Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.8e-75 285.8 144 100.0
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.0e-49 200.3 139 79.1
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.0e-49 200.3 139 79.1
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.0e-49 200.3 139 79.1
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 5.6e-48 194.5 139 77.0
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 1.1e-43 180.3 138 73.9
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 3.2e-43 178.7 139 72.7
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 4.1e-43 178.3 141 70.2
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 4.1e-43 178.3 139 71.9
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 3.5e-42 175.3 139 71.2
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 3.9e-41 171.8 137 69.3
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 5.0e-41 171.4 139 71.2
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 1.9e-40 169.5 138 71.0
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 2.5e-40 169.1 138 67.4
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 3.3e-40 168.7 138 69.6
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 3.3e-40 168.7 139 68.3
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 5.6e-40 167.9 148 64.9
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 5.6e-40 167.9 138 67.4
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 5.6e-40 167.9 139 68.3
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 7.3e-40 167.5 138 68.1
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 7.3e-40 167.5 139 69.1
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 7.3e-40 167.5 139 69.1
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 7.3e-40 167.5 136 69.1
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 9.5e-40 167.2 139 66.9
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 9.5e-40 167.2 139 66.9
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 9.5e-40 167.2 139 66.9
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.6e-39 166.4 139 66.9
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 2.1e-39 166.0 139 66.2
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 3.6e-39 165.2 139 68.3
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 3.6e-39 165.2 139 68.3
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 3.6e-39 165.2 139 68.3
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 3.6e-39 165.2 138 71.0
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 3.6e-39 165.2 141 66.0
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 3.6e-39 165.2 139 68.3
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 3.6e-39 165.2 139 68.3
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 6.2e-39 164.5 140 67.9
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 8.1e-39 164.1 144 68.1
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 8.1e-39 164.1 138 68.1
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 1.1e-38 163.7 137 67.9
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.8e-38 162.9 141 66.7
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.8e-38 162.9 139 68.3
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 4.0e-38 161.8 139 66.2
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 5.2e-38 161.4 138 65.9
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 5.2e-38 161.4 139 68.3
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 6.8e-38 161.0 140 67.1
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 6.8e-38 161.0 140 67.1
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 8.9e-38 160.6 139 69.1
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 8.9e-38 160.6 139 66.2
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 1.2e-37 160.2 141 65.2
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 2.0e-37 159.5 139 65.5
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 3.4e-37 158.7 139 65.5
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 3.4e-37 158.7 140 65.7
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 5.8e-37 157.9 138 64.5
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 5.8e-37 157.9 139 65.5
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 7.5e-37 157.5 139 64.7
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 1.3e-36 156.8 139 66.2
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 1.3e-36 156.8 140 65.0
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 1.7e-36 156.4 140 66.4
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 1.7e-36 156.4 139 63.3
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 2.2e-36 156.0 142 64.8
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 2.2e-36 156.0 139 65.5
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 2.2e-36 156.0 140 66.4
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 2.9e-36 155.6 142 62.7
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 6.4e-36 154.5 140 65.0
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 1.1e-35 153.7 140 65.7
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 1.4e-35 153.3 139 64.0
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 1.9e-35 152.9 140 62.1
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 2.4e-35 152.5 140 64.3
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 2.4e-35 152.5 140 64.3
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 4.1e-35 151.8 140 63.6
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 4.1e-35 151.8 140 64.3
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 5.4e-35 151.4 139 63.3
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 5.4e-35 151.4 140 62.1
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 9.2e-35 150.6 140 62.9
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 1.2e-34 150.2 139 63.3
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 7.8e-34 147.5 145 62.8
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.3e-33 146.7 134 63.4
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 1.7e-33 146.4 145 61.4
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 1.7e-33 146.4 145 61.4
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 1.7e-33 146.4 145 61.4
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 2.3e-33 146.0 148 60.1
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 3.9e-33 145.2 139 61.9
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 3.9e-33 145.2 134 62.7
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 6.6e-33 144.4 134 62.7
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 8.6e-33 144.1 147 58.5
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 4.3e-32 141.7 140 58.6
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 5.6e-32 141.4 146 57.5
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 5.6e-32 141.4 145 58.6
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 5.6e-32 141.4 140 61.4
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 5.6e-32 141.4 143 56.6
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 7.3e-32 141.0 140 56.4
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 7.3e-32 141.0 140 61.4
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 9.5e-32 140.6 142 57.0
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 9.5e-32 140.6 146 56.2
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 1.2e-31 140.2 146 57.5
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 1.6e-31 139.8 141 61.0
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 2.1e-31 139.4 141 61.0
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 2.8e-31 139.0 146 55.5
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 2.8e-31 139.0 140 60.0
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 4.7e-31 138.3 147 57.1
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 4.7e-31 138.3 142 59.2
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 6.2e-31 137.9 145 56.6
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 1.1e-30 137.1 150 55.3
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 9.9e-29 130.6 138 55.8
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 9.9e-29 130.6 138 55.8
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 9.2e-27 124.0 146 52.7
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 1.2e-26 123.6 145 51.7
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 2.7e-26 122.5 115 64.3
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 3.9e-25 118.6 145 53.1
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 1.5e-24 116.7 101 63.4
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 2.5e-24 115.9 123 57.7
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 1.2e-23 113.6 133 54.1
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 1.6e-23 113.2 139 52.5
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 2.8e-23 112.5 134 53.0
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 3.6e-23 112.1 110 64.5
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 3.1e-22 109.0 138 52.2
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 5.8e-21 104.8 152 46.1
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 2.9e-20 102.4 107 60.7
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 5.4e-19 98.2 68 76.5
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 1.0e-17 94.0 132 43.9
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 1.3e-17 93.6 135 44.4
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 3.0e-17 92.4 132 43.2
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 3.9e-17 92.0 67 73.1
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 3.9e-17 92.0 67 73.1
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 2.5e-16 89.4 67 73.1
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 9.6e-16 87.4 138 43.5
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 9.6e-16 87.4 129 42.6
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 1.6e-15 86.7 125 48.0
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 4.8e-15 85.1 85 60.0
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 1.1e-14 84.0 132 41.7
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 4.0e-14 82.0 70 62.9
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 9.0e-14 80.9 67 64.2
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 2.0e-13 79.7 68 63.2
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 3.4e-13 79.0 67 58.2
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 3.4e-13 79.0 67 58.2
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 3.4e-13 79.0 68 64.7
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 9.9e-13 77.4 132 41.7
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 4.9e-12 75.1 68 58.8
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 6.4e-12 74.7 68 58.8
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 8.4e-12 74.3 68 57.4
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.0e-09 67.4 66 54.5
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 1.8e-09 66.6 66 54.5
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 1.1e-08 63.9 137 32.8
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 4.3e-08 62.0 101 39.6
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 4.8e-07 58.5 66 48.5

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (0 genes)
Avicennia marina (1 genes)
Beta vulgaris (5 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (5 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (6 genes)
Gossypium raimondii (3 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (4 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (4 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (3 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (0 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (0 genes)
Zea mays (1 genes)

Program Settings