Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025307 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 0.0e+00 1702.6 877 100.0
CSS0048591 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 0.0e+00 1700.3 877 99.9
Dinv42121 Davidia involucrata HOM05D006129 ORTHO05D007446 0.0e+00 1231.1 805 78.5
Actinidia12976 Actinidia chinensis HOM05D006129 ORTHO05D007446 0.0e+00 1171.8 818 75.1
GSVIVG01031785001 Vitis vinifera HOM05D006129 ORTHO05D007446 0.0e+00 1162.1 804 72.1
Rhsim11G0169300 Rhododendron simsii HOM05D006129 ORTHO05D007446 0.0e+00 1141.7 848 71.1
vmacro02172 Vaccinium macrocarpon HOM05D006129 ORTHO05D007446 0.0e+00 1139.0 777 74.9
QL11p038411 Quercus lobata HOM05D006129 ORTHO05D007446 0.0e+00 1137.1 838 69.3
Dinv23594 Davidia involucrata HOM05D006129 ORTHO05D007446 0.0e+00 1130.2 809 72.7
Haze_01881 Corylus avellana HOM05D006129 ORTHO05D007446 0.0e+00 1126.7 822 69.3
Lj5P206T15 Lonicera japonica HOM05D006129 ORTHO05D007446 0.0e+00 1124.0 805 71.9
Cfa005424 Carpinus fangiana HOM05D006129 ORTHO05D007446 0.0e+00 1119.4 823 69.0
Duzib248G0151 Durio zibethinus HOM05D006129 ORTHO05D007446 0.0e+00 1116.7 840 69.2
CiPaw.05G055300 Carya illinoinensis HOM05D006129 ORTHO05D007446 0.0e+00 1114.8 841 68.5
Thecc.02G095400 Theobroma cacao HOM05D006129 ORTHO05D007446 0.0e+00 1101.7 833 68.2
Nn4g23272 Nelumbo nucifera HOM05D006129 ORTHO05D007446 0.0e+00 1091.3 811 68.7
TWI79G0519 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 0.0e+00 1090.9 788 70.1
TWI31G0609 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 0.0e+00 1083.6 800 69.5
MD10G1089000 Malus domestica HOM05D006129 ORTHO05D007446 0.0e+00 1076.2 834 66.9
Cpa.g.sc62.53 Carica papaya HOM05D006129 ORTHO05D007446 5.4e-311 1070.8 852 66.0
COL.COLO4_11724 Corchorus olitorius HOM05D006129 ORTHO05D007446 2.6e-310 1068.5 731 72.2
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 1.4e-306 1056.2 796 66.6
Prupe.8G116000 Prunus persica HOM05D006129 ORTHO05D007446 1.1e-303 1046.6 780 68.3
MELO3C026699.2 Cucumis melo HOM05D006129 ORTHO05D007446 2.4e-303 1045.4 797 65.4
Gohir.D01G006000 Gossypium hirsutum HOM05D006129 ORTHO05D007446 1.2e-302 1043.1 801 67.0
RcHm_v2.0_Chr6g0259211 Rosa chinensis HOM05D006129 ORTHO05D007446 2.0e-302 1042.3 774 67.7
CANSAT25G2181 Cannabis sativa HOM05D006129 ORTHO05D007446 3.5e-302 1041.6 838 63.0
Manes.17G094600 Manihot esculenta HOM05D006129 ORTHO05D007446 7.8e-302 1040.4 844 64.1
TAR371G0476 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.7e-301 1039.3 737 72.9
Ciclev10027854m.g Citrus clementina HOM05D006129 ORTHO05D007446 2.9e-301 1038.5 793 67.0
Gohir.A01G005900 Gossypium hirsutum HOM05D006129 ORTHO05D007446 1.5e-300 1036.2 799 66.6
Gorai.002G007000 Gossypium raimondii HOM05D006129 ORTHO05D007446 1.9e-300 1035.8 801 66.5
Potri.009G106800 Populus trichocarpa HOM05D006129 ORTHO05D007446 4.3e-300 1034.6 837 65.5
Atru.BG.82.p Acer truncatum HOM05D006129 ORTHO05D007446 1.8e-298 1029.2 659 74.1
CsaV3_3G028800 Cucumis sativus L. HOM05D006129 ORTHO05D007446 2.2e-296 1022.3 799 64.2
FAN27G0179 Fragaria x ananassa HOM05D006129 ORTHO05D007446 7.0e-295 1017.3 777 66.0
Sed0004701 Sechium edule HOM05D006129 ORTHO05D007446 1.7e-293 1012.7 784 64.5
FvH4_2g06900 Fragaria vesca HOM05D006129 ORTHO05D007446 3.9e-293 1011.5 757 66.3
DCAR_003623 Daucus carota HOM05D006129 ORTHO05D007446 2.5e-292 1008.8 774 66.3
Aqoxy3G03484 Aquilegia oxysepala HOM05D006129 ORTHO05D007446 3.3e-292 1008.4 777 65.0
Oeu057674.1 Olea europaea HOM05D006129 ORTHO05D007446 8.0e-291 1003.8 730 68.8
FAN15G2181 Fragaria x ananassa HOM05D006129 ORTHO05D007446 4.0e-290 1001.5 773 65.2
FAN24G2628 Fragaria x ananassa HOM05D006129 ORTHO05D007446 5.2e-290 1001.1 757 65.7
Lalb_Chr10g0095451 Lupinus albus HOM05D006129 ORTHO05D007446 4.4e-289 998.0 700 68.7
Peaxi162Scf00789g00530 Petunia axillaris HOM05D006129 ORTHO05D007446 2.2e-288 995.7 797 63.7
Nitab4.5_0007303g0010 Nicotiana tabacum HOM05D006129 ORTHO05D007446 1.1e-284 983.4 803 63.3
Eucgr.L01320 Eucalyptus grandis HOM05D006129 ORTHO05D007446 1.5e-284 983.0 803 64.1
Nitab4.5_0001453g0090 Nicotiana tabacum HOM05D006129 ORTHO05D007446 4.3e-284 981.5 829 61.8
Lj2g0010354 Lotus japonicus HOM05D006129 ORTHO05D007446 8.1e-283 977.2 705 67.9
PGR042G1055 Punica granatum HOM05D006129 ORTHO05D007446 1.8e-282 976.1 806 62.3
Lsat_1_v5_gn_5_113460 Lactuca sativa HOM05D006129 ORTHO05D007446 4.4e-281 971.5 821 61.5
Ca_13480_v3 Cicer arietinum L. HOM05D006129 ORTHO05D007446 5.8e-281 971.1 706 67.1
Sc08g0000140 Simmondsia chinensis HOM05D006129 ORTHO05D007446 2.9e-280 968.8 782 63.4
Solyc11g066850.3 Solanum lycopersicum HOM05D006129 ORTHO05D007446 1.1e-279 966.8 769 63.7
Medtr1g026035 Medicago truncatula HOM05D006129 ORTHO05D007446 3.2e-279 965.3 759 62.3
CAN.G644.34 Capsicum annuum HOM05D006129 ORTHO05D007446 1.6e-278 963.0 704 67.8
Glyma.20G009700 Glycine max HOM05D006129 ORTHO05D007446 1.7e-277 959.5 782 61.9
ECA234G4125 Erigeron canadensis HOM05D006129 ORTHO05D007446 3.3e-276 955.3 796 61.7
TPR.G26422 Trifolium pratense HOM05D006129 ORTHO05D007446 7.3e-276 954.1 738 63.7
Glyma.07G178800 Glycine max HOM05D006129 ORTHO05D007446 1.2e-275 953.4 688 66.3
HanXRQChr10g0303221 Helianthus annuus HOM05D006129 ORTHO05D007446 1.4e-274 949.9 801 61.2
VMungo0464G0688 Vigna mungo HOM05D006129 ORTHO05D007446 6.8e-274 947.6 686 66.2
Phvul.002G308800 Phaseolus vulgaris HOM05D006129 ORTHO05D007446 2.0e-273 946.0 688 66.6
AL3G47590 Arabidopsis lyrata HOM05D006129 ORTHO05D007446 1.3e-272 943.3 830 59.0
CARHR106180 Cardamine hirsuta HOM05D006129 ORTHO05D007446 2.9e-272 942.2 814 59.0
MSTRG.20134 Avicennia marina HOM05D006129 ORTHO05D007446 4.6e-270 934.9 789 62.0
Carub.0003s2972 Capsella rubella HOM05D006129 ORTHO05D007446 3.9e-269 931.8 845 57.4
Sp3g29130 Schrenkiella parvula HOM05D006129 ORTHO05D007446 1.1e-268 930.2 753 61.1
Thhalv10022548m.g Eutrema salsugineum HOM05D006129 ORTHO05D007446 3.3e-268 928.7 780 60.1
Migut.B00306 Erythranthe guttata HOM05D006129 ORTHO05D007446 6.2e-267 924.5 753 61.6
A07p04960 Brassica napus HOM05D006129 ORTHO05D007446 8.1e-267 924.1 766 59.9
THA.LOC104807348 Tarenaya hassleriana HOM05D006129 ORTHO05D007446 1.4e-266 923.3 804 58.8
AT2G15820 Arabidopsis thaliana HOM05D006129 ORTHO05D007446 4.0e-266 921.8 847 56.7
BraA07t28289Z Brassica rapa HOM05D006129 ORTHO05D007446 1.2e-262 910.2 766 59.1
arahy.Tifrunner.gnm1.ann1.769PPM Arachis hypogaea HOM05D006129 ORTHO05D007446 4.6e-262 908.3 707 63.9
BcaC06g36090 Brassica carinata HOM05D006129 ORTHO05D007446 6.0e-262 907.9 761 59.0
C07p07940 Brassica napus HOM05D006129 ORTHO05D007446 6.0e-262 907.9 761 59.0
BolC7t41212H Brassica oleracea HOM05D006129 ORTHO05D007446 6.0e-262 907.9 761 59.0
PGSC0003DMG400026525 Solanum tuberosum HOM05D006129 ORTHO05D007446 1.1e-260 903.7 655 67.6
EL10Ac9g21818 Beta vulgaris HOM05D006129 ORTHO05D007446 6.2e-259 897.9 716 61.0
BcaB03g16332 Brassica carinata HOM05D006129 ORTHO05D007446 3.1e-258 895.6 767 58.9
Sopen11g026560 Solanum pennellii HOM05D006129 ORTHO05D007446 6.9e-258 894.4 662 67.2
AUR62011424 Chenopodium quinoa HOM05D006129 ORTHO05D007446 1.0e-253 880.6 746 58.0
Aa31LG8G13380 Aethionema arabicum HOM05D006129 ORTHO05D007446 2.1e-246 856.3 810 55.6
unitig_744.g24241 Utricularia gibba HOM05D006129 ORTHO05D007446 2.1e-246 856.3 748 57.2
ATR0665G475 Amborella trichopoda HOM05D006129 ORTHO05D007446 3.5e-246 855.5 693 60.5
Ah.01g006750 Amaranthus hybridus HOM05D006129 ORTHO05D007446 1.8e-245 853.2 742 57.1
FAN20G2787 Fragaria x ananassa HOM05D006129 ORTHO05D007446 2.5e-244 849.4 619 68.0
Sabra09G0081600 Salix brachista HOM05D006129 ORTHO05D007446 5.5e-239 831.6 565 72.9
SGA_v2.0_scaffold58G20604 Striga asiatica HOM05D006129 ORTHO05D007446 4.6e-238 828.6 799 54.4
TAR629G1168 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.9e-236 823.2 546 74.0
Os02g0702000 Oryza sativa ssp. japonica HOM05D006129 ORTHO05D007446 1.4e-234 817.0 748 53.9
Zm00001eb251880 Zea mays HOM05D006129 ORTHO05D007446 4.1e-234 815.5 737 55.6
AUR62016636 Chenopodium quinoa HOM05D006129 ORTHO05D007446 9.0e-234 814.3 667 59.8
HPP92_022045 Vanilla planifolia HOM05D006129 ORTHO05D007446 5.7e-228 795.0 803 51.3
Medtr0381s0010 Medicago truncatula HOM05D006129 ORTHO05D007446 1.8e-221 773.5 608 62.2
Eucgr.G01504 Eucalyptus grandis HOM05D006129 ORTHO05D007446 1.8e-218 763.5 808 53.8
Eucgr.L00820 Eucalyptus grandis HOM05D006129 ORTHO05D007446 6.6e-192 675.2 564 63.8
SEGI_31419 Sequoiadendron giganteum HOM05D006129 ORTHO05D007446 2.3e-189 666.8 717 47.6
CDE04G1903 Ceratophyllum demersum HOM05D006129 ORTHO05D007446 1.5e-188 664.1 651 53.0
Psat6g001360 Pisum sativum HOM05D006129 ORTHO05D007446 1.1e-175 621.3 702 48.3
Cc02_g18440 Coffea canephora HOM05D006129 ORTHO05D007446 1.5e-159 567.8 467 62.3
Hund00318 Selenicereus undatus HOM05D006129 ORTHO05D007446 4.0e-157 559.7 414 65.2
TAR371G0992 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.5e-135 488.0 760 42.0
Atru.chr5.2887 Acer truncatum HOM05D006129 ORTHO05D007446 1.8e-133 481.1 538 50.7
QL11p038542 Quercus lobata HOM05D006129 ORTHO05D007446 7.7e-116 422.5 304 70.1
TAR371G0058 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.2e-108 398.7 410 57.1
Atru.chr5.2823 Acer truncatum HOM05D006129 ORTHO05D007446 5.9e-108 396.4 490 48.2
Pp3c25_10050 Physcomitrium patens HOM05D006129 ORTHO05D007446 4.8e-94 350.1 663 31.8
Atru.chr5.2881 Acer truncatum HOM05D006129 ORTHO05D007446 1.5e-90 338.6 311 57.2
Atru.chr5.2826 Acer truncatum HOM05D006129 ORTHO05D007446 1.3e-86 325.5 387 49.4
AagrBONN_evm.TU.Sc2ySwM_344.1734 Anthoceros agrestis HOM05D006129 ORTHO05D007446 6.8e-80 303.1 646 29.7
SMO356G0628 Selaginella moellendorffii HOM05D006129 ORTHO05D007446 5.2e-72 276.9 786 26.8
Mapoly0036s0055 Marchantia polymorpha HOM05D006129 ORTHO05D007446 1.8e-64 251.9 670 26.6
TAR629G1760 Trochodendron aralioides HOM05D006129 ORTHO05D007446 2.7e-60 238.0 229 56.8
AagrBONN_evm.TU.Sc2ySwM_344.5085 Anthoceros agrestis HOM05D006129 ORTHO05D007446 2.8e-57 228.0 699 25.5
Cc02_g18430 Coffea canephora HOM05D006129 ORTHO05D007446 1.1e-45 189.5 171 55.0
arahy.Tifrunner.gnm1.ann1.SUMB0F Arachis hypogaea HOM05D006129 ORTHO05D007446 6.6e-43 180.3 129 65.1
Pp3c16_23700 Physcomitrium patens HOM05D006129 ORTHO05D007446 6.2e-41 173.7 691 23.9
QL11p038477 Quercus lobata HOM05D006129 ORTHO05D007446 7.6e-31 140.2 215 43.3
Atru.chr5.2882 Acer truncatum HOM05D006129 ORTHO05D007446 1.3e-30 139.4 198 44.9
Atru.chr5.2820 Acer truncatum HOM05D006129 ORTHO05D007446 6.9e-16 90.5 180 35.6
CBR_g8924 Chara braunii HOM05D006129 ORTHO05D007446 1.2e-15 89.7 729 18.2
RcHm_v2.0_Chr6g0302241 Rosa chinensis HOM05D006129 ORTHO05D007446 2.6e-15 88.6 61 65.6
RcHm_v2.0_Chr1g0376021 Rosa chinensis HOM05D006129 ORTHO05D007446 3.2e-13 81.6 51 72.5
RcHm_v2.0_Chr2g0152801 Rosa chinensis HOM05D006129 ORTHO05D007446 2.1e-12 79.0 53 73.6
TAR371G0388 Trochodendron aralioides HOM05D001464 ORTHO05D002836 1.1e-10 73.2 55 61.8
AagrBONN_evm.TU.Sc2ySwM_362.2053 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.3e-08 64.3 429 19.6
Pp3c2_12230 Physcomitrium patens HOM05D000001 ORTHO05D000003 1.5e-07 62.8 387 20.7
RcHm_v2.0_Chr3g0448241 Rosa chinensis HOM05D000001 ORTHO05D000003 2.0e-07 62.4 389 21.1
AagrBONN_evm.TU.Sc2ySwM_228.1156 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.4e-07 61.6 363 22.0
CANSAT01G2728 Cannabis sativa HOM05D000001 ORTHO05D000003 3.4e-07 61.6 206 29.1
PGR031G1955 Punica granatum HOM05D000001 ORTHO05D000003 4.5e-07 61.2 266 24.4
AagrBONN_evm.TU.Sc2ySwM_228.880 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.6e-07 60.5 335 22.1
FAN07G0233 Fragaria x ananassa HOM05D008684 ORTHO05D010796 7.6e-07 60.5 421 19.2
AagrBONN_evm.TU.Sc2ySwM_362.2108 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.3e-06 59.7 346 21.4
AagrBONN_evm.TU.Sc2ySwM_368.3189 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.3e-06 59.7 455 21.8
AagrBONN_evm.TU.Sc2ySwM_369.322 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.3e-06 59.7 247 25.9
FAN17G1880 Fragaria x ananassa HOM05D006414 ORTHO05D007780 1.3e-06 59.7 103 30.1
AagrBONN_evm.TU.Sc2ySwM_368.2006__2007 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.2e-06 58.9 335 22.7
Duzib177G0483 Durio zibethinus HOM05D000001 ORTHO05D000003 2.9e-06 58.5 170 28.8
PGR119G0130 Punica granatum HOM05D000001 ORTHO05D000003 3.8e-06 58.2 229 26.2
AagrBONN_evm.TU.Sc2ySwM_368.2311__2312 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.0e-06 57.8 354 22.3
AagrBONN_evm.TU.Sc2ySwM_362.870 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.5e-06 57.4 327 22.9
AagrBONN_evm.TU.Sc2ySwM_368.2160 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.5e-06 57.4 381 23.4
Atru.chr4.307 Acer truncatum HOM05D006414 ORTHO05D007780 8.5e-06 57.0 169 25.4
AagrBONN_evm.TU.Sc2ySwM_228.4318 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.5e-06 57.0 321 24.6

Acer truncatum (8 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (13 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (3 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (0 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (3 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (3 genes)
Quercus lobata (3 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (5 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (6 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings