Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021565 Camellia sinensis var. sinensis HOM05D006200 ORTHO05D007569 2.9e-60 235.0 112 100.0
Actinidia09782 Actinidia chinensis HOM05D006200 ORTHO05D007569 1.5e-56 222.6 112 92.9
QL08p028355 Quercus lobata HOM05D006200 ORTHO05D007569 8.2e-55 216.9 111 90.1
Prupe.3G200400 Prunus persica HOM05D006200 ORTHO05D007569 1.8e-54 215.7 112 90.2
Nn1g07469 Nelumbo nucifera HOM05D006200 ORTHO05D007569 3.1e-54 214.9 112 89.3
Rhsim04G0037800 Rhododendron simsii HOM05D006200 ORTHO05D007569 5.3e-54 214.2 112 89.3
CAN.G1036.6 Capsicum annuum HOM05D006200 ORTHO05D007569 1.2e-53 213.0 112 87.5
PGSC0003DMG400006126 Solanum tuberosum HOM05D006200 ORTHO05D007569 1.2e-53 213.0 112 87.5
Nitab4.5_0001774g0080 Nicotiana tabacum HOM05D006200 ORTHO05D007569 1.5e-53 212.6 112 87.5
Hma1.2p1_2053F.1_g312740 Hydrangea macrophylla HOM05D006200 ORTHO05D007569 2.6e-53 211.8 112 87.5
Rhsim02G0017500 Rhododendron simsii HOM05D006200 ORTHO05D007569 2.6e-53 211.8 112 87.5
CiPaw.04G196600 Carya illinoinensis HOM05D006200 ORTHO05D007569 3.4e-53 211.5 112 88.4
Hma1.2p1_0545F.1_g176060 Hydrangea macrophylla HOM05D006200 ORTHO05D007569 5.8e-53 210.7 112 86.6
LjContig00029g0002447 Lotus japonicus HOM05D006200 ORTHO05D007569 5.8e-53 210.7 112 85.7
Dinv05360 Davidia involucrata HOM05D006200 ORTHO05D007569 7.6e-53 210.3 112 86.6
MD09G1123700 Malus domestica HOM05D006200 ORTHO05D007569 7.6e-53 210.3 112 87.5
MSTRG.14921 Avicennia marina HOM05D006200 ORTHO05D007569 1.0e-52 209.9 112 85.7
Haze_12649 Corylus avellana HOM05D006200 ORTHO05D007569 1.0e-52 209.9 112 87.5
SGA_v2.0_scaffold181G39681 Striga asiatica HOM05D006200 ORTHO05D007569 1.0e-52 209.9 112 85.7
Medtr5g085420 Medicago truncatula HOM05D006200 ORTHO05D007569 1.3e-52 209.5 112 84.8
Peaxi162Scf00776g00024 Petunia axillaris HOM05D006200 ORTHO05D007569 2.2e-52 208.8 112 88.4
Atru.chr6.3355 Acer truncatum HOM05D006200 ORTHO05D007569 2.9e-52 208.4 112 85.7
Ciclev10017136m.g Citrus clementina HOM05D006200 ORTHO05D007569 2.9e-52 208.4 112 86.6
Glyma.14G048700 Glycine max HOM05D006200 ORTHO05D007569 3.8e-52 208.0 112 83.9
Glyma.02G268700 Glycine max HOM05D006200 ORTHO05D007569 6.5e-52 207.2 112 83.9
Potri.014G164500 Populus trichocarpa HOM05D006200 ORTHO05D007569 6.5e-52 207.2 112 85.7
Sopen07g024150 Solanum pennellii HOM05D006200 ORTHO05D007569 8.4e-52 206.8 112 85.7
Solyc07g047700.4 Solanum lycopersicum HOM05D006200 ORTHO05D007569 1.1e-51 206.5 112 84.8
TPR.G25628 Trifolium pratense HOM05D006200 ORTHO05D007569 1.1e-51 206.5 112 83.0
CDE07G1212 Ceratophyllum demersum HOM05D006200 ORTHO05D007569 1.4e-51 206.1 112 83.9
Psat2g026360 Pisum sativum HOM05D006200 ORTHO05D007569 1.4e-51 206.1 112 83.0
CSS0018696 Camellia sinensis var. sinensis HOM05D006200 ORTHO05D007569 1.9e-51 205.7 100 99.0
MD17G1114500 Malus domestica HOM05D006200 ORTHO05D007569 4.2e-51 204.5 112 84.8
arahy.Tifrunner.gnm1.ann1.GBED9Y Arachis hypogaea HOM05D006200 ORTHO05D007569 7.1e-51 203.8 112 83.9
Manes.13G063700 Manihot esculenta HOM05D006200 ORTHO05D007569 7.1e-51 203.8 112 83.9
TAR626G0047 Trochodendron aralioides HOM05D006200 ORTHO05D007569 7.1e-51 203.8 112 82.1
Lalb_Chr04g0250001 Lupinus albus HOM05D006200 ORTHO05D007569 9.3e-51 203.4 112 83.0
Cfa014235 Carpinus fangiana HOM05D000160 ORTHO05D000496 1.2e-50 203.0 112 84.8
SalBow7G0450 Salvia bowleyana HOM05D006200 ORTHO05D007569 1.6e-50 202.6 112 82.1
ClCG02G002790 Citrullus lanatus HOM05D006200 ORTHO05D007569 2.1e-50 202.2 112 83.9
HPP92_012226 Vanilla planifolia HOM05D006200 ORTHO05D007569 2.1e-50 202.2 112 82.1
Migut.M00041 Erythranthe guttata HOM05D006200 ORTHO05D007569 3.5e-50 201.4 112 83.0
FvH4_6g40890 Fragaria vesca HOM05D006200 ORTHO05D007569 1.0e-49 199.9 112 83.0
FAN02G1931 Fragaria x ananassa HOM05D006200 ORTHO05D007569 1.0e-49 199.9 112 83.0
Lsat_1_v5_gn_5_121761 Lactuca sativa HOM05D006200 ORTHO05D007569 1.0e-49 199.9 112 80.4
Cc05_g02100 Coffea canephora HOM05D006200 ORTHO05D007569 1.3e-49 199.5 112 83.0
TWI36G1668 Tripterygium wilfordii HOM05D006200 ORTHO05D007569 1.8e-49 199.1 112 80.4
Sed0007295 Sechium edule HOM05D006200 ORTHO05D007569 2.3e-49 198.7 112 83.0
Cc02_g04700 Coffea canephora HOM05D006200 ORTHO05D007569 3.0e-49 198.4 112 82.1
RcHm_v2.0_Chr2g0156461 Rosa chinensis HOM05D006200 ORTHO05D007569 3.0e-49 198.4 112 83.0
ATR0624G019 Amborella trichopoda HOM05D006200 ORTHO05D007569 8.7e-49 196.8 112 80.4
THA.LOC104815354 Tarenaya hassleriana HOM05D006200 ORTHO05D007569 8.7e-49 196.8 112 81.2
Oeu040457.1 Olea europaea HOM05D006200 ORTHO05D007569 1.1e-48 196.4 112 79.5
Carub.0003s2650 Capsella rubella HOM05D006200 ORTHO05D007569 1.5e-48 196.1 112 78.6
PSO675G7132 Papaver somniferum HOM05D006200 ORTHO05D007569 1.9e-48 195.7 112 78.6
MELO3C024201.2 Cucumis melo HOM05D006200 ORTHO05D007569 2.5e-48 195.3 117 80.3
vmacro09406 Vaccinium macrocarpon HOM05D006200 ORTHO05D007569 2.5e-48 195.3 145 67.6
CANSAT64G0383 Cannabis sativa HOM05D006200 ORTHO05D007569 4.3e-48 194.5 112 79.5
CARHR102920 Cardamine hirsuta HOM05D006200 ORTHO05D007569 4.3e-48 194.5 112 79.5
Sed0012997 Sechium edule HOM05D006200 ORTHO05D007569 5.7e-48 194.1 110 82.7
Aqoxy4G02230 Aquilegia oxysepala HOM05D006200 ORTHO05D007569 7.4e-48 193.7 112 79.5
HanXRQChr10g0306841 Helianthus annuus HOM05D006200 ORTHO05D007569 7.4e-48 193.7 112 78.6
PSO541G4622 Papaver somniferum HOM05D006200 ORTHO05D007569 7.4e-48 193.7 112 77.7
AL3G42530 Arabidopsis lyrata HOM05D006200 ORTHO05D007569 1.3e-47 193.0 112 78.6
AT2G04900 Arabidopsis thaliana HOM05D006200 ORTHO05D007569 1.3e-47 193.0 112 78.6
C07p10040 Brassica napus HOM05D006200 ORTHO05D007569 1.6e-47 192.6 112 78.6
BraA07t28456Z Brassica rapa HOM05D006200 ORTHO05D007569 1.6e-47 192.6 112 78.6
Thhalv10002727m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 1.6e-47 192.6 112 78.6
BcaB06g26789 Brassica carinata HOM05D006200 ORTHO05D007569 2.2e-47 192.2 112 78.6
Os03g0751000 Oryza sativa ssp. japonica HOM05D006200 ORTHO05D007569 2.8e-47 191.8 111 77.5
Sp3g23500 Schrenkiella parvula HOM05D006200 ORTHO05D007569 2.8e-47 191.8 112 77.7
BcaC06g35887 Brassica carinata HOM05D006200 ORTHO05D007569 4.8e-47 191.0 112 77.7
BolC7t41451H Brassica oleracea HOM05D006200 ORTHO05D007569 4.8e-47 191.0 112 77.7
A07p06630 Brassica napus HOM05D006200 ORTHO05D007569 6.3e-47 190.7 112 77.7
FAN09G2038 Fragaria x ananassa HOM05D006200 ORTHO05D007569 1.1e-46 189.9 127 73.2
FAN14G5749 Fragaria x ananassa HOM05D006200 ORTHO05D007569 1.1e-46 189.9 127 73.2
FAN05G3226 Fragaria x ananassa HOM05D006200 ORTHO05D007569 3.1e-46 188.3 127 72.4
Cpa.g.sc136.18 Carica papaya HOM05D006200 ORTHO05D007569 5.3e-46 187.6 112 76.8
Lj8A134G80 Lonicera japonica HOM05D006200 ORTHO05D007569 5.3e-46 187.6 98 89.8
Zm00001eb057520 Zea mays HOM05D006200 ORTHO05D007569 9.0e-46 186.8 111 75.7
Aa31sc107G30 Aethionema arabicum HOM05D006200 ORTHO05D007569 1.0e-44 183.3 141 65.2
GSVIVG01030523001 Vitis vinifera HOM05D006200 ORTHO05D007569 2.2e-44 182.2 107 77.6
Thecc.01G190500 Theobroma cacao HOM05D006200 ORTHO05D007569 5.0e-44 181.0 107 77.6
GSVIVG01030518001 Vitis vinifera HOM05D006200 ORTHO05D007569 5.0e-44 181.0 107 76.6
Manes.12G061800 Manihot esculenta HOM05D006200 ORTHO05D007569 6.5e-44 180.6 108 77.8
Sabra14G0125300 Salix brachista HOM05D006200 ORTHO05D007569 3.2e-43 178.3 139 64.0
SEGI_07661 Sequoiadendron giganteum HOM05D006200 ORTHO05D007569 1.2e-42 176.4 112 72.3
Zm00001eb181090 Zea mays HOM05D006200 ORTHO05D007569 1.2e-42 176.4 110 73.6
Gohir.A07G167000 Gossypium hirsutum HOM05D006200 ORTHO05D007569 2.1e-42 175.6 107 73.8
Gohir.D07G172300 Gossypium hirsutum HOM05D006200 ORTHO05D007569 2.1e-42 175.6 107 73.8
Gorai.001G192600 Gossypium raimondii HOM05D006200 ORTHO05D007569 2.1e-42 175.6 107 73.8
Duzib138G0810 Durio zibethinus HOM05D006200 ORTHO05D007569 2.3e-41 172.2 112 68.8
ECA234G3013 Erigeron canadensis HOM05D006200 ORTHO05D007569 2.3e-41 172.2 98 81.6
Eucgr.A01040 Eucalyptus grandis HOM05D006200 ORTHO05D007569 2.5e-40 168.7 98 80.6
AUR62029092 Chenopodium quinoa HOM05D006200 ORTHO05D007569 1.7e-39 166.0 97 76.3
MBI16_g28733_MAGBIO Magnolia biondii HOM05D006200 ORTHO05D007569 4.8e-39 164.5 99 76.8
Zm00001eb025380 Zea mays HOM05D006200 ORTHO05D007569 1.1e-38 163.3 127 62.2
COL.COLO4_33018 Corchorus olitorius HOM05D006200 ORTHO05D007569 3.4e-37 158.3 155 51.6
Mapoly0007s0279 Marchantia polymorpha HOM05D006200 ORTHO05D007569 2.9e-36 155.2 111 64.0
DCAR_021101 Daucus carota HOM05D006200 ORTHO05D007569 1.0e-33 146.7 79 82.3
Phvul.008G213600 Phaseolus vulgaris HOM05D006200 ORTHO05D007569 1.4e-33 146.4 79 81.0
Pp3c6_18880 Physcomitrium patens HOM05D006200 ORTHO05D007569 1.4e-33 146.4 108 60.2
arahy.Tifrunner.gnm1.ann1.HJ95Y2 Arachis hypogaea HOM05D006200 ORTHO05D007569 3.0e-33 145.2 79 82.3
Zm00001eb402120 Zea mays HOM05D006200 ORTHO05D007569 1.1e-32 143.3 109 64.2
SMO356G0472 Selaginella moellendorffii HOM05D006200 ORTHO05D007569 1.5e-32 142.9 88 69.3
Pp3c6_18900 Physcomitrium patens HOM05D006200 ORTHO05D007569 4.8e-31 137.9 98 65.3
MSTRG.6639 Avicennia marina HOM05D006200 ORTHO05D007569 1.8e-30 136.0 75 86.7
CsaV3_7G002590 Cucumis sativus L. HOM05D006200 ORTHO05D007569 5.3e-30 134.4 75 86.7
Cre12.g543050 Chlamydomonas reinhardtii HOM05D006200 ORTHO05D007569 2.1e-26 122.5 108 50.9
Zm00001eb093000 Zea mays HOM05D006200 ORTHO05D007569 8.8e-25 117.1 109 55.0
SHI10134 Sapria himalayana HOM05D006200 ORTHO05D007569 1.5e-24 116.3 82 65.9
AUR62015021 Chenopodium quinoa HOM05D006200 ORTHO05D007569 5.7e-24 114.4 64 73.4
Zm00001eb414470 Zea mays HOM05D006200 ORTHO05D007569 1.3e-23 113.2 69 75.4
PGR042G1757 Punica granatum HOM05D006200 ORTHO05D007569 1.7e-23 112.8 64 76.6
Thhalv10009367m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 3.7e-23 111.7 64 73.4
Thhalv10016039m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 6.3e-23 110.9 64 71.9
Thhalv10023849m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 1.1e-22 110.2 64 71.9
Thhalv10027363m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 9.1e-22 107.1 64 70.3
Ah.01g013830 Amaranthus hybridus HOM05D004982 ORTHO05D007569 1.2e-21 106.7 64 70.3
AagrBONN_evm.TU.Sc2ySwM_368.977 Anthoceros agrestis HOM05D006200 ORTHO05D007569 5.0e-20 101.3 64 59.4
MD17G1249100 Malus domestica HOM05D006200 ORTHO05D007569 9.4e-19 97.1 50 84.0
Pp3c16_4930 Physcomitrium patens HOM05D006200 ORTHO05D007569 5.2e-17 91.3 69 59.4
Pp3c16_5110 Physcomitrium patens HOM05D006200 ORTHO05D007569 5.2e-17 91.3 69 59.4
Hund21568 Selenicereus undatus HOM05D006200 ORTHO05D007569 3.7e-15 85.1 152 38.8
Zm00001eb125940 Zea mays HOM05D000001 ORTHO05D007569 5.9e-13 77.8 45 80.0
Aqoxy5G00520 Aquilegia oxysepala HOM05D006200 ORTHO05D007569 5.0e-12 74.7 40 82.5
C03p34670 Brassica napus HOM05D006200 ORTHO05D007569 4.0e-09 65.1 50 70.0
BolC3t15778H Brassica oleracea HOM05D006200 ORTHO05D007569 4.0e-09 65.1 50 70.0
RcHm_v2.0_Chr5g0026981 Rosa chinensis HOM05D006200 ORTHO05D007569 5.2e-09 64.7 37 70.3

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (0 genes)
Brassica carinata (2 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (5 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (3 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (1 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (4 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (0 genes)
Vitis vinifera (2 genes)
Zea mays (7 genes)

Program Settings