004882 ORTHO05D005551 1.7e-06 58.9 41 70.7
Nn5g30227 Nelumbo nucifera HOM05D004882 ORTHO05D005551 2.9e-06 58.2 46 65.2
SEGI_28562 Sequoiadendron giganteum HOM05D004882 ORTHO05D005551 8.5e-06 56.6 46 54.3

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (5 genes)
Brassica napus (2 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (3 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (4 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (5 genes)

Program Settings