Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020926 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 0.0e+00 1094.0 525 100.0
CSS0020951 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 0.0e+00 1092.0 525 99.6
Actinidia22849 Actinidia chinensis HOM05D004979 ORTHO05D006190 8.5e-272 939.9 520 85.4
Rhsim01G0213000 Rhododendron simsii HOM05D004979 ORTHO05D006190 2.2e-267 925.2 525 84.6
Oeu061912.1 Olea europaea HOM05D004979 ORTHO05D006190 1.8e-261 905.6 524 80.3
Cc02_g36050 Coffea canephora HOM05D004979 ORTHO05D006190 1.0e-256 889.8 522 77.6
Cc02_g36100 Coffea canephora HOM05D004979 ORTHO05D006190 2.3e-256 888.6 522 77.6
MSTRG.16439 Avicennia marina HOM05D004979 ORTHO05D006190 1.5e-255 885.9 524 77.9
Migut.B00894 Erythranthe guttata HOM05D004979 ORTHO05D006190 4.4e-252 874.4 521 77.4
Dinv24526 Davidia involucrata HOM05D004979 ORTHO05D006190 3.9e-248 861.3 520 78.7
RcHm_v2.0_Chr1g0332651 Rosa chinensis HOM05D004979 ORTHO05D006190 1.4e-245 852.8 518 75.9
MD08G1246100 Malus domestica HOM05D004979 ORTHO05D006190 1.8e-245 852.4 514 77.2
Manes.08G106500 Manihot esculenta HOM05D004979 ORTHO05D006190 1.2e-244 849.7 518 76.3
FAN01G0279 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.5e-244 849.4 516 76.2
Atru.chr12.1512 Acer truncatum HOM05D004979 ORTHO05D006190 1.7e-243 845.9 518 75.9
PGSC0003DMG400001886 Solanum tuberosum HOM05D004979 ORTHO05D006190 2.2e-243 845.5 513 76.8
QL03p011287 Quercus lobata HOM05D004979 ORTHO05D006190 8.3e-243 843.6 527 74.6
PGR004G0062 Punica granatum HOM05D004979 ORTHO05D006190 1.4e-242 842.8 517 75.0
PGR117G0001 Punica granatum HOM05D004979 ORTHO05D006190 2.4e-242 842.0 520 75.0
CAN.G756.6 Capsicum annuum HOM05D004979 ORTHO05D006190 4.1e-242 841.3 513 75.8
Sed0004859 Sechium edule HOM05D004979 ORTHO05D006190 1.2e-241 839.7 520 75.8
MD15G1441300 Malus domestica HOM05D004979 ORTHO05D006190 2.1e-241 839.0 514 76.3
EL10Ac8g20414 Beta vulgaris HOM05D004979 ORTHO05D006190 6.0e-241 837.4 522 73.4
Potri.013G000600 Populus trichocarpa HOM05D004979 ORTHO05D006190 7.8e-241 837.0 518 75.9
CiPaw.01G000500 Carya illinoinensis HOM05D004979 ORTHO05D006190 1.0e-240 836.6 520 76.2
FAN06G2997 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.0e-240 836.6 538 73.0
Solyc04g055190.4 Solanum lycopersicum HOM05D004979 ORTHO05D006190 1.0e-240 836.6 513 75.8
TPR.G18815 Trifolium pratense HOM05D004979 ORTHO05D006190 5.1e-240 834.3 519 73.4
arahy.Tifrunner.gnm1.ann1.4I4LKP Arachis hypogaea HOM05D004979 ORTHO05D006190 3.3e-239 831.6 519 73.2
Ciclev10028175m.g Citrus clementina HOM05D004979 ORTHO05D006190 9.5e-239 830.1 519 74.4
Medtr1g110490 Medicago truncatula HOM05D004979 ORTHO05D006190 1.2e-238 829.7 526 72.6
Lalb_Chr04g0254641 Lupinus albus HOM05D004979 ORTHO05D006190 1.6e-238 829.3 519 72.6
TWI60G1029 Tripterygium wilfordii HOM05D004979 ORTHO05D006190 2.1e-238 828.9 514 74.5
TPR.G33173 Trifolium pratense HOM05D004979 ORTHO05D006190 2.8e-238 828.6 519 72.6
Aqoxy1G02435 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 4.7e-238 827.8 517 74.9
CAN.G1715.7 Capsicum annuum HOM05D004979 ORTHO05D006190 8.1e-238 827.0 513 75.0
Thecc.05G331000 Theobroma cacao HOM05D004979 ORTHO05D006190 1.1e-237 826.6 517 74.5
CANSAT56G2810 Cannabis sativa HOM05D004979 ORTHO05D006190 1.4e-237 826.2 513 74.9
Psat6g226240 Pisum sativum HOM05D004979 ORTHO05D006190 6.8e-237 823.9 517 72.9
Glyma.10G273100 Glycine max HOM05D004979 ORTHO05D006190 1.2e-236 823.2 519 72.8
MELO3C019579.2 Cucumis melo HOM05D004979 ORTHO05D006190 1.5e-236 822.8 518 74.7
vmacro19800 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 2.6e-236 822.0 696 62.1
CsaV3_6G013140 Cucumis sativus L. HOM05D004979 ORTHO05D006190 3.4e-236 821.6 518 75.1
Sabra13G0000500 Salix brachista HOM05D004979 ORTHO05D006190 2.9e-235 818.5 532 72.7
Eucgr.I02672 Eucalyptus grandis HOM05D004979 ORTHO05D006190 8.4e-235 817.0 517 73.1
Glyma.20G116900 Glycine max HOM05D004979 ORTHO05D006190 1.4e-234 816.2 519 71.9
Lj5g0020513 Lotus japonicus HOM05D004979 ORTHO05D006190 1.4e-234 816.2 513 73.1
AL1G67180 Arabidopsis lyrata HOM05D004979 ORTHO05D006190 2.4e-234 815.5 518 69.5
ECA234G3247 Erigeron canadensis HOM05D004979 ORTHO05D006190 5.4e-234 814.3 498 74.7
Hund05397 Selenicereus undatus HOM05D004979 ORTHO05D006190 1.3e-232 809.7 489 75.1
arahy.Tifrunner.gnm1.ann1.Q958TZ Arachis hypogaea HOM05D004979 ORTHO05D006190 3.9e-232 808.1 577 66.4
Thhalv10023409m.g Eutrema salsugineum HOM05D004979 ORTHO05D006190 5.1e-232 807.7 516 69.8
VMungo0720G1588 Vigna mungo HOM05D004979 ORTHO05D006190 8.6e-232 807.0 518 71.4
PSO357G0276 Papaver somniferum HOM05D004979 ORTHO05D006190 4.3e-231 804.7 512 71.5
AT1G57600 Arabidopsis thaliana HOM05D004979 ORTHO05D006190 5.6e-231 804.3 516 68.6
HanXRQChr11g0327151 Helianthus annuus HOM05D004979 ORTHO05D006190 9.6e-231 803.5 483 77.2
PSO170G1924 Papaver somniferum HOM05D004979 ORTHO05D006190 1.6e-230 802.7 512 71.3
CARHR054720 Cardamine hirsuta HOM05D004979 ORTHO05D006190 6.2e-230 800.8 516 69.2
THA.LOC104816839 Tarenaya hassleriana HOM05D004979 ORTHO05D006190 1.4e-229 799.7 514 70.0
Phvul.007G028500 Phaseolus vulgaris HOM05D004979 ORTHO05D006190 1.8e-229 799.3 518 71.2
Carub.0002s0703 Capsella rubella HOM05D004979 ORTHO05D006190 2.0e-228 795.8 519 68.4
Gohir.D13G003600 Gossypium hirsutum HOM05D004979 ORTHO05D006190 1.4e-226 789.6 514 71.0
vmacro22232 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 4.2e-226 788.1 554 72.0
Gohir.A13G003700 Gossypium hirsutum HOM05D004979 ORTHO05D006190 7.1e-226 787.3 514 70.6
Gorai.013G003500 Gossypium raimondii HOM05D004979 ORTHO05D006190 2.1e-225 785.8 515 71.1
Sp2g05910 Schrenkiella parvula HOM05D004979 ORTHO05D006190 4.6e-225 784.6 517 67.9
SpUn0028_0030 Schrenkiella parvula HOM05D004979 ORTHO05D006190 4.6e-225 784.6 517 67.9
BolC9t55284H Brassica oleracea HOM05D004979 ORTHO05D006190 1.3e-224 783.1 517 68.5
unitig_22.g6127 Utricularia gibba HOM05D004979 ORTHO05D006190 1.3e-224 783.1 563 65.7
BcaC04g22085 Brassica carinata HOM05D004979 ORTHO05D006190 6.6e-224 780.8 517 68.1
Nitab4.5_0000081g0190 Nicotiana tabacum HOM05D004979 ORTHO05D006190 6.6e-224 780.8 516 71.9
BraA09t37507Z Brassica rapa HOM05D004979 ORTHO05D006190 1.3e-222 776.5 517 67.5
BcaB07g31145 Brassica carinata HOM05D004979 ORTHO05D006190 4.8e-222 774.6 517 67.3
SGA_v2.0_scaffold279G46769 Striga asiatica HOM05D004979 ORTHO05D006190 1.1e-221 773.5 521 70.2
Duzib114G0072 Durio zibethinus HOM05D004979 ORTHO05D006190 2.6e-220 768.8 510 71.8
C09p23650 Brassica napus HOM05D004979 ORTHO05D006190 7.6e-220 767.3 541 65.1
Lj4g0015757 Lotus japonicus HOM05D004979 ORTHO05D006190 2.4e-218 762.3 469 73.8
A09p18870 Brassica napus HOM05D004979 ORTHO05D006190 5.4e-218 761.1 542 64.4
AUR62014845 Chenopodium quinoa HOM05D004979 ORTHO05D006190 5.4e-218 761.1 525 69.0
Os05g0144000 Oryza sativa ssp. japonica HOM05D004979 ORTHO05D006190 4.3e-215 751.5 516 66.5
ATR0730G180 Amborella trichopoda HOM05D004979 ORTHO05D006190 1.6e-214 749.6 530 65.1
Peaxi162Scf00212g00515 Petunia axillaris HOM05D004979 ORTHO05D006190 4.8e-214 748.0 517 70.4
Zm00001eb108680 Zea mays HOM05D004979 ORTHO05D006190 1.1e-213 746.9 516 66.3
Aa31LG2G11270 Aethionema arabicum HOM05D004979 ORTHO05D006190 9.9e-212 740.3 521 66.8
TAR636G2920 Trochodendron aralioides HOM05D004979 ORTHO05D006190 1.3e-211 740.0 441 78.9
SEGI_04903 Sequoiadendron giganteum HOM05D004979 ORTHO05D006190 4.0e-205 718.4 524 62.2
Lj9A238G55 Lonicera japonica HOM05D004979 ORTHO05D006190 1.0e-203 713.8 503 69.4
Haze_12430 Corylus avellana HOM05D004979 ORTHO05D006190 1.1e-202 710.3 585 62.1
Sc05g0004380 Simmondsia chinensis HOM05D004979 ORTHO05D006190 1.1e-202 710.3 435 74.7
FAN03G1290 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.0e-200 703.7 580 61.6
FAN23G0202 Fragaria x ananassa HOM05D004979 ORTHO05D006190 3.1e-197 692.2 523 64.6
Lsat_1_v5_gn_5_7121 Lactuca sativa HOM05D004979 ORTHO05D006190 6.9e-197 691.0 500 68.0
Nitab4.5_0002303g0020 Nicotiana tabacum HOM05D004979 ORTHO05D006190 1.5e-196 689.9 516 65.3
Prupe.1G583400 Prunus persica HOM05D004979 ORTHO05D006190 6.5e-195 684.5 402 78.4
FvH4_7g05560 Fragaria vesca HOM05D004979 ORTHO05D006190 1.6e-190 669.8 393 77.1
HPP92_023772 Vanilla planifolia HOM05D004979 ORTHO05D006190 1.1e-178 630.6 420 67.9
Nn7g38157 Nelumbo nucifera HOM05D004979 ORTHO05D006190 2.7e-177 625.9 490 62.7
Mapoly0050s0014 Marchantia polymorpha HOM05D004979 ORTHO05D006190 2.1e-169 599.7 523 53.3
GSVIVG01007211001 Vitis vinifera HOM05D004979 ORTHO05D006190 3.6e-169 599.0 362 78.5
Rhsim04G0165200 Rhododendron simsii HOM05D004979 ORTHO05D006190 2.0e-167 593.2 358 80.7
Pp3c2_38270 Physcomitrium patens HOM05D004979 ORTHO05D006190 9.1e-165 584.3 531 52.5
SalBow5G4822 Salvia bowleyana HOM05D004979 ORTHO05D006190 7.2e-162 574.7 334 79.3
GSVIVG01006954001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.3e-155 553.9 304 85.2
FAN10G2429 Fragaria x ananassa HOM05D004979 ORTHO05D006190 4.2e-154 548.9 516 55.6
SMO145G0201 Selaginella moellendorffii HOM05D004979 ORTHO05D006190 4.2e-154 548.9 504 53.6
DCAR_006591 Daucus carota HOM05D004979 ORTHO05D006190 1.1e-149 534.3 517 54.7
SalBow3G2171 Salvia bowleyana HOM05D004979 ORTHO05D006190 7.7e-148 528.1 350 71.7
Lj5C315T9 Lonicera japonica HOM05D004979 ORTHO05D006190 1.4e-141 507.3 286 83.2
CBR_g16989 Chara braunii HOM05D004979 ORTHO05D006190 5.9e-140 501.9 549 46.1
AagrBONN_evm.TU.Sc2ySwM_344.2018 Anthoceros agrestis HOM05D004979 ORTHO05D006190 2.0e-135 486.9 435 52.4
GSVIVG01002014001 Vitis vinifera HOM05D004979 ORTHO05D006190 2.1e-129 466.8 252 85.7
AUR62017041 Chenopodium quinoa HOM05D004979 ORTHO05D006190 2.0e-127 460.3 345 64.3
Hma1.2p1_0759F.1_g213770 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 1.6e-116 424.1 231 85.7
Hma1.2p1_0759F.1_g213813 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 1.6e-116 424.1 231 85.7
COL.COLO4_28214 Corchorus olitorius HOM05D004979 ORTHO05D006190 1.3e-115 421.0 286 70.6
Sopen04g025050 Solanum pennellii HOM05D004979 ORTHO05D006190 1.4e-112 411.0 230 80.0
Ca_17455_v3 Cicer arietinum L. HOM05D004979 ORTHO05D006190 5.8e-111 405.6 229 80.8
Dinv22420 Davidia involucrata HOM05D004979 ORTHO05D006190 3.1e-96 356.7 526 42.4
GSVIVG01007430001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.0e-86 325.1 207 72.9
GSVIVG01007210001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.3e-86 324.7 208 71.6
Cpa.g.sc46.4 Carica papaya HOM05D004979 ORTHO05D006190 6.3e-81 305.8 165 84.2
Cfa022844 Carpinus fangiana HOM05D004979 ORTHO05D006190 1.3e-78 298.1 560 33.4
Actinidia01657 Actinidia chinensis HOM05D004979 ORTHO05D006190 1.3e-75 288.1 365 50.1
Cre14.g617150 Chlamydomonas reinhardtii HOM05D004979 ORTHO05D006190 5.1e-75 286.2 538 34.8
Cpa.g.sc46.2 Carica papaya HOM05D004979 ORTHO05D006190 5.7e-74 282.7 240 59.2
MCO11G558 Micromonas commoda HOM05D004979 ORTHO05D006190 4.1e-72 276.6 490 36.5
PRCOL_00000039 Prasinoderma coloniale HOM05D004979 ORTHO05D006190 2.6e-71 273.9 514 35.2
CAN.G1164.35 Capsicum annuum HOM05D004979 ORTHO05D006190 1.9e-69 267.7 169 74.6
HanXRQChr14g0439781 Helianthus annuus HOM05D004979 ORTHO05D006190 6.1e-60 236.1 190 60.0
SHI20228 Sapria himalayana HOM05D004979 ORTHO05D006190 4.2e-53 213.4 262 46.2
DCAR_032148 Daucus carota HOM05D004979 ORTHO05D006190 9.1e-48 195.7 336 38.1
ClCG03G002030 Citrullus lanatus HOM05D004979 ORTHO05D006190 8.8e-43 179.1 161 58.4
Lsat_1_v5_gn_8_74721 Lactuca sativa HOM05D004979 ORTHO05D006190 3.6e-36 157.1 85 77.6
Actinidia27722 Actinidia chinensis HOM05D004979 ORTHO05D006190 9.8e-34 149.1 194 46.9
CDE04G1277 Ceratophyllum demersum HOM05D004979 ORTHO05D006190 5.4e-32 143.3 99 66.7
MBI07_g39750_MAGBIO Magnolia biondii HOM05D004979 ORTHO05D006190 1.2e-31 142.1 116 61.2
GSVIVG01004371001 Vitis vinifera HOM05D004979 ORTHO05D006190 3.5e-31 140.6 103 67.0
QL03p011256 Quercus lobata HOM05D004979 ORTHO05D006190 4.5e-31 140.2 79 84.8
Lsat_1_v5_gn_8_74741 Lactuca sativa HOM05D004979 ORTHO05D006190 1.3e-30 138.7 106 66.0
Rhsim05G0125000 Rhododendron simsii HOM05D004979 ORTHO05D006190 5.7e-26 123.2 270 35.2
SHI32754 Sapria himalayana HOM05D001374 ORTHO05D004296 1.4e-24 118.6 119 50.4
FAN19G1386 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.6e-23 115.2 94 59.6
Aqoxy2G02599 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 5.0e-14 83.6 41 80.5
SHI20227 Sapria himalayana HOM05D004979 ORTHO05D006190 9.5e-13 79.3 51 68.6
AagrBONN_evm.TU.Sc2ySwM_117.715 Anthoceros agrestis HOM05D004979 ORTHO05D006190 6.2e-12 76.6 102 40.2
Sc05g0003730 Simmondsia chinensis HOM05D004979 ORTHO05D006190 4.4e-10 70.5 80 48.8
Medtr3g085120 Medicago truncatula HOM05D002545 ORTHO05D002335 5.8e-10 70.1 114 33.3
CBR_g72775 Chara braunii HOM05D004979 ORTHO05D132771 7.1e-08 63.2 141 32.6

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (3 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (2 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (3 genes)
Lonicera japonica (2 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (2 genes)
Rhododendron simsii (3 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (3 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (6 genes)
Zea mays (1 genes)

Program Settings