Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 4.7e-149 531.2 270 100.0
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 6.2e-117 424.5 264 80.7
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 3.1e-116 422.2 264 81.4
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 1.5e-115 419.9 243 85.6
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 2.7e-112 409.1 252 79.0
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 7.8e-112 407.5 253 78.3
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 1.1e-110 403.7 241 82.2
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 2.5e-110 402.5 264 76.1
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 7.3e-110 401.0 248 77.0
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 2.8e-109 399.1 240 80.4
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 3.6e-109 398.7 240 79.2
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 3.6e-109 398.7 240 79.2
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 6.2e-109 397.9 265 75.5
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 1.1e-108 397.1 252 79.0
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 1.5e-107 393.3 246 77.6
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 4.5e-107 391.7 240 77.9
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 3.8e-106 388.7 236 80.9
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 4.9e-106 388.3 240 79.6
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 4.9e-106 388.3 237 79.3
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 3.2e-105 385.6 248 76.6
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 7.1e-105 384.4 246 75.6
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 7.1e-105 384.4 237 81.0
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 1.2e-104 383.6 246 75.2
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 1.6e-104 383.3 248 74.2
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 2.1e-104 382.9 248 73.0
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 2.7e-104 382.5 242 78.5
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 2.7e-104 382.5 248 74.6
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 3.5e-104 382.1 259 73.7
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 6.0e-104 381.3 242 78.1
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 6.0e-104 381.3 269 74.7
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 2.3e-103 379.4 242 78.1
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 1.1e-102 377.1 241 75.1
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 1.5e-102 376.7 241 77.6
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 2.5e-102 375.9 263 70.7
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 1.3e-101 373.6 238 75.2
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 1.3e-101 373.6 265 71.3
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 1.6e-101 373.2 246 72.8
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 1.6e-101 373.2 246 72.8
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 2.1e-101 372.9 234 76.5
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 6.2e-101 371.3 248 72.6
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 8.1e-101 370.9 238 76.1
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 8.1e-101 370.9 248 72.6
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 1.1e-100 370.5 234 76.1
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 1.1e-100 370.5 234 76.1
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 1.4e-100 370.2 234 76.1
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 1.8e-100 369.8 234 76.1
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 2.4e-100 369.4 234 76.1
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 3.1e-100 369.0 234 76.1
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 3.1e-100 369.0 272 69.5
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 5.3e-100 368.2 234 75.2
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.2e-99 367.1 238 76.9
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 1.5e-99 366.7 247 71.3
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 2.6e-99 365.9 234 74.8
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 3.4e-99 365.5 236 76.7
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 1.0e-98 364.0 247 70.9
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 6.5e-98 361.3 256 71.1
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 6.5e-98 361.3 248 71.4
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 1.1e-97 360.5 245 72.7
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 2.5e-97 359.4 269 66.5
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 1.6e-96 356.7 250 70.0
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 2.1e-96 356.3 250 69.6
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 2.7e-96 355.9 237 71.7
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 2.7e-96 355.9 260 68.5
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 4.6e-96 355.1 263 68.1
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 7.9e-96 354.4 273 66.7
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 1.3e-95 353.6 234 72.2
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 2.3e-95 352.8 234 71.8
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 8.7e-95 350.9 250 68.8
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.5e-94 350.1 250 70.0
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 3.3e-94 349.0 250 70.0
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 4.8e-93 345.1 236 69.1
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 4.8e-93 345.1 246 69.1
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.4e-92 343.6 241 71.4
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 2.4e-92 342.8 238 68.5
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 6.9e-92 341.3 238 68.1
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 1.5e-91 340.1 250 67.6
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 2.0e-91 339.7 234 70.1
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 9.3e-89 330.9 213 75.6
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 9.3e-89 330.9 238 66.4
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 1.6e-88 330.1 203 82.8
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 7.9e-88 327.8 262 63.0
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 3.9e-87 325.5 213 75.1
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 6.7e-87 324.7 234 67.9
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 1.1e-86 323.9 256 68.8
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 2.5e-86 322.8 213 75.6
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 2.5e-86 322.8 228 70.2
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 3.1e-84 315.8 223 68.6
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 1.5e-83 313.5 197 77.7
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 1.5e-83 313.5 246 64.2
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 9.7e-78 294.3 234 59.0
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 1.4e-76 290.4 237 59.1
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 2.9e-74 282.7 238 61.8
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 6.7e-71 271.6 214 59.8
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 1.8e-68 263.5 236 55.1
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 7.0e-68 261.5 234 55.1
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 8.5e-66 254.6 244 53.3
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 4.7e-64 248.8 267 50.9
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 2.3e-63 246.5 235 49.8
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.3e-62 242.7 238 48.3
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.3e-62 242.7 238 48.3
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.4e-62 241.5 234 49.6
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 1.1e-60 237.7 213 54.0
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.8e-60 236.9 234 50.0
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.1e-60 235.7 234 49.6
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.1e-60 235.7 234 50.4
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.6e-59 233.8 234 49.6
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.6e-59 233.0 234 50.0
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 3.8e-42 176.0 103 75.7
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 1.5e-33 147.5 127 58.3
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 1.2e-32 144.4 235 40.0
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.0e-31 141.4 119 58.8
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 2.1e-11 73.9 39 87.2

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (0 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (6 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings