Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025851 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 8.9e-176 620.2 312 100.0
CSS0047507 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 6.5e-126 454.5 361 69.5
CSS0021148 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 7.2e-101 371.3 377 56.0
Rhsim06G0223700 Rhododendron simsii HOM05D005375 ORTHO05D006598 1.1e-96 357.5 374 56.4
Thecc.07G027900 Theobroma cacao HOM05D005375 ORTHO05D006598 1.1e-96 357.5 390 54.1
CSS0031566 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 1.4e-96 357.1 414 51.0
Nitab4.5_0005078g0020 Nicotiana tabacum HOM05D005375 ORTHO05D006598 1.8e-96 356.7 380 54.5
Nitab4.5_0004445g0070 Nicotiana tabacum HOM05D005375 ORTHO05D006598 3.1e-96 355.9 380 54.7
Dinv22229 Davidia involucrata HOM05D005375 ORTHO05D006598 4.1e-96 355.5 373 56.8
Ca_06349_v3 Cicer arietinum L. HOM05D005375 ORTHO05D006598 2.0e-95 353.2 308 64.3
PGSC0003DMG400022298 Solanum tuberosum HOM05D005375 ORTHO05D006598 2.2e-94 349.7 386 52.3
MSTRG.6961 Avicennia marina HOM05D005375 ORTHO05D006598 3.8e-94 349.0 386 53.9
Nitab4.5_0001160g0010 Nicotiana tabacum HOM05D005375 ORTHO05D006598 3.8e-94 349.0 405 50.4
Manes.03G136300 Manihot esculenta HOM05D005375 ORTHO05D006598 4.2e-93 345.5 392 52.0
CAN.G337.55 Capsicum annuum HOM05D005375 ORTHO05D006598 2.3e-91 339.7 412 48.8
SGA_v2.0_scaffold8G04388 Striga asiatica HOM05D005375 ORTHO05D006598 8.8e-91 337.8 389 50.6
Lj1C881T5 Lonicera japonica HOM05D005375 ORTHO05D006598 1.2e-90 337.4 389 52.4
Sopen07g033190 Solanum pennellii HOM05D005375 ORTHO05D006598 1.5e-90 337.0 381 51.7
Gohir.A04G011700 Gossypium hirsutum HOM05D005375 ORTHO05D006598 2.6e-90 336.3 398 51.0
TAR627G0180 Trochodendron aralioides HOM05D005375 ORTHO05D006598 3.4e-90 335.9 405 50.4
Nitab4.5_0007749g0010 Nicotiana tabacum HOM05D005375 ORTHO05D006598 5.7e-90 335.1 406 49.0
Migut.M01705 Erythranthe guttata HOM05D005375 ORTHO05D006598 7.5e-90 334.7 385 52.7
COL.COLO4_09738 Corchorus olitorius HOM05D005375 ORTHO05D006598 1.7e-89 333.6 406 48.5
Duzib170G0122 Durio zibethinus HOM05D005375 ORTHO05D006598 2.2e-89 333.2 387 51.9
Gorai.009G443800 Gossypium raimondii HOM05D005375 ORTHO05D006598 2.2e-89 333.2 398 50.8
Cc05_g14340 Coffea canephora HOM05D005375 ORTHO05D006598 3.7e-89 332.4 409 49.6
Gohir.D05G374900 Gossypium hirsutum HOM05D005375 ORTHO05D006598 1.1e-88 330.9 398 50.3
TAR629G0374 Trochodendron aralioides HOM05D005375 ORTHO05D006598 1.1e-88 330.9 359 55.4
Duzib268G0742 Durio zibethinus HOM05D005375 ORTHO05D006598 1.8e-88 330.1 389 51.9
vmacro22307 Vaccinium macrocarpon HOM05D005375 ORTHO05D006598 1.8e-88 330.1 426 49.1
Dinv40796 Davidia involucrata HOM05D005375 ORTHO05D006598 4.1e-88 328.9 405 51.4
Ciclev10008309m.g Citrus clementina HOM05D005375 ORTHO05D006598 7.0e-88 328.2 413 49.4
TWI38G0072 Tripterygium wilfordii HOM05D005375 ORTHO05D006598 7.0e-88 328.2 400 50.0
MSTRG.12999 Avicennia marina HOM05D005375 ORTHO05D006598 2.0e-87 326.6 387 50.6
Cfa020276 Carpinus fangiana HOM05D005375 ORTHO05D006598 1.1e-85 320.9 419 48.2
ECA240G0086 Erigeron canadensis HOM05D005375 ORTHO05D006598 1.5e-85 320.5 398 50.3
Peaxi162Scf00235g00721 Petunia axillaris HOM05D005375 ORTHO05D006598 1.9e-85 320.1 409 48.2
Aqoxy1G04123 Aquilegia oxysepala HOM05D005375 ORTHO05D006598 3.2e-85 319.3 409 47.7
HanXRQChr03g0076881 Helianthus annuus HOM05D005375 ORTHO05D006598 9.5e-85 317.8 396 50.3
AUR62020339 Chenopodium quinoa HOM05D005375 ORTHO05D006598 3.6e-84 315.8 403 47.9
MD03G1294800 Malus domestica HOM05D005375 ORTHO05D006598 4.7e-84 315.5 411 48.7
Solyc07g064980.3 Solanum lycopersicum HOM05D005375 ORTHO05D006598 4.7e-84 315.5 385 49.9
AUR62015884 Chenopodium quinoa HOM05D005375 ORTHO05D006598 6.1e-84 315.1 410 47.1
HanXRQChr13g0408271 Helianthus annuus HOM05D005375 ORTHO05D006598 8.0e-84 314.7 405 48.6
Potri.011G082000 Populus trichocarpa HOM05D005375 ORTHO05D006598 4.0e-83 312.4 405 47.4
Glyma.14G018200 Glycine max HOM05D005375 ORTHO05D006598 1.2e-82 310.8 458 44.1
ClCG10G005050 Citrullus lanatus HOM05D005375 ORTHO05D006598 4.4e-82 308.9 423 46.8
MD00G1179000 Malus domestica HOM05D005375 ORTHO05D006598 4.4e-82 308.9 411 47.7
Gohir.A01G084800 Gossypium hirsutum HOM05D005375 ORTHO05D006598 1.3e-81 307.4 389 49.4
Phvul.008G272700 Phaseolus vulgaris HOM05D005375 ORTHO05D006598 2.8e-81 306.2 449 44.3
QL08p007584 Quercus lobata HOM05D005375 ORTHO05D006598 3.7e-81 305.8 408 48.0
CsaV3_3G004730 Cucumis sativus L. HOM05D005375 ORTHO05D006598 8.3e-81 304.7 391 49.1
Migut.H01791 Erythranthe guttata HOM05D005375 ORTHO05D006598 8.3e-81 304.7 338 53.3
Glyma.02G295200 Glycine max HOM05D005375 ORTHO05D006598 1.1e-80 304.3 440 45.5
Gohir.D01G071200 Gossypium hirsutum HOM05D005375 ORTHO05D006598 1.4e-80 303.9 389 49.4
unitig_747.g21591 Utricularia gibba HOM05D005375 ORTHO05D006598 2.4e-80 303.1 396 48.5
EL10Ac4g07689 Beta vulgaris HOM05D005375 ORTHO05D006598 1.2e-79 300.8 418 45.2
Sabra11G0065600 Salix brachista HOM05D005375 ORTHO05D006598 1.6e-79 300.4 432 44.2
Gorai.002G093900 Gossypium raimondii HOM05D005375 ORTHO05D006598 2.7e-79 299.7 389 48.6
Sed0014032 Sechium edule HOM05D005375 ORTHO05D006598 1.3e-78 297.4 390 47.4
LjContig00272g0009776 Lotus japonicus HOM05D005375 ORTHO05D006598 1.7e-78 297.0 447 43.8
Lj8A173T72 Lonicera japonica HOM05D005375 ORTHO05D006598 3.8e-78 295.8 266 64.3
Eucgr.F03508 Eucalyptus grandis HOM05D005375 ORTHO05D006598 1.1e-77 294.3 445 43.1
Hma1.2p1_1332F.1_g276150 Hydrangea macrophylla HOM05D005375 ORTHO05D006598 1.1e-77 294.3 397 47.9
RcHm_v2.0_Chr7g0241441 Rosa chinensis HOM05D005375 ORTHO05D006598 3.3e-77 292.7 444 43.7
Prupe.8G266900 Prunus persica HOM05D005375 ORTHO05D006598 5.6e-77 292.0 407 47.7
DCAR_022591 Daucus carota HOM05D005375 ORTHO05D006598 7.3e-77 291.6 400 45.8
FAN13G1970 Fragaria x ananassa HOM05D005375 ORTHO05D006598 9.5e-77 291.2 444 43.2
Atru.chr2.3553 Acer truncatum HOM05D005375 ORTHO05D006598 3.6e-76 289.3 392 46.4
FAN18G4382 Fragaria x ananassa HOM05D005375 ORTHO05D006598 6.1e-76 288.5 445 42.7
FAN04G2161 Fragaria x ananassa HOM05D005375 ORTHO05D006598 1.4e-75 287.3 444 42.3
Atru.chr2.3534 Acer truncatum HOM05D005375 ORTHO05D006598 3.0e-75 286.2 400 45.5
FvH4_5g39180 Fragaria vesca HOM05D005375 ORTHO05D006598 4.0e-75 285.8 445 42.5
FAN08G1518 Fragaria x ananassa HOM05D005375 ORTHO05D006598 4.0e-75 285.8 445 42.5
VMungo0647G1984 Vigna mungo HOM05D005375 ORTHO05D006598 6.8e-75 285.0 468 41.9
PGR031G3708 Punica granatum HOM05D005375 ORTHO05D006598 2.0e-74 283.5 426 44.4
CiPaw.11G194800 Carya illinoinensis HOM05D005375 ORTHO05D006598 9.8e-74 281.2 406 45.6
Sp7g24730 Schrenkiella parvula HOM05D005375 ORTHO05D006598 2.2e-73 280.0 387 46.8
Psat2g009920 Pisum sativum HOM05D005375 ORTHO05D006598 2.9e-73 279.6 470 40.9
Nn1g07350 Nelumbo nucifera HOM05D005375 ORTHO05D006598 6.4e-73 278.5 416 44.5
Lsat_1_v5_gn_9_90720 Lactuca sativa HOM05D005375 ORTHO05D006598 1.1e-72 277.7 412 46.1
Medtr5g093880 Medicago truncatula HOM05D005375 ORTHO05D006598 3.2e-72 276.2 460 42.2
THA.LOC104811633 Tarenaya hassleriana HOM05D005375 ORTHO05D006598 4.1e-72 275.8 375 48.0
TPR.G35360 Trifolium pratense HOM05D005375 ORTHO05D006598 1.6e-71 273.9 478 40.4
PSO210G0227 Papaver somniferum HOM05D005375 ORTHO05D006598 2.7e-71 273.1 424 42.2
AL7G26080 Arabidopsis lyrata HOM05D005375 ORTHO05D006598 4.6e-71 272.3 385 45.2
BolC1t02212H Brassica oleracea HOM05D005375 ORTHO05D006598 4.6e-71 272.3 389 44.7
PSO302G0025 Papaver somniferum HOM05D005375 ORTHO05D006598 1.0e-70 271.2 422 41.9
MELO3C014172.2 Cucumis melo HOM05D005375 ORTHO05D006598 1.3e-70 270.8 395 45.6
Carub.0007s1409 Capsella rubella HOM05D005375 ORTHO05D006598 3.0e-70 269.6 391 44.5
Thhalv10025139m.g Eutrema salsugineum HOM05D005375 ORTHO05D006598 3.0e-70 269.6 394 44.9
Lj6g0028194 Lotus japonicus HOM05D005375 ORTHO05D006598 8.6e-70 268.1 429 42.2
AT4G26750 Arabidopsis thaliana HOM05D005375 ORTHO05D006598 1.5e-69 267.3 385 46.8
CDE04G3304 Ceratophyllum demersum HOM05D005375 ORTHO05D006598 5.6e-69 265.4 360 45.8
Lalb_Chr04g0248131 Lupinus albus HOM05D005375 ORTHO05D006598 1.2e-68 264.2 474 40.1
CARHR234370 Cardamine hirsuta HOM05D005375 ORTHO05D006598 2.8e-68 263.1 402 44.0
ATR1101G026 Amborella trichopoda HOM05D005375 ORTHO05D006598 3.1e-67 259.6 382 44.8
BraA01t01755Z Brassica rapa HOM05D000504 ORTHO05D000403 1.5e-66 257.3 388 43.6
A01p18000 Brassica napus HOM05D000504 ORTHO05D000403 2.0e-66 256.9 388 44.6
Oeu054311.1 Olea europaea HOM05D005375 ORTHO05D006598 2.6e-66 256.5 399 43.6
C01p22820 Brassica napus HOM05D000504 ORTHO05D006598 4.4e-66 255.8 388 44.3
CANSAT11G2127 Cannabis sativa HOM05D005375 ORTHO05D006598 1.3e-65 254.2 417 42.4
Os06g0308800 Oryza sativa ssp. japonica HOM05D005375 ORTHO05D006598 1.3e-65 254.2 454 37.4
Aa31LG5G12180 Aethionema arabicum HOM05D005375 ORTHO05D006598 2.4e-64 250.0 410 40.7
CDE07G0643 Ceratophyllum demersum HOM05D005375 ORTHO05D006598 4.1e-64 249.2 391 43.2
DCAR_016648 Daucus carota HOM05D005375 ORTHO05D006598 6.6e-62 241.9 449 38.8
Zm00001eb281230 Zea mays HOM05D005375 ORTHO05D006598 4.3e-61 239.2 438 37.7
PGR031G2801 Punica granatum HOM05D005375 ORTHO05D006598 5.6e-61 238.8 306 49.7
SEGI_32868 Sequoiadendron giganteum HOM05D005375 ORTHO05D006598 3.6e-60 236.1 459 39.9
Actinidia05060 Actinidia chinensis HOM05D005375 ORTHO05D006598 6.2e-60 235.3 367 44.1
SMO271G0101 Selaginella moellendorffii HOM05D005375 ORTHO05D006598 4.0e-59 232.6 387 40.6
Cpa.g.sc284.2 Carica papaya HOM05D005375 ORTHO05D006598 1.4e-56 224.2 136 82.4
GSVIVG01037729001 Vitis vinifera HOM05D005375 ORTHO05D006598 1.4e-56 224.2 241 56.0
Sc16g0005720 Simmondsia chinensis HOM05D005375 ORTHO05D006598 1.6e-55 220.7 300 44.7
HPP92_015778 Vanilla planifolia HOM05D005375 ORTHO05D006598 7.8e-55 218.4 222 57.7
Lalb_Chr00c48g0412951 Lupinus albus HOM05D005375 ORTHO05D006598 1.0e-54 218.0 133 82.0
BcaC09g52262 Brassica carinata HOM05D005375 ORTHO05D006598 2.8e-52 209.9 351 40.7
TAR624G1027 Trochodendron aralioides HOM05D005375 ORTHO05D006598 1.1e-51 208.0 137 77.4
Mapoly0043s0080 Marchantia polymorpha HOM05D005375 ORTHO05D006598 3.5e-47 193.0 238 50.0
Pp3c12_1420 Physcomitrium patens HOM05D005375 ORTHO05D006598 1.3e-46 191.0 426 33.8
AagrBONN_evm.TU.Sc2ySwM_368.1760 Anthoceros agrestis HOM05D005375 ORTHO05D006598 7.3e-45 185.3 357 36.7
Haze_09747 Corylus avellana HOM05D005375 ORTHO05D006598 4.7e-44 182.6 376 37.5
Actinidia37374 Actinidia chinensis HOM05D005375 ORTHO05D006598 8.4e-41 171.8 199 52.8
TWI39G0687 Tripterygium wilfordii HOM05D005375 ORTHO05D006598 1.4e-35 154.5 96 80.2
CBR_g50394 Chara braunii HOM05D005375 ORTHO05D006598 5.3e-35 152.5 399 32.3
SHI26566 Sapria himalayana HOM05D005375 ORTHO05D006598 1.2e-34 151.4 408 31.9
Nn1g03334 Nelumbo nucifera HOM05D005375 ORTHO05D006598 1.3e-33 147.9 312 38.1
Actinidia20957 Actinidia chinensis HOM05D005375 ORTHO05D006598 5.6e-29 132.5 97 70.1
Lalb_Chr00c48g0413001 Lupinus albus HOM05D005375 ORTHO05D006598 9.6e-29 131.7 133 57.1
Cre03.g145227 Chlamydomonas reinhardtii HOM05D005375 ORTHO05D006598 2.9e-25 120.2 128 50.8
Actinidia32285 Actinidia chinensis HOM05D005375 ORTHO05D006598 6.0e-23 112.5 133 51.1
Zm00001eb381490 Zea mays HOM05D005375 ORTHO05D006598 1.3e-22 111.3 129 53.5
PRCOL_00004002 Prasinoderma coloniale HOM05D005375 ORTHO05D006598 2.3e-22 110.5 287 33.1
MCO03G124 Micromonas commoda HOM05D005375 ORTHO05D006598 2.1e-20 104.0 279 30.8
TAR624G1433 Trochodendron aralioides HOM05D005375 ORTHO05D006598 2.8e-20 103.6 135 48.1
Hund23196 Selenicereus undatus HOM05D005375 ORTHO05D006598 2.6e-18 97.1 97 56.7
CAN.G396.4 Capsicum annuum HOM05D005375 ORTHO05D006598 1.9e-16 90.9 103 49.5
CAN.G4023.1 Capsicum annuum HOM05D005375 ORTHO05D006598 1.9e-16 90.9 103 49.5
PGR044G1312 Punica granatum HOM05D003929 ORTHO05D004499 1.3e-14 84.7 49 79.6
C08p09960 Brassica napus HOM05D000504 ORTHO05D000403 5.7e-13 79.3 90 47.8
BolC8t48673H Brassica oleracea HOM05D000504 ORTHO05D000403 5.7e-13 79.3 90 47.8
BcaC07g38248 Brassica carinata HOM05D005375 ORTHO05D006598 6.3e-12 75.9 90 45.6
CAN.G396.14 Capsicum annuum HOM05D005375 ORTHO05D006598 1.4e-11 74.7 50 66.0
vmacro14248 Vaccinium macrocarpon HOM05D005375 ORTHO05D426817 7.9e-07 58.9 40 77.5

Acer truncatum (2 genes)
Actinidia chinensis (4 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (0 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (4 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (2 genes)
Lupinus albus (3 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (3 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (4 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings