Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024427 Camellia sinensis var. sinensis HOM05D005946 ORTHO05D007340 4.9e-38 160.6 79 100.0
Rhsim12G0028200 Rhododendron simsii HOM05D005946 ORTHO05D007340 1.8e-32 142.1 71 95.8
Dinv14819 Davidia involucrata HOM05D005946 ORTHO05D007340 5.2e-32 140.6 71 93.0
Duzib251G0400 Durio zibethinus HOM05D005946 ORTHO05D007340 8.9e-32 139.8 71 91.5
Gohir.A03G127300 Gossypium hirsutum HOM05D005946 ORTHO05D007340 8.9e-32 139.8 71 91.5
Gorai.005G169000 Gossypium raimondii HOM05D005946 ORTHO05D007340 8.9e-32 139.8 71 91.5
Thecc.02G276900 Theobroma cacao HOM05D005946 ORTHO05D007340 8.9e-32 139.8 71 91.5
Gohir.D02G150700 Gossypium hirsutum HOM05D005946 ORTHO05D007340 1.2e-31 139.4 71 91.5
Duzib248G1204 Durio zibethinus HOM05D005946 ORTHO05D007340 2.0e-31 138.7 71 90.1
CiPaw.06G100600 Carya illinoinensis HOM05D005946 ORTHO05D007340 7.6e-31 136.7 71 88.7
Rhsim07G0080600 Rhododendron simsii HOM05D005946 ORTHO05D007340 7.6e-31 136.7 71 91.5
TWI36G1309 Tripterygium wilfordii HOM05D005946 ORTHO05D007340 7.6e-31 136.7 71 88.7
Gorai.002G192200 Gossypium raimondii HOM05D005946 ORTHO05D007340 1.3e-30 136.0 71 88.7
Lsat_1_v5_gn_6_8840 Lactuca sativa HOM05D005946 ORTHO05D007340 1.3e-30 136.0 71 90.1
Phvul.001G260400 Phaseolus vulgaris HOM05D005946 ORTHO05D007340 1.7e-30 135.6 71 87.3
TWI36G1530 Tripterygium wilfordii HOM05D005946 ORTHO05D007340 1.7e-30 135.6 71 87.3
vmacro01071 Vaccinium macrocarpon HOM05D005946 ORTHO05D007340 1.7e-30 135.6 71 91.5
CiPaw.05G112200 Carya illinoinensis HOM05D005946 ORTHO05D007340 2.2e-30 135.2 71 88.7
Cc00_g13530 Coffea canephora HOM05D005946 ORTHO05D007340 2.2e-30 135.2 71 88.7
Migut.N01429 Erythranthe guttata HOM05D005946 ORTHO05D007340 2.2e-30 135.2 71 88.7
Manes.12G013300 Manihot esculenta HOM05D005946 ORTHO05D007340 2.2e-30 135.2 71 87.3
Manes.13G017850 Manihot esculenta HOM05D005946 ORTHO05D007340 2.2e-30 135.2 71 87.3
PGR004G0564 Punica granatum HOM05D005946 ORTHO05D007340 2.2e-30 135.2 71 85.9
Solyc06g068780.3 Solanum lycopersicum HOM05D005946 ORTHO05D007340 2.2e-30 135.2 71 88.7
Sopen06g026060 Solanum pennellii HOM05D005946 ORTHO05D007340 2.2e-30 135.2 71 88.7
PGSC0003DMG400025576 Solanum tuberosum HOM05D005946 ORTHO05D007340 2.2e-30 135.2 71 88.7
TWI14G1045 Tripterygium wilfordii HOM05D005946 ORTHO05D007340 2.2e-30 135.2 71 87.3
EL10Ac6g13474 Beta vulgaris HOM05D005946 ORTHO05D007340 2.9e-30 134.8 71 87.3
Nitab4.5_0001841g0040 Nicotiana tabacum HOM05D005946 ORTHO05D007340 2.9e-30 134.8 70 90.0
Prupe.5G124600 Prunus persica HOM05D005946 ORTHO05D007340 2.9e-30 134.8 71 87.3
Sed0027475 Sechium edule HOM05D005946 ORTHO05D007340 2.9e-30 134.8 71 85.9
CANSAT21G2474 Cannabis sativa HOM05D005946 ORTHO05D007340 3.8e-30 134.4 71 88.7
Ciclev10033263m.g Citrus clementina HOM05D005946 ORTHO05D007340 3.8e-30 134.4 71 85.9
ECA246G0405 Erigeron canadensis HOM05D005946 ORTHO05D007340 3.8e-30 134.4 71 88.7
HanXRQChr17g0534681 Helianthus annuus HOM05D005946 ORTHO05D007340 3.8e-30 134.4 71 88.7
TPR.G21803 Trifolium pratense HOM05D005946 ORTHO05D007340 3.8e-30 134.4 71 85.9
CARHR192660 Cardamine hirsuta HOM05D005946 ORTHO05D007340 4.9e-30 134.0 71 88.7
Thhalv10015210m.g Eutrema salsugineum HOM05D005946 ORTHO05D007340 4.9e-30 134.0 71 88.7
Glyma.11G249100 Glycine max HOM05D005946 ORTHO05D007340 4.9e-30 134.0 71 85.9
HanXRQChr07g0190741 Helianthus annuus HOM05D005946 ORTHO05D007340 4.9e-30 134.0 71 88.7
MD14G1133000 Malus domestica HOM05D005946 ORTHO05D007340 4.9e-30 134.0 71 87.3
Sp6g24240 Schrenkiella parvula HOM05D005946 ORTHO05D007340 4.9e-30 134.0 71 88.7
THA.LOC109116592 Tarenaya hassleriana HOM05D005946 ORTHO05D007340 4.9e-30 134.0 71 88.7
arahy.Tifrunner.gnm1.ann1.55451G Arachis hypogaea HOM05D005946 ORTHO05D007340 6.4e-30 133.7 70 87.1
SalBow5G0243 Salvia bowleyana HOM05D005946 ORTHO05D007340 6.4e-30 133.7 71 87.3
SalBow5G1014 Salvia bowleyana HOM05D005946 ORTHO05D007340 6.4e-30 133.7 71 87.3
Nitab4.5_0008858g0060 Nicotiana tabacum HOM05D005946 ORTHO05D007340 8.4e-30 133.3 70 88.6
Potri.008G176801 Populus trichocarpa HOM05D005946 ORTHO05D007340 8.4e-30 133.3 71 85.9
Potri.010G058300 Populus trichocarpa HOM05D005946 ORTHO05D007340 8.4e-30 133.3 71 85.9
A03p09890 Brassica napus HOM05D005946 ORTHO05D007340 1.1e-29 132.9 71 87.3
CAN.G1089.18 Capsicum annuum HOM05D005946 ORTHO05D007340 1.1e-29 132.9 70 88.6
Medtr3g085600 Medicago truncatula HOM05D005946 ORTHO05D007340 1.1e-29 132.9 71 84.5
AL6G31720 Arabidopsis lyrata HOM05D005946 ORTHO05D007340 1.4e-29 132.5 71 87.3
AT5G20165 Arabidopsis thaliana HOM05D005946 ORTHO05D007340 1.4e-29 132.5 71 87.3
MSTRG.28215 Avicennia marina HOM05D005946 ORTHO05D007340 1.4e-29 132.5 76 81.6
A10p19740 Brassica napus HOM05D005946 ORTHO05D007340 1.4e-29 132.5 72 87.5
C09p56030 Brassica napus HOM05D005946 ORTHO05D007340 1.4e-29 132.5 72 87.5
BolC3t13619H Brassica oleracea HOM05D005946 ORTHO05D007340 1.4e-29 132.5 70 88.6
BolC9t58470H Brassica oleracea HOM05D005946 ORTHO05D007340 1.4e-29 132.5 72 87.5
BraA03t10302Z Brassica rapa HOM05D005946 ORTHO05D007340 1.4e-29 132.5 70 88.6
BraA10t44050Z Brassica rapa HOM05D005946 ORTHO05D007340 1.4e-29 132.5 72 87.5
Carub.0006s1856 Capsella rubella HOM05D005946 ORTHO05D007340 1.4e-29 132.5 71 87.3
Actinidia27305 Actinidia chinensis HOM05D005946 ORTHO05D007340 2.4e-29 131.7 71 87.3
Eucgr.B03471 Eucalyptus grandis HOM05D005946 ORTHO05D007340 3.2e-29 131.3 71 84.5
SalBow3G2240 Salvia bowleyana HOM05D005946 ORTHO05D007340 4.1e-29 131.0 71 87.3
Solyc03g118140.3 Solanum lycopersicum HOM05D005946 ORTHO05D007340 4.1e-29 131.0 71 85.9
Sopen03g037060 Solanum pennellii HOM05D005946 ORTHO05D007340 4.1e-29 131.0 71 85.9
Aa31LG10G8610 Aethionema arabicum HOM05D005946 ORTHO05D007340 5.4e-29 130.6 71 85.9
CAN.G843.5 Capsicum annuum HOM05D005946 ORTHO05D007340 5.4e-29 130.6 70 87.1
FvH4_5g11580 Fragaria vesca HOM05D005946 ORTHO05D007340 5.4e-29 130.6 71 87.3
Lsat_1_v5_gn_3_12801 Lactuca sativa HOM05D005946 ORTHO05D007340 5.4e-29 130.6 71 85.9
Lj4g0023384 Lotus japonicus HOM05D005946 ORTHO05D007340 5.4e-29 130.6 71 85.9
Nn3g18946 Nelumbo nucifera HOM05D005946 ORTHO05D007340 5.4e-29 130.6 69 87.0
Migut.B01726 Erythranthe guttata HOM05D005946 ORTHO05D007340 7.1e-29 130.2 71 84.5
MD06G1111800 Malus domestica HOM05D005946 ORTHO05D007340 7.1e-29 130.2 71 84.5
PGR102G2803 Punica granatum HOM05D005946 ORTHO05D007340 7.1e-29 130.2 71 83.1
TAR374G1140 Trochodendron aralioides HOM05D005946 ORTHO05D007340 7.1e-29 130.2 71 85.9
unitig_747.g21988 Utricularia gibba HOM05D005946 ORTHO05D007340 7.1e-29 130.2 71 85.9
CDE10G0705 Ceratophyllum demersum HOM05D005946 ORTHO05D007340 1.2e-28 129.4 71 83.1
MBI07_g24770_MAGBIO Magnolia biondii HOM05D005946 ORTHO05D007340 1.2e-28 129.4 72 81.9
PSO063G0123 Papaver somniferum HOM05D005946 ORTHO05D007340 3.5e-28 127.9 71 83.1
PSO170G6765 Papaver somniferum HOM05D005946 ORTHO05D007340 3.5e-28 127.9 71 83.1
Os05g0251500 Oryza sativa ssp. japonica HOM05D005946 ORTHO05D007340 4.6e-28 127.5 71 81.7
SEGI_28367 Sequoiadendron giganteum HOM05D005946 ORTHO05D007340 3.0e-27 124.8 71 80.3
Lalb_Chr05g0223941 Lupinus albus HOM05D005946 ORTHO05D007340 6.6e-27 123.6 71 78.9
Lalb_Chr09g0332191 Lupinus albus HOM05D005946 ORTHO05D007340 1.1e-26 122.9 71 80.3
THA.LOC104799646 Tarenaya hassleriana HOM05D005946 ORTHO05D007340 1.5e-26 122.5 90 70.0
vmacro14062 Vaccinium macrocarpon HOM05D005946 ORTHO05D007340 1.9e-26 122.1 62 91.9
CDE10G0420 Ceratophyllum demersum HOM05D005946 ORTHO05D007340 1.2e-25 119.4 63 85.7
Psat7g023880 Pisum sativum HOM05D005946 ORTHO05D007340 1.2e-25 119.4 71 78.9
Mapoly0008s0042 Marchantia polymorpha HOM05D005946 ORTHO05D007340 1.6e-25 119.0 76 72.4
Os02g0299600 Oryza sativa ssp. japonica HOM05D005946 ORTHO05D007340 1.6e-25 119.0 71 74.6
Zm00001eb237180 Zea mays HOM05D005946 ORTHO05D007340 2.1e-25 118.6 73 74.0
arahy.Tifrunner.gnm1.ann1.XCNA8V Arachis hypogaea HOM05D005946 ORTHO05D007340 2.8e-25 118.2 99 61.6
unitig_0.g1509 Utricularia gibba HOM05D005946 ORTHO05D007340 6.2e-25 117.1 69 81.2
Pp3s128_20 Physcomitrium patens HOM05D005946 ORTHO05D007340 5.2e-24 114.0 71 74.6
AagrBONN_evm.TU.Sc2ySwM_228.3656 Anthoceros agrestis HOM05D005946 ORTHO05D007340 6.9e-24 113.6 71 71.8
RcHm_v2.0_Chr4g0430651 Rosa chinensis HOM05D005946 ORTHO05D007340 3.4e-23 111.3 69 72.5
FvH4_4g23990 Fragaria vesca HOM05D005946 ORTHO05D007340 4.9e-22 107.5 69 71.0
Cre07.g325735 Chlamydomonas reinhardtii HOM05D005946 ORTHO05D007340 1.6e-20 102.4 71 64.8
Sabra08G0134600 Salix brachista HOM05D005946 ORTHO05D007340 1.5e-18 95.9 145 42.1
C03p11470 Brassica napus HOM05D005946 ORTHO05D007340 1.9e-18 95.5 56 80.4
Glyma.18G008200 Glycine max HOM05D005946 ORTHO05D007340 5.6e-18 94.0 49 85.7
Actinidia22739 Actinidia chinensis HOM05D005946 ORTHO05D007340 7.3e-18 93.6 63 74.6
Nn1g00299 Nelumbo nucifera HOM05D005946 ORTHO05D007340 9.6e-18 93.2 44 90.9
Peaxi162Scf00314g00635 Petunia axillaris HOM05D005946 ORTHO05D007340 3.6e-17 91.3 50 84.0
SGA_v2.0_scaffold11G05656 Striga asiatica HOM05D000612 ORTHO05D000461 3.6e-17 91.3 49 85.7
CsaV3_6G032330 Cucumis sativus L. HOM05D003413 ORTHO05D004197 4.8e-17 90.9 54 75.9
MELO3C030289.2 Cucumis melo HOM05D005946 ORTHO05D007340 4.0e-16 87.8 48 81.2
TPR.G37229 Trifolium pratense HOM05D005946 ORTHO05D007340 9.0e-16 86.7 51 76.5
Dinv16088 Davidia involucrata HOM05D005946 ORTHO05D007340 1.7e-14 82.4 48 81.2
RcHm_v2.0_Chr5g0020411 Rosa chinensis HOM05D005946 ORTHO05D007340 4.9e-14 80.9 69 55.1
HPP92_000512 Vanilla planifolia HOM05D005946 ORTHO05D007340 4.9e-14 80.9 38 89.5
Sed0005468 Sechium edule HOM05D005946 ORTHO05D007340 1.1e-13 79.7 69 59.4
MCO08G327 Micromonas commoda HOM05D005946 ORTHO05D007340 1.4e-13 79.3 62 59.7
ATR0955G005 Amborella trichopoda HOM05D005946 ORTHO05D007340 1.9e-13 79.0 47 76.6
FvH4_3g12470 Fragaria vesca HOM05D005946 ORTHO05D045642 1.9e-13 79.0 74 52.7
FAN07G2898 Fragaria x ananassa HOM05D005946 ORTHO05D007340 1.2e-12 76.3 62 59.7
PRCOL_00003875 Prasinoderma coloniale HOM05D005946 ORTHO05D007340 1.6e-12 75.9 71 50.7
FAN17G0158 Fragaria x ananassa HOM05D005946 ORTHO05D007340 1.3e-11 72.8 53 64.2
Nitab4.5_0005774g0040 Nicotiana tabacum HOM05D005946 ORTHO05D007340 2.3e-11 72.0 34 94.1
FAN12G4044 Fragaria x ananassa HOM05D005946 ORTHO05D007340 3.9e-11 71.2 48 68.8
Psat5g094720 Pisum sativum HOM05D005946 ORTHO05D007340 1.1e-10 69.7 47 68.1
RcHm_v2.0_Chr7g0186171 Rosa chinensis HOM05D005946 ORTHO05D007340 1.9e-10 68.9 37 89.2
FAN04G2943 Fragaria x ananassa HOM05D005946 ORTHO05D007340 2.5e-10 68.6 39 87.2
FAN08G3074 Fragaria x ananassa HOM05D005946 ORTHO05D007340 2.5e-10 68.6 39 87.2
FAN18G3129 Fragaria x ananassa HOM05D005946 ORTHO05D007340 2.5e-10 68.6 39 87.2
SHI17703 Sapria himalayana HOM05D005946 ORTHO05D007340 3.3e-10 68.2 38 78.9
arahy.Tifrunner.gnm1.ann1.K0QS2G Arachis hypogaea HOM05D005946 ORTHO05D007340 4.3e-10 67.8 43 72.1
ClCG08G010140 Citrullus lanatus HOM05D005946 ORTHO05D007340 2.8e-09 65.1 37 75.7
Peaxi162Scf00207g00238 Petunia axillaris HOM05D005946 ORTHO05D007340 4.8e-09 64.3 37 78.4
Sabra10G0047000 Salix brachista HOM05D005946 ORTHO05D007340 8.1e-09 63.5 43 67.4

Acer truncatum (0 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (0 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (3 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (2 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (3 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (0 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (3 genes)
Salix brachista (2 genes)
Salvia bowleyana (3 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (1 genes)

Program Settings