Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023679 Camellia sinensis var. sinensis HOM05D004815 ORTHO05D005742 5.1e-176 620.9 302 100.0
CSS0047010 Camellia sinensis var. sinensis HOM05D004815 ORTHO05D005742 3.0e-160 568.5 302 94.0
Actinidia31455 Actinidia chinensis HOM05D004815 ORTHO05D005742 8.2e-102 374.4 292 66.8
Rhsim07G0022400 Rhododendron simsii HOM05D004815 ORTHO05D005742 1.1e-101 374.0 286 67.5
Actinidia09581 Actinidia chinensis HOM05D004815 ORTHO05D005742 5.5e-98 361.7 283 65.7
vmacro13348 Vaccinium macrocarpon HOM05D004815 ORTHO05D005742 4.1e-93 345.5 286 64.7
Potri.002G152300 Populus trichocarpa HOM05D004815 ORTHO05D005742 2.0e-84 316.6 287 58.2
TAR629G0568 Trochodendron aralioides HOM05D004815 ORTHO05D005742 3.8e-83 312.4 287 58.2
CiPaw.01G257600 Carya illinoinensis HOM05D004815 ORTHO05D005742 3.3e-82 309.3 287 56.4
FAN01G1324 Fragaria x ananassa HOM05D004815 ORTHO05D005742 9.5e-82 307.8 287 56.4
FvH4_7g12840 Fragaria vesca HOM05D004815 ORTHO05D005742 2.1e-81 306.6 287 56.1
FAN06G3277 Fragaria x ananassa HOM05D004815 ORTHO05D005742 2.1e-81 306.6 287 56.1
FAN06G3416 Fragaria x ananassa HOM05D004815 ORTHO05D005742 2.1e-81 306.6 287 56.1
RcHm_v2.0_Chr1g0351921 Rosa chinensis HOM05D004815 ORTHO05D005742 3.6e-81 305.8 287 56.4
Manes.05G040900 Manihot esculenta HOM05D004815 ORTHO05D005742 8.0e-81 304.7 288 55.9
Haze_16704 Corylus avellana HOM05D004815 ORTHO05D005742 1.8e-80 303.5 287 57.5
GSVIVG01027589001 Vitis vinifera HOM05D004815 ORTHO05D005742 2.3e-80 303.1 286 57.3
Duzib133G0793 Durio zibethinus HOM05D004815 ORTHO05D005742 3.0e-80 302.8 289 55.7
QL08p050919 Quercus lobata HOM05D004815 ORTHO05D005742 4.0e-80 302.4 287 56.8
FAN10G2694 Fragaria x ananassa HOM05D004815 ORTHO05D005742 6.8e-80 301.6 287 55.7
MD02G1195800 Malus domestica HOM05D004815 ORTHO05D005742 2.6e-79 299.7 287 55.1
Cfa001810 Carpinus fangiana HOM05D004815 ORTHO05D005742 1.3e-78 297.4 289 56.4
Potri.014G078300 Populus trichocarpa HOM05D004815 ORTHO05D005742 2.2e-78 296.6 287 56.1
Thecc.01G370200 Theobroma cacao HOM05D004815 ORTHO05D005742 2.9e-78 296.2 287 55.4
Duzib138G1778 Durio zibethinus HOM05D004815 ORTHO05D005742 6.4e-78 295.0 303 53.1
Oeu059223.1 Olea europaea HOM05D003859 ORTHO05D004927 9.2e-77 291.2 288 55.9
TAR636G2513 Trochodendron aralioides HOM05D004815 ORTHO05D005742 1.2e-76 290.8 287 55.4
Cc02_g37080 Coffea canephora HOM05D004815 ORTHO05D005742 1.6e-76 290.4 288 57.6
Gohir.A07G144600 Gossypium hirsutum HOM05D004815 ORTHO05D005742 5.9e-76 288.5 288 54.2
Gohir.D07G150500 Gossypium hirsutum HOM05D004815 ORTHO05D005742 7.8e-76 288.1 288 54.2
Lj7C524T7 Lonicera japonica HOM05D004815 ORTHO05D005742 7.8e-76 288.1 287 56.4
Sabra14G0053800 Salix brachista HOM05D004815 ORTHO05D005742 7.8e-76 288.1 287 55.4
Manes.01G263200 Manihot esculenta HOM05D004815 ORTHO05D005742 1.0e-75 287.7 287 54.7
Gorai.001G172600 Gossypium raimondii HOM05D004815 ORTHO05D005742 1.7e-75 287.0 288 53.8
Cpa.g.sc18.178 Carica papaya HOM05D004815 ORTHO05D005742 1.9e-74 283.5 283 55.1
Cc09_g02920 Coffea canephora HOM05D004815 ORTHO05D005742 1.9e-74 283.5 287 55.4
Ciclev10020702m.g Citrus clementina HOM05D004815 ORTHO05D005742 2.5e-74 283.1 287 54.7
TWI23G0970 Tripterygium wilfordii HOM05D004815 ORTHO05D005742 2.5e-74 283.1 287 54.0
Atru.chr5.381_Atru.chr5.382 Acer truncatum HOM05D004815 ORTHO05D005742 5.6e-74 282.0 287 55.4
MELO3C022521.2 Cucumis melo HOM05D004815 ORTHO05D005742 7.3e-74 281.6 287 53.0
CsaV3_6G005940 Cucumis sativus L. HOM05D004815 ORTHO05D005742 6.8e-72 275.0 287 52.3
Nn1g01309 Nelumbo nucifera HOM05D004815 ORTHO05D005742 6.8e-72 275.0 286 52.8
Peaxi162Scf00021g00232 Petunia axillaris HOM05D004815 ORTHO05D005742 5.8e-71 271.9 287 53.0
ClCG06G000170 Citrullus lanatus HOM05D004815 ORTHO05D005742 1.3e-70 270.8 282 52.1
CANSAT56G0719 Cannabis sativa HOM05D004815 ORTHO05D005742 1.7e-70 270.4 288 53.1
Sed0027777 Sechium edule HOM05D004815 ORTHO05D005742 2.9e-70 269.6 285 50.5
MBI04_g28567_MAGBIO Magnolia biondii HOM05D004815 ORTHO05D005742 4.9e-70 268.9 288 52.1
Nitab4.5_0013229g0020 Nicotiana tabacum HOM05D004815 ORTHO05D005742 4.9e-70 268.9 287 52.3
PGSC0003DMG400000005 Solanum tuberosum HOM05D004815 ORTHO05D005742 6.4e-70 268.5 288 51.4
TWI59G0538 Tripterygium wilfordii HOM05D004815 ORTHO05D005742 8.3e-70 268.1 287 50.9
Prupe.2G152800 Prunus persica HOM05D004815 ORTHO05D005742 1.4e-69 267.3 263 55.9
Sc02g0002260 Simmondsia chinensis HOM05D004815 ORTHO05D005742 2.4e-69 266.5 287 51.9
DCAR_006900 Daucus carota HOM05D004815 ORTHO05D005742 7.0e-69 265.0 287 52.3
Lalb_Chr17g0340041 Lupinus albus HOM05D004815 ORTHO05D005742 7.0e-69 265.0 287 51.9
Lj3g0020425 Lotus japonicus HOM05D004815 ORTHO05D005742 9.2e-69 264.6 287 51.2
Solyc01g091900.3 Solanum lycopersicum HOM05D004815 ORTHO05D005742 9.2e-69 264.6 288 51.7
AUR62033376 Chenopodium quinoa HOM05D004815 ORTHO05D005742 2.0e-68 263.5 288 51.7
CAN.G170.62 Capsicum annuum HOM05D004815 ORTHO05D005742 7.8e-68 261.5 288 50.7
Medtr8g033040 Medicago truncatula HOM05D004815 ORTHO05D005742 3.9e-67 259.2 287 51.6
MD02G1195700 Malus domestica HOM05D004815 ORTHO05D005742 5.0e-67 258.8 288 50.7
Ca_23774_v3 Cicer arietinum L. HOM05D004815 ORTHO05D005742 8.6e-67 258.1 287 50.9
PGR031G2979 Punica granatum HOM05D004815 ORTHO05D005742 8.6e-67 258.1 292 47.3
Sopen01g037670 Solanum pennellii HOM05D004815 ORTHO05D005742 8.6e-67 258.1 282 51.8
TPR.G17590 Trifolium pratense HOM05D004815 ORTHO05D005742 8.6e-67 258.1 289 50.2
TPR.G17395 Trifolium pratense HOM05D004815 ORTHO05D005742 1.5e-66 257.3 291 51.2
THA.LOC104817269 Tarenaya hassleriana HOM05D004815 ORTHO05D005742 2.5e-66 256.5 291 49.1
HanXRQChr04g0121731 Helianthus annuus HOM05D004815 ORTHO05D005742 9.5e-66 254.6 314 49.4
Aqoxy7G00483 Aquilegia oxysepala HOM05D004815 ORTHO05D005742 1.2e-65 254.2 287 52.3
Glyma.07G080200 Glycine max HOM05D004815 ORTHO05D005742 2.1e-65 253.4 287 51.6
Glyma.03G018700 Glycine max HOM05D004815 ORTHO05D005742 8.1e-65 251.5 287 50.9
SalBow7G0216 Salvia bowleyana HOM05D004815 ORTHO05D005742 8.1e-65 251.5 289 48.8
ECA236G5005 Erigeron canadensis HOM05D004815 ORTHO05D005742 2.3e-64 250.0 313 47.6
EL10Ac1g00976 Beta vulgaris HOM05D004815 ORTHO05D005742 5.2e-64 248.8 289 47.1
Psat4g200880 Pisum sativum HOM05D004815 ORTHO05D005742 1.2e-63 247.7 290 49.7
Sabra02G0120600 Salix brachista HOM05D004815 ORTHO05D005742 2.6e-63 246.5 271 50.6
Lalb_Chr10g0097591 Lupinus albus HOM05D004815 ORTHO05D005742 3.4e-63 246.1 288 49.7
Phvul.010G089200 Phaseolus vulgaris HOM05D004815 ORTHO05D005742 3.4e-63 246.1 291 50.9
Aa31LG1G27160 Aethionema arabicum HOM05D004815 ORTHO05D005742 7.5e-63 245.0 291 48.1
SGA_v2.0_scaffold153G37057 Striga asiatica HOM05D004815 ORTHO05D005742 7.5e-63 245.0 285 49.8
Migut.B01673 Erythranthe guttata HOM05D004815 ORTHO05D005742 9.8e-63 244.6 278 49.6
arahy.Tifrunner.gnm1.ann1.GZV6IQ Arachis hypogaea HOM05D004815 ORTHO05D005742 2.9e-62 243.0 289 48.4
VMungo0331G0142 Vigna mungo HOM05D004815 ORTHO05D005742 3.7e-62 242.7 288 50.3
AT2G45690 Arabidopsis thaliana HOM05D004815 ORTHO05D005742 4.9e-62 242.3 291 49.1
Sp4g27730 Schrenkiella parvula HOM05D004815 ORTHO05D005742 4.9e-62 242.3 294 48.3
Lsat_1_v5_gn_7_8041 Lactuca sativa HOM05D004815 ORTHO05D005742 6.4e-62 241.9 291 47.8
AL4G44860 Arabidopsis lyrata HOM05D004815 ORTHO05D005742 1.4e-61 240.7 292 50.0
Thhalv10001499m.g Eutrema salsugineum HOM05D004815 ORTHO05D005742 3.2e-61 239.6 294 50.0
A03p25310 Brassica napus HOM05D004815 ORTHO05D005742 7.1e-61 238.4 292 50.0
arahy.Tifrunner.gnm1.ann1.32Q5MD Arachis hypogaea HOM05D004815 ORTHO05D005742 9.2e-61 238.0 289 47.8
Sed0004795 Sechium edule HOM05D004815 ORTHO05D005742 9.2e-61 238.0 264 48.5
BcaB02g09018 Brassica carinata HOM05D004815 ORTHO05D005742 2.1e-60 236.9 299 47.8
Carub.0004s2834 Capsella rubella HOM05D004815 ORTHO05D005742 2.7e-60 236.5 296 48.3
Hund27330 Selenicereus undatus HOM05D004815 ORTHO05D005742 4.6e-60 235.7 249 51.0
A05p05650 Brassica napus HOM05D004815 ORTHO05D005742 7.8e-60 235.0 295 48.8
PSO478G4379 Papaver somniferum HOM05D004815 ORTHO05D005742 1.0e-59 234.6 292 47.3
BraA05t19537Z Brassica rapa HOM05D004815 ORTHO05D005742 1.3e-59 234.2 295 48.8
BcaB01g03258 Brassica carinata HOM05D004815 ORTHO05D005742 2.3e-59 233.4 292 48.6
BcaC01g05112 Brassica carinata HOM05D004815 ORTHO05D005742 3.0e-59 233.0 297 49.2
BcaC02g12192 Brassica carinata HOM05D004815 ORTHO05D005742 6.6e-59 231.9 295 48.5
C03p30200 Brassica napus HOM05D004815 ORTHO05D005742 6.6e-59 231.9 296 49.0
C04p06610 Brassica napus HOM05D004815 ORTHO05D005742 6.6e-59 231.9 295 48.5
BolC4t22283H Brassica oleracea HOM05D004815 ORTHO05D005742 1.9e-58 230.3 295 48.1
CARHR140910 Cardamine hirsuta HOM05D004815 ORTHO05D005742 4.3e-58 229.2 294 47.3
MSTRG.20784 Avicennia marina HOM05D004815 ORTHO05D005742 7.3e-58 228.4 287 47.7
BolC3t15369H Brassica oleracea HOM05D004815 ORTHO05D005742 7.3e-58 228.4 296 48.3
PSO782G2788 Papaver somniferum HOM05D004815 ORTHO05D005742 7.3e-58 228.4 291 46.7
COL.COLO4_12639 Corchorus olitorius HOM05D004815 ORTHO05D005742 9.5e-58 228.0 174 63.8
Lalb_Chr19g0127171 Lupinus albus HOM05D004815 ORTHO05D005742 4.7e-57 225.7 292 47.3
HanXRQChr06g0169351 Helianthus annuus HOM05D004815 ORTHO05D005742 6.2e-57 225.3 313 45.7
CAN.G919.13 Capsicum annuum HOM05D004815 ORTHO05D005742 1.4e-56 224.2 283 45.6
Peaxi162Scf00114g00211 Petunia axillaris HOM05D004815 ORTHO05D005742 3.4e-55 219.5 283 45.2
BraA03t11735Z Brassica rapa HOM05D004815 ORTHO05D005742 7.6e-55 218.4 289 47.1
Solyc06g074460.4 Solanum lycopersicum HOM05D004815 ORTHO05D005742 9.9e-55 218.0 286 44.8
Nitab4.5_0001127g0010 Nicotiana tabacum HOM05D004815 ORTHO05D005742 1.1e-53 214.5 284 46.8
PGSC0003DMG400007146 Solanum tuberosum HOM05D004815 ORTHO05D005742 1.1e-53 214.5 278 45.0
unitig_749.g14360 Utricularia gibba HOM05D003518 ORTHO05D005164 1.9e-53 213.8 288 45.5
Sopen06g030930 Solanum pennellii HOM05D004815 ORTHO05D005742 7.1e-53 211.8 286 43.7
AUR62004281 Chenopodium quinoa HOM05D004815 ORTHO05D005742 2.1e-52 210.3 243 49.4
Dinv43746 Davidia involucrata HOM05D004815 ORTHO05D005742 6.0e-52 208.8 276 48.6
Nitab4.5_0005459g0020 Nicotiana tabacum HOM05D004815 ORTHO05D005742 1.0e-51 208.0 285 43.2
Ah.15g094120 Amaranthus hybridus HOM05D001215 ORTHO05D001387 6.6e-51 205.3 277 44.8
Dinv32412 Davidia involucrata HOM05D004815 ORTHO05D005742 4.7e-49 199.1 216 52.3
Ciclev10023945m.g Citrus clementina HOM05D004815 ORTHO05D005742 8.9e-48 194.9 287 42.9
Nitab4.5_0001901g0030 Nicotiana tabacum HOM05D004815 ORTHO05D005742 2.0e-47 193.7 283 41.7
SHI13492 Sapria himalayana HOM05D004815 ORTHO05D005742 3.4e-47 193.0 286 42.0
Zm00001eb208530 Zea mays HOM05D004815 ORTHO05D005742 4.9e-46 189.1 298 38.9
Os02g0123200 Oryza sativa ssp. japonica HOM05D004815 ORTHO05D005742 2.4e-45 186.8 300 40.0
ATR0757G223 Amborella trichopoda HOM05D004815 ORTHO05D005742 1.8e-40 170.6 188 48.9
HPP92_004960 Vanilla planifolia HOM05D004815 ORTHO05D005742 2.0e-39 167.2 290 37.2
Lalb_Chr01g0021231 Lupinus albus HOM05D004815 ORTHO05D005742 1.9e-37 160.6 296 37.8
Eucgr.D02393 Eucalyptus grandis HOM05D004815 ORTHO05D005742 1.2e-36 157.9 200 45.0
Gohir.A11G084200 Gossypium hirsutum HOM05D004815 ORTHO05D005742 1.5e-31 141.0 218 41.7
Mapoly0047s0037 Marchantia polymorpha HOM05D004815 ORTHO05D005742 7.6e-31 138.7 287 31.0
SEGI_15318 Sequoiadendron giganteum HOM05D004815 ORTHO05D005742 8.4e-30 135.2 296 33.1
Eucgr.D02410 Eucalyptus grandis HOM05D004815 ORTHO05D005742 1.1e-26 124.8 169 44.4
Pp3c20_6130 Physcomitrium patens HOM05D004815 ORTHO05D005742 6.9e-24 115.5 288 29.9
Eucgr.D02397 Eucalyptus grandis HOM05D004815 ORTHO05D005742 9.0e-24 115.2 149 44.3
SMO147G0187 Selaginella moellendorffii HOM05D004815 ORTHO05D005742 2.6e-23 113.6 259 31.7
AagrBONN_evm.TU.Sc2ySwM_228.5506 Anthoceros agrestis HOM05D004815 ORTHO05D005742 1.3e-22 111.3 270 25.9
CDE11G0368 Ceratophyllum demersum HOM05D004815 ORTHO05D005742 8.4e-22 108.6 150 40.0
CDE11G0585 Ceratophyllum demersum HOM05D004815 ORTHO05D005742 6.7e-19 99.0 93 54.8
Aa31LG6G10720 Aethionema arabicum HOM05D004815 ORTHO05D005742 8.7e-19 98.6 105 54.3
FAN10G0991 Fragaria x ananassa HOM05D004815 ORTHO05D005742 8.7e-19 98.6 73 64.4
COL.COLO4_24134 Corchorus olitorius HOM05D000638 ORTHO05D000801 5.3e-16 89.4 72 65.3
AagrBONN_evm.TU.Sc2ySwM_369.172 Anthoceros agrestis HOM05D004815 ORTHO05D005742 1.1e-13 81.6 259 25.1
Hund16967 Selenicereus undatus HOM05D004815 ORTHO05D005742 7.2e-13 79.0 85 51.8
MBI11_g13051_MAGBIO Magnolia biondii HOM05D004815 ORTHO05D005742 9.7e-10 68.6 92 43.5
ATR0757G181 Amborella trichopoda HOM05D004815 ORTHO05D005742 6.3e-09 65.9 91 41.8
CBR_g3181 Chara braunii HOM05D004815 ORTHO05D005742 1.4e-08 64.7 137 31.4

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (2 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (2 genes)
Coffea canephora (2 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (3 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (4 genes)
Magnolia biondii (2 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings