Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 5.4e-58 227.3 100 100.0
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 4.6e-57 224.2 100 99.0
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 5.2e-53 210.7 98 91.8
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 1.2e-52 209.5 98 92.9
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 2.2e-51 205.3 98 89.8
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 2.9e-51 204.9 98 89.8
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 3.7e-51 204.5 98 87.8
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 4.9e-51 204.1 98 88.8
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 6.4e-51 203.8 98 88.8
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 1.1e-50 203.0 98 88.8
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 1.4e-50 202.6 98 87.8
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 1.4e-50 202.6 98 87.8
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 1.4e-50 202.6 98 87.8
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 3.2e-50 201.4 98 87.8
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 3.2e-50 201.4 98 89.8
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 4.1e-50 201.1 98 85.7
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 7.0e-50 200.3 98 86.7
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 9.2e-50 199.9 98 88.8
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 1.2e-49 199.5 98 86.7
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 1.2e-49 199.5 98 86.7
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 1.2e-49 199.5 98 86.7
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 1.6e-49 199.1 100 86.0
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 1.6e-49 199.1 98 85.7
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 2.7e-49 198.4 98 83.7
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 2.7e-49 198.4 98 86.7
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 4.6e-49 197.6 100 84.0
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 4.6e-49 197.6 98 87.8
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 7.8e-49 196.8 98 85.7
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 3.9e-48 194.5 98 83.7
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 5.1e-48 194.1 98 83.7
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 8.6e-48 193.4 98 83.7
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 8.6e-48 193.4 98 84.7
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 8.6e-48 193.4 98 83.7
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 1.9e-47 192.2 98 87.8
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 1.9e-47 192.2 95 87.4
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 1.9e-47 192.2 98 83.7
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 2.5e-47 191.8 98 87.8
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 2.5e-47 191.8 98 87.8
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 2.5e-47 191.8 98 87.8
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 4.3e-47 191.0 98 83.7
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 5.6e-47 190.7 98 83.7
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 9.5e-47 189.9 98 86.7
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 9.5e-47 189.9 98 86.7
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 9.5e-47 189.9 98 86.7
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 9.5e-47 189.9 98 86.7
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 9.5e-47 189.9 98 86.7
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 9.5e-47 189.9 98 86.7
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 9.5e-47 189.9 98 83.7
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 9.5e-47 189.9 98 82.7
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 9.5e-47 189.9 98 81.6
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 1.2e-46 189.5 98 86.7
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 1.2e-46 189.5 98 81.6
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 1.2e-46 189.5 98 81.6
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 1.2e-46 189.5 98 81.6
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 1.2e-46 189.5 98 82.7
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 3.6e-46 188.0 98 85.7
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 1.4e-45 186.0 98 82.7
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 4.0e-45 184.5 85 92.9
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 4.0e-45 184.5 98 78.6
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 1.2e-44 183.0 98 80.6
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 1.5e-44 182.6 98 77.6
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 2.6e-44 181.8 98 80.6
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 3.4e-44 181.4 98 79.6
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 5.8e-44 180.6 98 80.6
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 7.5e-44 180.3 98 76.5
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 7.5e-44 180.3 98 76.5
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 9.9e-44 179.9 98 78.6
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 1.3e-43 179.5 98 75.5
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 1.7e-43 179.1 88 87.5
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 6.4e-43 177.2 97 76.3
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 1.1e-42 176.4 100 74.0
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 1.1e-42 176.4 98 77.6
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 1.4e-42 176.0 100 73.0
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 2.4e-42 175.3 98 78.6
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 2.4e-42 175.3 98 72.4
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 5.4e-42 174.1 98 73.5
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 7.1e-42 173.7 100 74.0
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 2.1e-41 172.2 98 72.4
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 2.3e-40 168.7 98 71.4
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 6.6e-40 167.2 98 73.5
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 6.6e-40 167.2 98 73.5
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 8.6e-40 166.8 132 59.1
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 3.3e-39 164.9 98 75.5
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 3.3e-39 164.9 98 75.5
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 1.4e-37 159.5 99 68.7
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 5.2e-37 157.5 86 82.6
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 3.4e-36 154.8 98 66.3
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 5.8e-36 154.1 98 65.3
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 4.9e-35 151.0 99 67.7
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 6.4e-35 150.6 168 47.6
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 7.1e-34 147.1 99 63.6
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 1.9e-31 139.0 109 56.9
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 1.3e-30 136.3 71 81.7
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 6.4e-27 124.0 99 57.6
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 1.0e-24 116.7 99 54.5
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 6.2e-22 107.5 58 81.0
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 2.4e-21 105.5 100 53.0
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 1.2e-17 93.2 98 40.8
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 1.2e-12 76.6 41 80.5
Nn2g15280 Nelumbo nucifera HOM05D007373 ORTHO05D009192 2.0e-12 75.9 38 78.9
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 4.9e-11 71.2 30 96.7
Os03g0578200 Oryza sativa ssp. japonica HOM05D007373 ORTHO05D009192 5.5e-10 67.8 76 40.8
Zm00001eb212440 Zea mays HOM05D007373 ORTHO05D009192 1.6e-09 66.2 76 38.2
Zm00001eb061850 Zea mays HOM05D007373 ORTHO05D009192 2.3e-08 62.4 76 38.2

Acer truncatum (2 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (2 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (2 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings