Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019139 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 4.0e-116 421.4 207 100.0
CSS0029859 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 1.6e-109 399.4 207 94.7
CSS0002000 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 6.2e-109 397.5 207 94.2
vmacro06962 Vaccinium macrocarpon HOM05D005616 ORTHO05D006975 1.2e-99 366.7 207 85.5
Dinv10614 Davidia involucrata HOM05D005616 ORTHO05D006975 7.9e-96 354.0 207 80.2
Lj8A66T51 Lonicera japonica HOM05D005616 ORTHO05D006975 3.9e-95 351.7 207 80.7
Haze_17234 Corylus avellana HOM05D005616 ORTHO05D006975 3.3e-94 348.6 207 80.2
Cfa001309 Carpinus fangiana HOM05D005616 ORTHO05D006975 6.3e-93 344.4 207 79.2
GSVIVG01032805001 Vitis vinifera HOM05D005616 ORTHO05D006975 6.3e-93 344.4 207 79.7
Thecc.10G015200 Theobroma cacao HOM05D005616 ORTHO05D006975 1.4e-92 343.2 207 78.3
Ciclev10032361m.g Citrus clementina HOM05D005616 ORTHO05D006975 3.4e-91 338.6 207 75.4
Nitab4.5_0005018g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 2.2e-90 335.9 204 77.9
FAN07G0068 Fragaria x ananassa HOM05D005616 ORTHO05D006975 6.5e-90 334.3 207 77.3
Manes.10G011400 Manihot esculenta HOM05D005616 ORTHO05D006975 8.5e-90 334.0 207 75.8
TAR623G1070 Trochodendron aralioides HOM05D005616 ORTHO05D006975 1.1e-89 333.6 207 76.3
Prupe.2G251100 Prunus persica HOM05D005616 ORTHO05D006975 1.4e-89 333.2 207 76.3
FAN03G0254 Fragaria x ananassa HOM05D005616 ORTHO05D006975 5.5e-89 331.3 207 76.8
RcHm_v2.0_Chr1g0370411 Rosa chinensis HOM05D005616 ORTHO05D006975 5.5e-89 331.3 207 76.3
MSTRG.8961 Avicennia marina HOM05D005616 ORTHO05D006975 9.3e-89 330.5 207 74.9
HanXRQChr08g0222401 Helianthus annuus HOM05D005616 ORTHO05D006975 2.1e-88 329.3 207 74.4
SalBow6G5046 Salvia bowleyana HOM05D005616 ORTHO05D006975 2.1e-88 329.3 207 76.8
FAN01G0309 Fragaria x ananassa HOM05D001932 ORTHO05D006975 4.6e-88 328.2 207 75.8
Nitab4.5_0003454g0010 Nicotiana tabacum HOM05D005616 ORTHO05D006975 4.6e-88 328.2 204 76.5
Gohir.A10G237500 Gossypium hirsutum HOM05D005616 ORTHO05D006975 6.1e-88 327.8 207 75.4
Cc02_g06410 Coffea canephora HOM05D005616 ORTHO05D006975 7.9e-88 327.4 203 76.8
Migut.F00691 Erythranthe guttata HOM05D005616 ORTHO05D006975 7.9e-88 327.4 207 74.9
Lalb_Chr08g0231681 Lupinus albus HOM05D005616 ORTHO05D006975 7.9e-88 327.4 207 73.9
Lj1g0010131 Lotus japonicus HOM05D005616 ORTHO05D006975 1.0e-87 327.0 207 73.4
ECA233G4091 Erigeron canadensis HOM05D005616 ORTHO05D006975 1.3e-87 326.6 207 74.9
DCAR_023439 Daucus carota HOM05D005616 ORTHO05D006975 2.3e-87 325.9 206 74.8
arahy.Tifrunner.gnm1.ann1.061K9L Arachis hypogaea HOM05D005616 ORTHO05D006975 3.9e-87 325.1 205 74.1
Lsat_1_v5_gn_8_11701 Lactuca sativa HOM05D005616 ORTHO05D006975 3.9e-87 325.1 207 74.4
Ca_15132_v3 Cicer arietinum L. HOM05D005616 ORTHO05D006975 5.1e-87 324.7 207 72.9
Eucgr.J00201 Eucalyptus grandis HOM05D005616 ORTHO05D006975 5.1e-87 324.7 207 74.9
FAN10G3671 Fragaria x ananassa HOM05D005616 ORTHO05D006975 5.1e-87 324.7 207 75.8
Medtr3g070890 Medicago truncatula HOM05D005616 ORTHO05D006975 5.1e-87 324.7 207 73.9
Medtr3g449480 Medicago truncatula HOM05D005616 ORTHO05D006975 5.1e-87 324.7 207 74.4
VMungo1383G1171 Vigna mungo HOM05D005616 ORTHO05D006975 5.1e-87 324.7 203 74.9
arahy.Tifrunner.gnm1.ann1.R92L2M Arachis hypogaea HOM05D005616 ORTHO05D006975 6.7e-87 324.3 204 74.5
FvH4_4g21980 Fragaria vesca HOM05D005616 ORTHO05D006975 6.7e-87 324.3 207 75.4
Lj6g0010776 Lotus japonicus HOM05D005616 ORTHO05D006975 6.7e-87 324.3 207 72.9
TPR.G11210 Trifolium pratense HOM05D005616 ORTHO05D006975 8.8e-87 323.9 207 73.4
Glyma.18G026400 Glycine max HOM05D005616 ORTHO05D006975 1.1e-86 323.6 207 73.4
Solyc02g076760.3 Solanum lycopersicum HOM05D005616 ORTHO05D006975 1.5e-86 323.2 204 75.0
FvH4_7g24571 Fragaria vesca HOM05D005616 ORTHO05D006975 1.9e-86 322.8 207 75.8
FAN06G2993 Fragaria x ananassa HOM05D001932 ORTHO05D006975 1.9e-86 322.8 207 75.8
FAN12G0831 Fragaria x ananassa HOM05D005616 ORTHO05D006975 1.9e-86 322.8 207 74.9
SGA_v2.0_scaffold60G21012 Striga asiatica HOM05D005616 ORTHO05D006975 1.9e-86 322.8 207 73.9
TWI09G1208 Tripterygium wilfordii HOM05D005616 ORTHO05D006975 1.9e-86 322.8 207 72.5
Peaxi162Scf00284g01041 Petunia axillaris HOM05D005616 ORTHO05D006975 2.5e-86 322.4 204 75.0
Sopen06g017380 Solanum pennellii HOM05D005616 ORTHO05D006975 2.5e-86 322.4 205 75.1
PGSC0003DMG400010237 Solanum tuberosum HOM05D005616 ORTHO05D006975 2.5e-86 322.4 204 75.5
PGSC0003DMG401008474 Solanum tuberosum HOM05D005616 ORTHO05D006975 2.5e-86 322.4 205 75.1
Glyma.11G230900 Glycine max HOM05D005616 ORTHO05D006975 3.3e-86 322.0 207 72.5
Peaxi162Scf00801g00729 Petunia axillaris HOM05D005616 ORTHO05D006975 3.3e-86 322.0 204 76.0
Gohir.A04G093400 Gossypium hirsutum HOM05D005616 ORTHO05D006975 4.3e-86 321.6 207 73.9
Phvul.001G244100 Phaseolus vulgaris HOM05D005616 ORTHO05D006975 4.3e-86 321.6 203 74.4
Duzib128G0549 Durio zibethinus HOM05D005616 ORTHO05D006975 5.7e-86 321.2 207 73.9
EL10Ac1g02124 Beta vulgaris HOM05D005616 ORTHO05D006975 7.4e-86 320.9 207 72.9
Gorai.012G116600 Gossypium raimondii HOM05D005616 ORTHO05D006975 9.7e-86 320.5 203 73.9
PSO384G3782 Papaver somniferum HOM05D005616 ORTHO05D006975 9.7e-86 320.5 207 72.9
Oeu004695.1 Olea europaea HOM05D005616 ORTHO05D006975 1.3e-85 320.1 207 72.9
MD07G1223000 Malus domestica HOM05D005616 ORTHO05D006975 1.7e-85 319.7 207 74.4
PSO339G0515 Papaver somniferum HOM05D005616 ORTHO05D006975 1.7e-85 319.7 207 72.9
Solyc06g051410.4 Solanum lycopersicum HOM05D005616 ORTHO05D006975 2.2e-85 319.3 205 74.6
Sopen02g021670 Solanum pennellii HOM05D005616 ORTHO05D006975 3.7e-85 318.5 204 73.5
Psat5g129880 Pisum sativum HOM05D005616 ORTHO05D006975 4.8e-85 318.2 207 72.9
THA.LOC104816542 Tarenaya hassleriana HOM05D005616 ORTHO05D006975 8.2e-85 317.4 207 72.5
AUR62012260 Chenopodium quinoa HOM05D005616 ORTHO05D006975 1.4e-84 316.6 207 72.5
SGA_v2.0_scaffold105G30487 Striga asiatica HOM05D005616 ORTHO05D006975 1.8e-84 316.2 200 74.5
Potri.008G069500 Populus trichocarpa HOM05D005616 ORTHO05D006975 2.4e-84 315.8 207 73.4
Aa31LG11G6640 Aethionema arabicum HOM05D005616 ORTHO05D006975 3.1e-84 315.5 207 72.9
Potri.012G145600 Populus trichocarpa HOM05D005616 ORTHO05D006975 4.1e-84 315.1 207 72.9
PSO017G0320 Papaver somniferum HOM05D005616 ORTHO05D006975 5.3e-84 314.7 206 71.4
MELO3C026789.2 Cucumis melo HOM05D005616 ORTHO05D006975 1.2e-83 313.5 207 72.0
PGR044G0338 Punica granatum HOM05D005616 ORTHO05D006975 1.2e-83 313.5 205 73.7
Sc10g0002410 Simmondsia chinensis HOM05D005616 ORTHO05D006975 2.6e-83 312.4 207 69.6
CARHR034480 Cardamine hirsuta HOM05D005616 ORTHO05D006975 1.7e-82 309.7 207 72.9
ClCG07G004280 Citrullus lanatus HOM05D005616 ORTHO05D006975 1.7e-82 309.7 207 71.0
Sed0025730 Sechium edule HOM05D005616 ORTHO05D006975 1.7e-82 309.7 207 69.6
PSO675G8834 Papaver somniferum HOM05D005616 ORTHO05D006975 2.2e-82 309.3 206 70.9
Aqoxy4G02536 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 3.8e-82 308.5 207 70.0
CsaV3_5G010220 Cucumis sativus L. HOM05D005616 ORTHO05D006975 3.8e-82 308.5 207 70.5
BcaB05g21698 Brassica carinata HOM05D005616 ORTHO05D006975 6.5e-82 307.8 207 73.4
AUR62022893 Chenopodium quinoa HOM05D005616 ORTHO05D006975 8.5e-82 307.4 207 71.0
AT1G07780 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 1.1e-81 307.0 207 71.0
AL6G15480 Arabidopsis lyrata HOM05D005616 ORTHO05D006975 1.4e-81 306.6 207 71.5
AT5G05590 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 1.4e-81 306.6 207 71.0
Thhalv10014368m.g Eutrema salsugineum HOM05D005616 ORTHO05D006975 1.4e-81 306.6 207 72.9
Carub.0006s0449 Capsella rubella HOM05D005616 ORTHO05D006975 1.9e-81 306.2 207 72.0
Nitab4.5_0010803g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 9.4e-81 303.9 204 73.0
Sp6g37270 Schrenkiella parvula HOM05D005616 ORTHO05D006975 9.4e-81 303.9 207 71.5
MBI19_g36756_MAGBIO Magnolia biondii HOM05D005616 ORTHO05D006975 2.1e-80 302.8 202 69.8
BcaB05g21694 Brassica carinata HOM05D005616 ORTHO05D006975 2.7e-80 302.4 207 72.9
CANSAT78G1638 Cannabis sativa HOM05D005616 ORTHO05D006975 2.7e-80 302.4 206 69.4
Hund13869 Selenicereus undatus HOM05D005616 ORTHO05D006975 4.7e-80 301.6 207 69.1
Sabra08G0051100 Salix brachista HOM05D005616 ORTHO05D006975 6.1e-80 301.2 207 70.5
COL.COLO4_25743 Corchorus olitorius HOM05D005616 ORTHO05D006975 7.9e-80 300.8 180 76.7
BraA02t04856Z Brassica rapa HOM05D005616 ORTHO05D006975 1.0e-79 300.4 207 72.0
BolC2t06207H Brassica oleracea HOM05D005616 ORTHO05D006975 1.5e-78 296.6 207 71.5
Gohir.D10G249200 Gossypium hirsutum HOM05D005616 ORTHO05D006975 3.7e-77 292.0 207 68.6
Gorai.011G289500 Gossypium raimondii HOM05D005616 ORTHO05D006975 8.2e-77 290.8 207 68.1
CiPaw.02G193000 Carya illinoinensis HOM05D005616 ORTHO05D006975 3.1e-76 288.9 176 75.0
HPP92_011508 Vanilla planifolia HOM05D005616 ORTHO05D006975 5.3e-76 288.1 204 67.2
Aqoxy5G03614 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 2.0e-75 286.2 196 68.4
Gohir.D04G132700 Gossypium hirsutum HOM05D005616 ORTHO05D006975 2.6e-75 285.8 176 73.9
SHI03421 Sapria himalayana HOM05D005616 ORTHO05D006975 3.8e-74 282.0 207 64.3
Os02g0266000 Oryza sativa ssp. japonica HOM05D005616 ORTHO05D006975 1.4e-71 273.5 204 63.7
ATR0730G169 Amborella trichopoda HOM05D005616 ORTHO05D006975 1.1e-70 270.4 207 62.8
AUR62028615 Chenopodium quinoa HOM05D005616 ORTHO05D006975 2.6e-70 269.2 216 63.9
Zm00001eb203980 Zea mays HOM05D005616 ORTHO05D006975 8.2e-69 264.2 206 62.1
unitig_0.g2023 Utricularia gibba HOM05D005616 ORTHO05D006975 2.6e-67 259.2 176 68.8
Zm00001eb281510 Zea mays HOM05D005616 ORTHO05D006975 2.6e-67 259.2 205 60.5
SEGI_33372 Sequoiadendron giganteum HOM05D005616 ORTHO05D006975 2.0e-62 243.0 202 57.4
TAR369G1110 Trochodendron aralioides HOM05D005616 ORTHO05D006975 7.0e-60 234.6 144 77.1
Aqoxy332s005 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 1.6e-59 233.4 182 64.3
Dinv21739 Davidia involucrata HOM05D005616 ORTHO05D006975 1.8e-55 219.9 130 79.2
AagrBONN_evm.TU.Sc2ySwM_228.1039 Anthoceros agrestis HOM05D005616 ORTHO05D006975 3.0e-55 219.2 207 50.7
Pp3c17_23550 Physcomitrium patens HOM05D005616 ORTHO05D006975 6.8e-55 218.0 206 52.4
Mapoly0041s0067 Marchantia polymorpha HOM05D005616 ORTHO05D006975 1.2e-54 217.2 203 52.2
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 4.8e-53 211.8 183 56.8
CAN.G370.83 Capsicum annuum HOM05D002257 ORTHO05D006975 4.5e-51 205.3 133 76.7
SMO364G0619 Selaginella moellendorffii HOM05D005616 ORTHO05D006975 1.9e-49 199.9 208 50.5
Cre12.g519000 Chlamydomonas reinhardtii HOM05D005616 ORTHO05D006975 4.2e-49 198.7 214 44.9
AT1G29410 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 8.9e-47 191.0 141 68.8
C02p02440 Brassica napus HOM05D005616 ORTHO05D006975 1.5e-46 190.3 131 74.0
MCO02G328 Micromonas commoda HOM05D005616 ORTHO05D006975 8.6e-42 174.5 230 36.5
CiPaw.01G059100 Carya illinoinensis HOM05D005616 ORTHO05D006975 1.0e-39 167.5 109 73.4
PRCOL_00006470 Prasinoderma coloniale HOM05D005616 ORTHO05D006975 1.5e-38 163.7 209 40.7
Potri.014G188400 Populus trichocarpa HOM05D005616 ORTHO05D006975 1.8e-31 140.2 130 57.7
DCAR_029632 Daucus carota HOM05D000090 ORTHO05D001584 3.0e-26 122.9 91 62.6
Nn2g13147 Nelumbo nucifera HOM05D005616 ORTHO05D006975 5.1e-26 122.1 78 74.4
FAN17G0984 Fragaria x ananassa HOM05D002859 ORTHO05D003120 4.3e-25 119.0 71 81.7
MSTRG.13829 Avicennia marina HOM05D005616 ORTHO05D006975 1.6e-24 117.1 88 67.0
CBR_g37169 Chara braunii HOM05D005616 ORTHO05D006975 1.6e-19 100.5 108 44.4
Dinv21738 Davidia involucrata HOM05D005616 ORTHO05D006975 5.8e-14 82.0 54 75.9
Atru.chr7.2145 Acer truncatum HOM05D005616 ORTHO05D006975 1.1e-09 67.8 44 70.5
Cfa025268 Carpinus fangiana HOM05D003366 ORTHO05D004562 3.3e-09 66.2 244 28.3
Atru.chr12.48 Acer truncatum HOM05D005616 ORTHO05D006975 1.6e-08 63.9 39 74.4
SGA_v2.0_scaffold250G44984 Striga asiatica HOM05D005616 ORTHO05D401959 9.9e-06 54.7 60 50.0

Acer truncatum (2 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (3 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (3 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (1 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (3 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (7 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (3 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (4 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (3 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings