Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025090 Camellia sinensis var. sinensis HOM05D005519 ORTHO05D006423 1.6e-37 159.5 118 100.0
CSS0002205 Camellia sinensis var. sinensis HOM05D005519 ORTHO05D006423 7.3e-22 107.5 137 73.7
Nitab4.5_0000872g0010 Nicotiana tabacum HOM05D005519 ORTHO05D006423 1.4e-20 103.2 129 62.8
Nitab4.5_0001103g0040 Nicotiana tabacum HOM05D005519 ORTHO05D006423 3.1e-20 102.1 82 76.8
Dinv25895 Davidia involucrata HOM05D005519 ORTHO05D006423 6.9e-20 100.9 141 63.8
SGA_v2.0_scaffold108G30869 Striga asiatica HOM05D005519 ORTHO05D006423 2.6e-19 99.0 78 80.8
Cfa018287 Carpinus fangiana HOM05D005519 ORTHO05D006423 1.7e-18 96.3 78 74.4
PGSC0003DMG400018793 Solanum tuberosum HOM05D005519 ORTHO05D006423 1.7e-18 96.3 81 66.7
Dinv41044 Davidia involucrata HOM05D005519 ORTHO05D006423 2.2e-18 95.9 145 66.2
CAN.G26.8 Capsicum annuum HOM05D005519 ORTHO05D006423 2.9e-18 95.5 84 81.0
Hma1.2p1_0358F.1_g134710 Hydrangea macrophylla HOM05D005519 ORTHO05D006423 2.9e-18 95.5 144 60.4
Actinidia17771 Actinidia chinensis HOM05D005519 ORTHO05D006423 3.8e-18 95.1 79 65.8
Solyc12g056620.2 Solanum lycopersicum HOM05D005519 ORTHO05D006423 6.4e-18 94.4 81 64.2
Glyma.02G079400 Glycine max HOM05D005519 ORTHO05D006423 1.1e-17 93.6 93 60.2
Sopen12g029280 Solanum pennellii HOM05D005519 ORTHO05D006423 1.1e-17 93.6 81 63.0
Cc10_g15180 Coffea canephora HOM05D005519 ORTHO05D006423 1.4e-17 93.2 56 83.9
Glyma.16G163800 Glycine max HOM05D005519 ORTHO05D006423 2.4e-17 92.4 77 66.2
Ca_10667_v3 Cicer arietinum L. HOM05D005519 ORTHO05D006423 4.2e-17 91.7 83 61.4
Lj7A382T71 Lonicera japonica HOM05D005519 ORTHO05D006423 4.2e-17 91.7 56 85.7
Phvul.004G091300 Phaseolus vulgaris HOM05D005519 ORTHO05D006423 5.4e-17 91.3 56 82.1
MSTRG.1105 Avicennia marina HOM05D000084 ORTHO05D006423 7.1e-17 90.9 52 80.8
Haze_17800 Corylus avellana HOM05D005519 ORTHO05D006423 7.1e-17 90.9 56 82.1
Nitab4.5_0002812g0030 Nicotiana tabacum HOM05D005519 ORTHO05D006423 7.1e-17 90.9 52 86.5
PGR042G3808 Punica granatum HOM05D005519 ORTHO05D006423 7.1e-17 90.9 98 60.2
MSTRG.25301 Avicennia marina HOM05D005519 ORTHO05D006423 9.3e-17 90.5 51 86.3
CiPaw.15G012900 Carya illinoinensis HOM05D005519 ORTHO05D006423 9.3e-17 90.5 85 64.7
TWI32G0061 Tripterygium wilfordii HOM05D005519 ORTHO05D006423 9.3e-17 90.5 79 59.5
Oeu051280.1 Olea europaea HOM05D005519 ORTHO05D006423 1.2e-16 90.1 52 84.6
PGSC0003DMG400025068 Solanum tuberosum HOM05D005519 ORTHO05D006423 1.2e-16 90.1 78 80.8
Cpa.g.sc49.79 Carica papaya HOM05D005519 ORTHO05D006423 1.6e-16 89.7 53 79.2
Lsat_1_v5_gn_9_42101 Lactuca sativa HOM05D005519 ORTHO05D006423 1.6e-16 89.7 85 75.3
Psat6g190880 Pisum sativum HOM05D005519 ORTHO05D006423 1.6e-16 89.7 80 65.0
CiPaw.16G008800 Carya illinoinensis HOM05D005519 ORTHO05D006423 2.1e-16 89.4 56 76.8
Manes.02G182800 Manihot esculenta HOM05D005519 ORTHO05D006423 2.1e-16 89.4 56 78.6
Nn5g28816 Nelumbo nucifera HOM05D005519 ORTHO05D006423 2.1e-16 89.4 152 63.8
TAR381G0167 Trochodendron aralioides HOM05D005519 ORTHO05D006423 2.1e-16 89.4 142 58.5
FvH4_2g13070 Fragaria vesca HOM05D005519 ORTHO05D006423 2.7e-16 89.0 52 76.9
FAN24G1125 Fragaria x ananassa HOM05D003947 ORTHO05D004614 2.7e-16 89.0 52 76.9
Glyma.10G222100 Glycine max HOM05D005519 ORTHO05D006423 2.7e-16 89.0 81 60.5
Lsat_1_v5_gn_6_101660 Lactuca sativa HOM05D005519 ORTHO05D006423 3.5e-16 88.6 53 79.2
MD05G1032800 Malus domestica HOM05D005519 ORTHO05D006423 3.5e-16 88.6 50 80.0
Nitab4.5_0000099g0170 Nicotiana tabacum HOM05D005519 ORTHO05D006423 3.5e-16 88.6 52 84.6
FAN15G1092 Fragaria x ananassa HOM05D003947 ORTHO05D004614 4.6e-16 88.2 52 76.9
Lalb_Chr19g0130091 Lupinus albus HOM05D005519 ORTHO05D006423 4.6e-16 88.2 84 59.5
Manes.18G094400 Manihot esculenta HOM05D005519 ORTHO05D006423 4.6e-16 88.2 56 78.6
Rhsim11G0087200 Rhododendron simsii HOM05D005519 ORTHO05D006423 4.6e-16 88.2 97 67.0
Sed0015682 Sechium edule HOM05D005519 ORTHO05D006423 4.6e-16 88.2 54 77.8
RcHm_v2.0_Chr6g0274331 Rosa chinensis HOM05D005519 ORTHO05D006423 6.0e-16 87.8 52 75.0
vmacro01488 Vaccinium macrocarpon HOM05D005519 ORTHO05D006423 6.0e-16 87.8 81 60.5
CAN.G495.8 Capsicum annuum HOM05D005519 ORTHO05D006423 7.9e-16 87.4 51 86.3
ClCG08G008840 Citrullus lanatus HOM05D005519 ORTHO05D006423 7.9e-16 87.4 50 84.0
Glyma.20G169500 Glycine max HOM05D005519 ORTHO05D006423 7.9e-16 87.4 86 59.3
Peaxi162Scf00160g01746 Petunia axillaris HOM05D005519 ORTHO05D006423 7.9e-16 87.4 85 67.1
Potri.002G065000 Populus trichocarpa HOM05D005519 ORTHO05D006423 7.9e-16 87.4 56 75.0
Potri.005G196100 Populus trichocarpa HOM05D005519 ORTHO05D006423 7.9e-16 87.4 152 61.8
TPR.G17016 Trifolium pratense HOM05D005519 ORTHO05D006423 7.9e-16 87.4 55 83.6
TWI34G0476 Tripterygium wilfordii HOM05D005519 ORTHO05D006423 7.9e-16 87.4 53 83.0
VMungo0720G0436 Vigna mungo HOM05D005519 ORTHO05D006423 7.9e-16 87.4 47 87.2
Duzib116G0927 Durio zibethinus HOM05D005519 ORTHO05D006423 1.0e-15 87.0 105 50.5
FAN27G0467 Fragaria x ananassa HOM05D005519 ORTHO05D006423 1.0e-15 87.0 50 78.0
Gohir.D05G247500 Gossypium hirsutum HOM05D005519 ORTHO05D006423 1.0e-15 87.0 124 56.5
Phvul.007G083000 Phaseolus vulgaris HOM05D005519 ORTHO05D006423 1.0e-15 87.0 81 60.5
Solyc04g071930.4 Solanum lycopersicum HOM05D005519 ORTHO05D006423 1.0e-15 87.0 49 85.7
Sopen04g027910 Solanum pennellii HOM05D005519 ORTHO05D006423 1.0e-15 87.0 49 85.7
unitig_26.g9895 Utricularia gibba HOM05D005519 ORTHO05D006423 1.0e-15 87.0 79 72.2
Duzib093G1843 Durio zibethinus HOM05D005519 ORTHO05D006423 1.3e-15 86.7 52 76.9
MD10G1033800 Malus domestica HOM05D005519 ORTHO05D006423 1.3e-15 86.7 52 75.0
Thecc.08G158600 Theobroma cacao HOM05D005519 ORTHO05D006423 1.3e-15 86.7 100 63.0
VMungo0464G1678 Vigna mungo HOM05D005519 ORTHO05D006423 1.3e-15 86.7 52 84.6
CANSAT25G1666 Cannabis sativa HOM05D005519 ORTHO05D006423 1.8e-15 86.3 85 55.3
MELO3C029825.2 Cucumis melo HOM05D005519 ORTHO05D006423 1.8e-15 86.3 50 84.0
Lalb_Chr03g0035541 Lupinus albus HOM05D005519 ORTHO05D006423 1.8e-15 86.3 84 60.7
CsaV3_6G005050 Cucumis sativus L. HOM05D005519 ORTHO05D006423 2.3e-15 85.9 45 91.1
Migut.N03201 Erythranthe guttata HOM05D005519 ORTHO05D006423 2.3e-15 85.9 123 57.7
Gohir.A05G246000 Gossypium hirsutum HOM05D005519 ORTHO05D006423 2.3e-15 85.9 54 74.1
Gorai.009G258300 Gossypium raimondii HOM05D005519 ORTHO05D006423 2.3e-15 85.9 124 56.5
Lj4A703G50 Lonicera japonica HOM05D005519 ORTHO05D006423 2.3e-15 85.9 53 79.2
AUR62026639 Chenopodium quinoa HOM05D003947 ORTHO05D004614 3.0e-15 85.5 50 82.0
DCAR_001160 Daucus carota HOM05D005519 ORTHO05D006423 3.0e-15 85.5 82 62.2
Migut.C00964 Erythranthe guttata HOM05D005519 ORTHO05D006423 3.0e-15 85.5 79 72.2
GSVIVG01034578001 Vitis vinifera HOM05D005519 ORTHO05D006423 3.0e-15 85.5 48 81.2
Ciclev10002625m.g Citrus clementina HOM05D005519 ORTHO05D006423 3.9e-15 85.1 47 83.0
Sabra05G0149500 Salix brachista HOM05D005519 ORTHO05D006423 3.9e-15 85.1 47 83.0
arahy.Tifrunner.gnm1.ann1.8F5AL7 Arachis hypogaea HOM05D005519 ORTHO05D006423 5.1e-15 84.7 78 74.4
arahy.Tifrunner.gnm1.ann1.SKG6R6 Arachis hypogaea HOM05D005519 ORTHO05D006423 5.1e-15 84.7 78 74.4
Sabra02G0051900 Salix brachista HOM05D005519 ORTHO05D006423 5.1e-15 84.7 56 73.2
Sed0018725 Sechium edule HOM05D005519 ORTHO05D006423 6.7e-15 84.3 91 54.9
ECA246G0665 Erigeron canadensis HOM05D003947 ORTHO05D006423 8.7e-15 84.0 83 59.0
Aa31LG6G8220 Aethionema arabicum HOM05D005519 ORTHO05D006423 1.1e-14 83.6 54 79.6
Gohir.D02G068600 Gossypium hirsutum HOM05D005519 ORTHO05D006423 1.1e-14 83.6 84 60.7
Medtr1g098280 Medicago truncatula HOM05D005519 ORTHO05D006423 1.1e-14 83.6 78 67.9
Peaxi162Scf00360g00028 Petunia axillaris HOM05D005519 ORTHO05D006423 1.1e-14 83.6 121 58.7
Prupe.8G039900 Prunus persica HOM05D005519 ORTHO05D006423 1.1e-14 83.6 47 78.7
Hund30143 Selenicereus undatus HOM05D005519 ORTHO05D006423 1.1e-14 83.6 50 80.0
Sc26g0002910 Simmondsia chinensis HOM05D005519 ORTHO05D006423 1.1e-14 83.6 47 83.0
QL02p038173 Quercus lobata HOM05D005519 ORTHO05D006423 1.5e-14 83.2 55 76.4
QL02p037831 Quercus lobata HOM05D005519 ORTHO05D006423 2.5e-14 82.4 55 76.4
AL1G48440 Arabidopsis lyrata HOM05D005519 ORTHO05D006423 3.3e-14 82.0 79 72.2
Gorai.005G077500 Gossypium raimondii HOM05D005519 ORTHO05D006423 3.3e-14 82.0 84 65.5
MBI04_g08940_MAGBIO Magnolia biondii HOM05D005519 ORTHO05D006423 3.3e-14 82.0 44 86.4
THA.LOC104825113 Tarenaya hassleriana HOM05D005519 ORTHO05D006423 3.3e-14 82.0 48 79.2
AT1G34000 Arabidopsis thaliana HOM05D005519 ORTHO05D006423 4.3e-14 81.6 52 82.7
Ah.05g168160 Amaranthus hybridus HOM05D005519 ORTHO05D006423 7.4e-14 80.9 57 71.9
A05p24090 Brassica napus HOM05D011378 ORTHO05D006423 7.4e-14 80.9 52 80.8
BraA05t21288Z Brassica rapa HOM05D003947 ORTHO05D006423 7.4e-14 80.9 52 80.8
Thhalv10008704m.g Eutrema salsugineum HOM05D005519 ORTHO05D006423 7.4e-14 80.9 53 77.4
Lj2g0026694 Lotus japonicus HOM05D005519 ORTHO05D006423 7.4e-14 80.9 53 75.5
BcaB07g33022 Brassica carinata HOM05D005519 ORTHO05D006423 9.6e-14 80.5 52 80.8
Nn1g06007 Nelumbo nucifera HOM05D005519 ORTHO05D006423 9.6e-14 80.5 149 58.4
A08p08390 Brassica napus HOM05D005519 ORTHO05D006423 1.3e-13 80.1 51 80.4
BraA08t32855Z Brassica rapa HOM05D005519 ORTHO05D006423 1.3e-13 80.1 51 80.4
THA.LOC104806763 Tarenaya hassleriana HOM05D005519 ORTHO05D006423 1.6e-13 79.7 46 80.4
Atru.chr13.2018 Acer truncatum HOM05D005519 ORTHO05D006423 2.8e-13 79.0 86 66.3
Carub.0001s3208 Capsella rubella HOM05D005519 ORTHO05D006423 3.7e-13 78.6 78 74.4
Lj5g0019555 Lotus japonicus HOM05D005519 ORTHO05D006423 4.8e-13 78.2 76 73.7
BcaC08g43825 Brassica carinata HOM05D005519 ORTHO05D006423 6.2e-13 77.8 74 70.3
BolC6t36346H Brassica oleracea HOM05D005519 ORTHO05D006423 6.2e-13 77.8 74 70.3
HanXRQChr11g0320251 Helianthus annuus HOM05D005519 ORTHO05D006423 6.2e-13 77.8 40 90.0
Sp1g29260 Schrenkiella parvula HOM05D005519 ORTHO05D006423 6.2e-13 77.8 78 70.5
ATR0580G316 Amborella trichopoda HOM05D005519 ORTHO05D006423 8.1e-13 77.4 48 68.8
BcaB04g17909 Brassica carinata HOM05D005519 ORTHO05D006423 1.1e-12 77.0 46 80.4
A09p32470 Brassica napus HOM05D005519 ORTHO05D006423 1.1e-12 77.0 54 74.1
C06p12090 Brassica napus HOM05D005519 ORTHO05D006423 1.1e-12 77.0 54 74.1
BraA09t38789Z Brassica rapa HOM05D005519 ORTHO05D006423 1.4e-12 76.6 74 75.7
BolC8t47881H Brassica oleracea HOM05D005519 ORTHO05D006423 1.8e-12 76.3 52 75.0
Zm00001eb357520 Zea mays HOM05D005519 ORTHO05D006423 1.8e-12 76.3 43 76.7
CARHR033380 Cardamine hirsuta HOM05D005519 ORTHO05D006423 2.4e-12 75.9 51 76.5
HPP92_000679 Vanilla planifolia HOM05D005519 ORTHO05D006423 2.4e-12 75.9 94 55.3
Zm00001eb160790 Zea mays HOM05D005519 ORTHO05D006423 2.4e-12 75.9 54 68.5
CDE04G2354 Ceratophyllum demersum HOM05D005519 ORTHO05D006423 5.3e-12 74.7 45 73.3
PSO541G5828 Papaver somniferum HOM05D005519 ORTHO05D006423 9.0e-12 73.9 46 71.7
PSO675G0400 Papaver somniferum HOM05D005519 ORTHO05D006423 9.0e-12 73.9 46 71.7
Eucgr.L00901 Eucalyptus grandis HOM05D005519 ORTHO05D006423 1.4e-09 66.6 42 76.2
AUR62034898 Chenopodium quinoa HOM05D005519 ORTHO05D006423 2.4e-09 65.9 37 81.1
Os01g0589800 Oryza sativa ssp. japonica HOM05D005519 ORTHO05D006423 5.5e-09 64.7 32 87.5
COL.COLO4_03361 Corchorus olitorius HOM05D005519 ORTHO05D006423 1.5e-06 56.6 31 71.0
SMO139G0065 Selaginella moellendorffii HOM05D005519 ORTHO05D006423 5.6e-06 54.7 55 50.9
AagrBONN_evm.TU.Sc2ySwM_117.629 Anthoceros agrestis HOM05D005519 ORTHO05D006423 9.6e-06 53.9 46 58.7

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (0 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (4 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (2 genes)
Lotus japonicus (2 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings