Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026736 Camellia sinensis var. sinensis HOM05D004840 ORTHO05D005751 4.8e-171 604.4 295 100.0
Actinidia16825 Actinidia chinensis HOM05D004840 ORTHO05D005751 1.2e-137 493.4 296 82.4
Rhsim07G0191000 Rhododendron simsii HOM05D004840 ORTHO05D005751 9.4e-135 483.8 290 81.0
Dinv40351 Davidia involucrata HOM05D004840 ORTHO05D005751 8.0e-134 480.7 296 80.4
Dinv30826 Davidia involucrata HOM05D004840 ORTHO05D005751 2.3e-133 479.2 295 79.0
GSVIVG01031181001 Vitis vinifera HOM05D004840 ORTHO05D005751 4.2e-127 458.4 293 76.5
TAR636G2597 Trochodendron aralioides HOM05D004840 ORTHO05D005751 2.7e-121 439.1 288 75.3
Nn3g21515 Nelumbo nucifera HOM05D004840 ORTHO05D005751 5.9e-121 438.0 290 74.5
Hma1.2p1_1021F.1_g248650 Hydrangea macrophylla HOM05D004840 ORTHO05D005751 1.3e-120 436.8 291 76.3
Cfa006640 Carpinus fangiana HOM05D004840 ORTHO05D005751 3.3e-119 432.2 290 74.5
Gorai.004G239300 Gossypium raimondii HOM05D004840 ORTHO05D005751 1.6e-118 429.9 289 73.0
Gohir.D08G225300 Gossypium hirsutum HOM05D004840 ORTHO05D005751 3.6e-118 428.7 289 73.0
Thecc.05G314300 Theobroma cacao HOM05D004840 ORTHO05D005751 1.4e-117 426.8 289 73.4
QL03p019896 Quercus lobata HOM05D004840 ORTHO05D005751 2.3e-117 426.0 289 74.4
Gohir.A08G208500 Gossypium hirsutum HOM05D004840 ORTHO05D005751 3.0e-117 425.6 289 72.7
Potri.005G024200 Populus trichocarpa HOM05D004840 ORTHO05D005751 5.7e-116 421.4 297 70.0
Ciclev10002011m.g Citrus clementina HOM05D004840 ORTHO05D005751 7.5e-116 421.0 289 72.3
TAR365G1036 Trochodendron aralioides HOM05D004840 ORTHO05D005751 2.8e-115 419.1 290 72.8
PGSC0003DMG400024721 Solanum tuberosum HOM05D004840 ORTHO05D005751 8.3e-115 417.5 284 71.8
Solyc01g099850.3 Solanum lycopersicum HOM05D004840 ORTHO05D005751 1.1e-114 417.2 291 69.8
Duzib177G0371 Durio zibethinus HOM05D004840 ORTHO05D005751 1.4e-114 416.8 298 71.5
CiPaw.07G022700 Carya illinoinensis HOM05D004840 ORTHO05D005751 5.4e-114 414.8 289 71.6
HanXRQChr11g0339841 Helianthus annuus HOM05D004840 ORTHO05D005751 5.4e-114 414.8 294 70.1
Atru.chr2.82 Acer truncatum HOM05D004840 ORTHO05D005751 1.2e-113 413.7 288 70.5
Peaxi162Scf00037g01328 Petunia axillaris HOM05D004840 ORTHO05D005751 1.6e-113 413.3 288 69.1
Sopen01g043360 Solanum pennellii HOM05D004840 ORTHO05D005751 5.9e-113 411.4 291 69.1
MBI18_g24866_MAGBIO Magnolia biondii HOM05D004840 ORTHO05D005751 2.3e-112 409.5 295 70.2
Cpa.g.sc48.101 Carica papaya HOM05D004840 ORTHO05D005751 3.8e-112 408.7 274 72.6
Oeu012128.1 Olea europaea HOM05D004840 ORTHO05D005751 8.6e-112 407.5 279 72.0
Lsat_1_v5_gn_7_74220 Lactuca sativa HOM05D004840 ORTHO05D005751 1.1e-111 407.1 295 67.8
Aqoxy5G00762 Aquilegia oxysepala HOM05D004840 ORTHO05D005751 2.5e-111 406.0 290 70.0
CAN.G1459.23 Capsicum annuum HOM05D004840 ORTHO05D005751 3.3e-111 405.6 281 70.1
Lj5A372G14 Lonicera japonica HOM05D004840 ORTHO05D005751 4.3e-111 405.2 229 83.0
ECA236G2863 Erigeron canadensis HOM05D004840 ORTHO05D005751 1.2e-110 403.7 286 68.5
TWI36G0513 Tripterygium wilfordii HOM05D004840 ORTHO05D005751 1.2e-110 403.7 287 70.7
Cc02_g34310 Coffea canephora HOM05D004840 ORTHO05D005751 1.6e-110 403.3 302 67.2
Nitab4.5_0000646g0310 Nicotiana tabacum HOM05D004840 ORTHO05D005751 1.6e-110 403.3 276 70.7
Sabra05G0029600 Salix brachista HOM05D004840 ORTHO05D005751 2.8e-110 402.5 274 72.3
Manes.09G171500 Manihot esculenta HOM05D004840 ORTHO05D005751 1.0e-109 400.6 296 68.9
Hund21718 Selenicereus undatus HOM05D004840 ORTHO05D005751 1.0e-109 400.6 298 68.1
Nitab4.5_0002805g0130 Nicotiana tabacum HOM05D000001 ORTHO05D005751 1.4e-109 400.2 280 69.6
SalBow7G2231 Salvia bowleyana HOM05D004840 ORTHO05D005751 1.4e-109 400.2 297 68.0
MSTRG.20411 Avicennia marina HOM05D004840 ORTHO05D005751 1.8e-109 399.8 297 69.0
RcHm_v2.0_Chr3g0456161 Rosa chinensis HOM05D004840 ORTHO05D005751 5.2e-109 398.3 287 67.2
CANSAT54G0531 Cannabis sativa HOM05D004840 ORTHO05D005751 6.8e-109 397.9 283 67.8
SGA_v2.0_scaffold172G38964 Striga asiatica HOM05D004840 ORTHO05D005751 1.2e-108 397.1 295 67.8
TWI56G0640 Tripterygium wilfordii HOM05D004840 ORTHO05D005751 1.3e-107 393.7 286 68.5
FvH4_6g06800 Fragaria vesca HOM05D004840 ORTHO05D005751 1.7e-107 393.3 287 65.9
FAN09G4274 Fragaria x ananassa HOM05D004840 ORTHO05D005751 1.7e-107 393.3 282 66.3
Manes.08G116500 Manihot esculenta HOM05D004840 ORTHO05D005751 2.9e-107 392.5 290 68.6
Sc09g0002890 Simmondsia chinensis HOM05D004840 ORTHO05D005751 6.4e-107 391.3 289 67.1
MD04G1198500 Malus domestica HOM05D004840 ORTHO05D005751 1.1e-106 390.6 282 67.4
Ah.06g189880 Amaranthus hybridus HOM05D004840 ORTHO05D005751 3.2e-106 389.0 294 66.0
MELO3C004220.2 Cucumis melo HOM05D004840 ORTHO05D005751 5.4e-106 388.3 284 69.0
CsaV3_2G006680 Cucumis sativus L. HOM05D004840 ORTHO05D005751 5.4e-106 388.3 288 68.8
Haze_04127 Corylus avellana HOM05D004840 ORTHO05D005751 9.2e-106 387.5 241 76.3
Medtr1g083450 Medicago truncatula HOM05D004840 ORTHO05D005751 9.2e-106 387.5 280 67.1
Potri.013G014800 Populus trichocarpa HOM05D004840 ORTHO05D005751 9.2e-106 387.5 295 65.1
Prupe.6G319500 Prunus persica HOM05D004840 ORTHO05D005751 9.2e-106 387.5 285 66.7
Nitab4.5_0003113g0130 Nicotiana tabacum HOM05D004840 ORTHO05D005751 4.6e-105 385.2 296 63.9
PSO210G5227 Papaver somniferum HOM05D004840 ORTHO05D005751 4.6e-105 385.2 284 66.9
TPR.G17703 Trifolium pratense HOM05D004840 ORTHO05D005751 4.6e-105 385.2 280 68.2
Ca_10143_v3 Cicer arietinum L. HOM05D004840 ORTHO05D005751 6.0e-105 384.8 280 67.1
DCAR_003366 Daucus carota HOM05D004840 ORTHO05D005751 1.3e-104 383.6 287 65.5
FAN09G2143 Fragaria x ananassa HOM05D004840 ORTHO05D005751 1.3e-104 383.6 296 63.9
Sed0004465 Sechium edule HOM05D004840 ORTHO05D005751 1.1e-103 380.6 286 67.5
Sabra13G0012700 Salix brachista HOM05D004840 ORTHO05D005751 2.5e-103 379.4 284 68.3
ClCG02G015400 Citrullus lanatus HOM05D004840 ORTHO05D005751 3.3e-103 379.0 272 70.6
Oeu010923.1 Olea europaea HOM05D004840 ORTHO05D005751 7.3e-103 377.9 259 71.0
FAN02G2387 Fragaria x ananassa HOM05D004840 ORTHO05D005751 1.6e-102 376.7 296 63.2
Psat6g150960 Pisum sativum HOM05D004840 ORTHO05D005751 1.6e-102 376.7 280 66.1
Lalb_Chr02g0148061 Lupinus albus HOM05D004840 ORTHO05D005751 2.1e-102 376.3 276 65.9
arahy.Tifrunner.gnm1.ann1.GZI5BF Arachis hypogaea HOM05D004840 ORTHO05D005751 2.8e-102 375.9 287 65.2
Lj5g0001629 Lotus japonicus HOM05D004840 ORTHO05D005751 6.2e-102 374.8 271 67.9
EL10Ac4g09901 Beta vulgaris HOM05D004840 ORTHO05D005751 1.4e-101 373.6 299 62.9
COL.COLO4_10535 Corchorus olitorius HOM05D004840 ORTHO05D005751 1.8e-101 373.2 245 71.4
Phvul.007G197800 Phaseolus vulgaris HOM05D004840 ORTHO05D005751 1.5e-100 370.2 277 65.7
VMungo0720G2003 Vigna mungo HOM05D004840 ORTHO05D005751 1.7e-99 366.7 276 66.3
Glyma.10G150900 Glycine max HOM05D004840 ORTHO05D005751 6.4e-99 364.8 259 68.0
arahy.Tifrunner.gnm1.ann1.X9MLMM Arachis hypogaea HOM05D004840 ORTHO05D005751 4.1e-98 362.1 313 60.1
PGR031G0640 Punica granatum HOM05D004840 ORTHO05D005751 1.2e-97 360.5 272 64.3
Gohir.D08G225400 Gossypium hirsutum HOM05D004840 ORTHO05D005751 1.3e-96 357.1 245 70.6
Eucgr.H04546 Eucalyptus grandis HOM05D004840 ORTHO05D005751 3.6e-94 349.0 287 62.4
Zm00001eb183580 Zea mays HOM05D004840 ORTHO05D005751 1.5e-92 343.6 276 60.5
Os02g0592500 Oryza sativa ssp. japonica HOM05D004840 ORTHO05D005751 2.6e-92 342.8 260 62.3
CDE02G2578 Ceratophyllum demersum HOM05D004840 ORTHO05D005751 3.4e-92 342.4 294 61.6
HPP92_010680 Vanilla planifolia HOM05D004840 ORTHO05D005751 8.3e-91 337.8 277 62.5
SHI18096 Sapria himalayana HOM05D004840 ORTHO05D005751 9.2e-90 334.3 251 62.9
ATR0796G269 Amborella trichopoda HOM05D004840 ORTHO05D005751 3.0e-88 329.3 282 58.5
Migut.B01018 Erythranthe guttata HOM05D004840 ORTHO05D005751 3.0e-88 329.3 273 61.9
AUR62000745 Chenopodium quinoa HOM05D004840 ORTHO05D005751 6.2e-86 321.6 241 67.2
AUR62005219 Chenopodium quinoa HOM05D004840 ORTHO05D005751 2.1e-81 306.6 265 60.4
SEGI_16961 Sequoiadendron giganteum HOM05D004840 ORTHO05D005751 4.4e-76 288.9 277 49.8
AL6G39110 Arabidopsis lyrata HOM05D004840 ORTHO05D005751 2.4e-74 283.1 268 54.1
AT5G27830 Arabidopsis thaliana HOM05D004840 ORTHO05D005751 9.3e-74 281.2 265 52.8
Sp2g20950 Schrenkiella parvula HOM05D004840 ORTHO05D005751 1.0e-72 277.7 267 51.7
Carub.0006s2475 Capsella rubella HOM05D004840 ORTHO05D005751 6.6e-72 275.0 265 51.3
A09p05450 Brassica napus HOM05D004840 ORTHO05D005751 8.7e-72 274.6 249 54.2
BcaC04g23645 Brassica carinata HOM05D004840 ORTHO05D005751 1.9e-71 273.5 267 51.7
C09p05910 Brassica napus HOM05D004840 ORTHO05D005751 1.9e-71 273.5 267 51.7
BcaB04g19688 Brassica carinata HOM05D004840 ORTHO05D005751 2.5e-71 273.1 251 53.4
Gorai.004G239400 Gossypium raimondii HOM05D004840 ORTHO05D005751 3.3e-71 272.7 268 57.8
C07p41150 Brassica napus HOM05D004840 ORTHO05D005751 5.6e-71 271.9 266 50.8
A06p37310 Brassica napus HOM05D004840 ORTHO05D005751 7.3e-71 271.6 258 51.6
BolC9t53517H Brassica oleracea HOM05D004840 ORTHO05D005751 9.6e-71 271.2 274 51.5
unitig_37.g12625 Utricularia gibba HOM05D004840 ORTHO05D005751 1.3e-70 270.8 255 52.5
BraA09t36183Z Brassica rapa HOM05D004840 ORTHO05D005751 2.1e-70 270.0 275 51.6
BcaNung04748 Brassica carinata HOM05D004840 ORTHO05D005751 2.8e-70 269.6 278 50.7
BolC7t44643H Brassica oleracea HOM05D004840 ORTHO05D005751 4.8e-70 268.9 267 50.9
Aa31LG11G9580 Aethionema arabicum HOM05D004840 ORTHO05D005751 1.1e-69 267.7 250 51.6
CARHR186320 Cardamine hirsuta HOM05D004840 ORTHO05D005751 9.0e-69 264.6 266 50.0
Thhalv10004669m.g Eutrema salsugineum HOM05D004840 ORTHO05D005751 2.0e-68 263.5 270 49.6
THA.LOC104821728 Tarenaya hassleriana HOM05D004840 ORTHO05D005751 4.2e-66 255.8 273 49.1
Glyma.20G237300 Glycine max HOM05D004840 ORTHO05D005751 5.4e-66 255.4 277 52.7
Mapoly0073s0083 Marchantia polymorpha HOM05D004840 ORTHO05D005751 7.6e-60 235.0 289 42.2
CARHR079990 Cardamine hirsuta HOM05D004840 ORTHO05D005751 1.4e-50 204.1 244 43.4
CBR_g12354 Chara braunii HOM05D004840 ORTHO05D005751 1.8e-48 197.2 282 39.4
Sp3g04440 Schrenkiella parvula HOM05D004840 ORTHO05D005751 2.5e-47 193.4 248 44.4
CARHR080000 Cardamine hirsuta HOM05D004840 ORTHO05D005751 7.4e-47 191.8 201 48.8
AL3G16200 Arabidopsis lyrata HOM05D004840 ORTHO05D005751 1.2e-44 184.5 222 44.6
SMO351G0431 Selaginella moellendorffii HOM05D004840 ORTHO05D005751 4.5e-44 182.6 267 36.7
Actinidia35548 Actinidia chinensis HOM05D004840 ORTHO05D005751 1.0e-40 171.4 213 46.9
BcaB04g21439 Brassica carinata HOM05D004840 ORTHO05D005751 2.2e-38 163.7 199 47.7
BcaC09g47836 Brassica carinata HOM05D004840 ORTHO05D005751 6.3e-38 162.2 276 40.2
BcaC05g30108 Brassica carinata HOM05D004840 ORTHO05D005751 2.4e-37 160.2 240 40.8
BolC1t05686H Brassica oleracea HOM05D004840 ORTHO05D005751 5.3e-37 159.1 204 46.6
BraA01t04479Z Brassica rapa HOM05D004840 ORTHO05D005751 5.3e-37 159.1 175 46.9
C05p61640 Brassica napus HOM05D004840 ORTHO05D005751 3.4e-36 156.4 240 40.0
BcaB04g21445 Brassica carinata HOM05D004840 ORTHO05D005751 4.5e-36 156.0 179 47.5
BcaC09g47835 Brassica carinata HOM05D004840 ORTHO05D005751 5.9e-36 155.6 243 40.3
BolC5t34822H Brassica oleracea HOM05D004840 ORTHO05D005751 2.2e-35 153.7 198 45.5
BcaC09g47832 Brassica carinata HOM05D004840 ORTHO05D005751 3.8e-35 152.9 204 46.6
BraA01t03309Z Brassica rapa HOM05D004840 ORTHO05D005751 1.9e-34 150.6 251 37.8
A01p31830 Brassica napus HOM05D004840 ORTHO05D005751 3.0e-32 143.3 143 50.3
BolC1t05687H Brassica oleracea HOM05D004840 ORTHO05D005751 9.7e-31 138.3 269 36.8
BraA01t04480Z Brassica rapa HOM05D004840 ORTHO05D005751 2.8e-30 136.7 209 41.6
BraA01t03307Z Brassica rapa HOM05D004840 ORTHO05D005751 5.3e-29 132.5 143 49.0
CARHR182590 Cardamine hirsuta HOM05D004840 ORTHO05D005751 1.2e-28 131.3 140 45.0
BcaC09g47833 Brassica carinata HOM05D004840 ORTHO05D005751 2.6e-23 113.6 204 39.7
BcaC09g47834 Brassica carinata HOM05D004840 ORTHO05D005751 2.6e-23 113.6 204 39.7
MCO15G505 Micromonas commoda HOM05D004840 ORTHO05D005751 9.7e-23 111.7 192 36.5
PRCOL_00005226 Prasinoderma coloniale HOM05D004840 ORTHO05D005751 3.7e-22 109.8 173 35.8
RcHm_v2.0_Chr2g0123281 Rosa chinensis HOM05D004840 ORTHO05D005751 1.3e-19 101.3 93 53.8
BcaC03g13846 Brassica carinata HOM05D004840 ORTHO05D005751 8.0e-17 92.0 64 60.9
BolC2t07120H Brassica oleracea HOM05D004840 ORTHO05D005751 8.0e-17 92.0 64 60.9
Duzib128G0694 Durio zibethinus HOM05D004840 ORTHO05D005751 3.4e-15 86.7 68 60.3
BraA05t22958Z Brassica rapa HOM05D004840 ORTHO05D005751 9.7e-15 85.1 148 39.9
Nitab4.5_0007800g0020 Nicotiana tabacum HOM05D004840 ORTHO05D005751 4.8e-14 82.8 100 46.0

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (12 genes)
Brassica napus (6 genes)
Brassica oleracea (6 genes)
Brassica rapa (6 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (4 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (4 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings