Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 0.0e+00 2246.9 1134 100.0
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 0.0e+00 1706.0 1146 76.7
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 0.0e+00 1688.3 1133 75.5
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 0.0e+00 1671.4 1174 74.1
vmacro16011 Vaccinium macrocarpon HOM05D004911 ORTHO05D005930 0.0e+00 1540.0 1146 71.9
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 0.0e+00 1528.1 1136 69.5
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 0.0e+00 1483.8 1137 68.3
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 0.0e+00 1473.0 1090 71.3
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 0.0e+00 1459.1 1143 65.9
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 0.0e+00 1418.7 1147 64.8
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 0.0e+00 1407.1 1141 64.3
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 0.0e+00 1404.0 1146 64.6
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 0.0e+00 1403.3 1139 64.2
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 0.0e+00 1398.6 1149 63.9
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1397.5 1134 64.5
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 0.0e+00 1397.1 1134 64.7
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1396.7 1134 64.5
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 0.0e+00 1396.7 1135 64.6
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 0.0e+00 1395.6 1149 63.2
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 0.0e+00 1395.2 1147 63.1
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1394.8 1134 64.3
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 0.0e+00 1394.0 1132 63.5
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 0.0e+00 1390.2 1139 63.0
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 0.0e+00 1388.2 1155 63.1
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 0.0e+00 1388.2 1139 62.6
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 0.0e+00 1387.9 1144 63.4
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 0.0e+00 1387.5 1134 64.3
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1385.9 1136 63.9
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 0.0e+00 1382.5 1139 62.2
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1381.3 1134 64.0
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 0.0e+00 1380.9 1139 62.2
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1379.8 1133 63.8
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 0.0e+00 1377.8 1155 62.4
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 0.0e+00 1372.8 1137 63.1
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 0.0e+00 1372.8 1139 62.9
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 0.0e+00 1368.6 1136 62.3
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 0.0e+00 1366.3 1125 62.9
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 0.0e+00 1365.1 1133 62.9
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 0.0e+00 1358.2 1137 61.1
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 0.0e+00 1350.9 1136 61.9
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 0.0e+00 1328.9 1143 60.5
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 0.0e+00 1328.2 1142 60.9
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 0.0e+00 1326.6 1141 62.2
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 0.0e+00 1323.1 1129 61.0
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 0.0e+00 1322.0 1136 61.6
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 0.0e+00 1315.1 1155 59.8
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 0.0e+00 1314.3 1139 61.1
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 0.0e+00 1310.0 1141 61.3
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 0.0e+00 1308.1 1136 59.7
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 0.0e+00 1307.0 1140 60.9
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 0.0e+00 1304.7 1138 59.8
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 0.0e+00 1304.3 1138 60.1
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 0.0e+00 1297.3 1151 60.4
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 0.0e+00 1290.8 1135 59.4
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 0.0e+00 1289.2 1150 59.6
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 0.0e+00 1287.3 1140 59.6
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 0.0e+00 1276.5 1137 60.2
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 0.0e+00 1271.9 1146 58.6
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 0.0e+00 1267.3 1151 58.6
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 0.0e+00 1265.4 1134 59.3
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 0.0e+00 1260.7 1130 59.4
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 0.0e+00 1260.0 1129 59.5
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 0.0e+00 1256.1 1136 59.2
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 0.0e+00 1254.2 1096 60.1
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 0.0e+00 1254.2 1153 58.0
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 0.0e+00 1248.4 1131 58.5
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 0.0e+00 1248.0 1155 56.9
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 0.0e+00 1238.8 1134 58.5
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 0.0e+00 1217.6 1137 58.3
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 0.0e+00 1217.2 1137 57.9
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 0.0e+00 1215.3 1129 58.2
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 0.0e+00 1214.1 1031 61.4
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 0.0e+00 1189.9 1023 60.4
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 0.0e+00 1181.0 1148 54.1
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 0.0e+00 1179.1 1144 53.7
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 0.0e+00 1175.2 1137 54.1
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 0.0e+00 1168.3 1131 54.4
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 0.0e+00 1166.8 1140 53.5
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 0.0e+00 1164.4 1113 56.2
unitig_22.g6363 Utricularia gibba HOM05D004911 ORTHO05D005930 0.0e+00 1164.1 1145 55.5
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 0.0e+00 1156.4 1144 53.0
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 0.0e+00 1154.0 1144 52.9
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 0.0e+00 1147.5 1175 53.4
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 0.0e+00 1142.1 1140 52.5
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 0.0e+00 1139.0 1135 52.7
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 0.0e+00 1137.9 1140 52.4
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 0.0e+00 1128.6 1139 52.1
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 0.0e+00 1125.2 1139 52.0
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 2.3e-298 1029.2 1168 49.5
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 1.7e-280 969.9 1133 47.7
TPR.G32325 Trifolium pratense HOM05D004911 ORTHO05D005930 1.8e-274 949.9 906 56.4
Hma1.2p1_0183F.1_g081060 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 3.7e-272 942.2 647 73.9
Eucgr.J00848 Eucalyptus grandis HOM05D004911 ORTHO05D005930 1.0e-269 934.1 770 61.2
QL03p043438 Quercus lobata HOM05D004911 ORTHO05D005930 3.6e-267 925.6 640 71.7
CiPaw.05G166600 Carya illinoinensis HOM05D004911 ORTHO05D005930 3.0e-261 906.0 655 69.5
Os02g0829400 Oryza sativa ssp. japonica HOM05D004911 ORTHO05D005930 3.4e-257 892.5 1146 45.7
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 4.6e-254 882.1 1134 44.7
Oeu056145.2 Olea europaea HOM05D004911 ORTHO05D005930 9.3e-231 804.7 644 62.7
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 2.5e-228 796.6 1220 40.7
TAR371G0035 Trochodendron aralioides HOM05D004911 ORTHO05D005930 3.4e-225 786.2 563 70.3
AUR62017660 Chenopodium quinoa HOM05D004911 ORTHO05D005930 5.4e-223 778.9 648 63.0
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 2.4e-215 753.4 1160 40.2
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 5.8e-209 732.3 1239 37.5
Haze_11729 Corylus avellana HOM05D004911 ORTHO05D005930 4.2e-207 726.1 612 62.9
Phvul.002G058701 Phaseolus vulgaris HOM05D004911 ORTHO05D005930 2.2e-195 687.2 561 63.8
Zm00001eb259390 Zea mays HOM05D004911 ORTHO05D005930 5.0e-184 649.4 644 53.3
HPP92_012853 Vanilla planifolia HOM05D004911 ORTHO05D005930 2.6e-177 627.1 713 49.4
TAR371G0490 Trochodendron aralioides HOM05D004911 ORTHO05D005930 4.8e-171 606.3 525 62.3
Haze_11728 Corylus avellana HOM05D004911 ORTHO05D005930 2.1e-166 590.9 466 67.0
CiPaw.05G166500 Carya illinoinensis HOM05D004911 ORTHO05D005930 4.1e-154 550.1 495 60.6
QL03p043434 Quercus lobata HOM05D004911 ORTHO05D005930 1.0e-144 518.8 488 57.4
CBR_g20270 Chara braunii HOM05D004911 ORTHO05D005930 1.6e-86 325.5 1598 24.3
AagrBONN_evm.TU.Sc2ySwM_228.3553 Anthoceros agrestis HOM05D004911 ORTHO05D005930 8.5e-83 313.2 521 37.8
HPP92_012844 Vanilla planifolia HOM05D004911 ORTHO05D005930 1.4e-82 312.4 741 35.8
HPP92_012845 Vanilla planifolia HOM05D004911 ORTHO05D005930 7.7e-76 290.0 288 53.5
SHI34912 Sapria himalayana HOM05D004911 ORTHO05D005930 4.2e-74 284.3 559 34.2
AagrBONN_evm.TU.Sc2ySwM_228.3554 Anthoceros agrestis HOM05D004911 ORTHO05D005930 2.0e-71 275.4 558 33.7
SHI38855 Sapria himalayana HOM05D004911 ORTHO05D005930 2.1e-65 255.4 379 44.1
SHI47273 Sapria himalayana HOM05D004911 ORTHO05D005930 1.4e-64 252.7 484 33.5
SHI42568 Sapria himalayana HOM05D004911 ORTHO05D005930 9.7e-63 246.5 560 31.8
SHI50333 Sapria himalayana HOM05D004911 ORTHO05D005930 1.3e-51 209.5 514 31.5
SHI45395 Sapria himalayana HOM05D004911 ORTHO05D005930 1.6e-49 202.6 676 27.7
SHI45716 Sapria himalayana HOM05D004911 ORTHO05D005930 1.6e-49 202.6 676 27.7
SHI39007 Sapria himalayana HOM05D004911 ORTHO05D005930 5.4e-45 187.6 375 36.0
SHI53748 Sapria himalayana HOM05D004911 ORTHO05D005930 3.5e-44 184.9 242 42.1
SHI39005 Sapria himalayana HOM05D004911 ORTHO05D005930 3.0e-40 171.8 168 51.2
SHI34911 Sapria himalayana HOM05D004911 ORTHO05D005930 4.4e-39 167.9 265 40.4
SHI49274 Sapria himalayana HOM05D004911 ORTHO05D005930 4.9e-38 164.5 294 37.4
SHI50603 Sapria himalayana HOM05D004911 ORTHO05D005930 5.2e-32 144.4 212 41.0
SHI39004 Sapria himalayana HOM05D004911 ORTHO05D005930 7.0e-29 134.0 150 48.0
SHI42567 Sapria himalayana HOM05D004911 ORTHO05D005930 1.2e-28 133.3 148 48.0
SHI51106 Sapria himalayana HOM05D004911 ORTHO05D005930 1.2e-25 123.2 98 54.1
VMungo0251G2567 Vigna mungo HOM05D004911 ORTHO05D018492 8.0e-25 120.6 109 58.7
SHI38854 Sapria himalayana HOM05D004911 ORTHO05D005930 1.1e-24 120.2 120 50.0
SHI45052 Sapria himalayana HOM05D004911 ORTHO05D005930 3.2e-21 108.6 241 31.1
SEGI_29886 Sequoiadendron giganteum HOM05D004911 ORTHO05D005930 1.7e-19 102.8 145 44.8
Dinv29855 Davidia involucrata HOM05D004911 ORTHO05D005930 1.5e-18 99.8 53 84.9
ATR0624G005 Amborella trichopoda HOM05D004911 ORTHO05D005930 1.5e-15 89.7 115 47.8
SHI45396 Sapria himalayana HOM05D004911 ORTHO05D005930 5.8e-15 87.8 220 29.1
SHI45717 Sapria himalayana HOM05D004911 ORTHO05D005930 5.8e-15 87.8 220 29.1
EL10Ac2g03601 Beta vulgaris HOM05D004911 ORTHO05D005930 9.9e-15 87.0 58 67.2
SHI45051 Sapria himalayana HOM05D004911 ORTHO05D005930 6.4e-14 84.3 52 75.0
SHI52879 Sapria himalayana HOM05D004911 ORTHO05D005930 5.6e-10 71.2 151 35.1
Haze_13501 Corylus avellana HOM05D004911 ORTHO05D005930 2.8e-09 68.9 65 58.5
SMO343G0003 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 4.4e-07 61.6 82 36.6
SHI47080 Sapria himalayana HOM05D004911 ORTHO05D005930 1.3e-06 60.1 80 37.5

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (1 genes)
Avicennia marina (1 genes)
Beta vulgaris (2 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (3 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (24 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (3 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings