Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 4.9e-163 577.8 302 100.0
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 6.1e-97 358.2 329 68.1
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 6.8e-80 301.6 319 59.9
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 2.0e-76 290.0 342 57.0
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 2.3e-75 286.6 319 58.6
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 5.6e-74 282.0 276 61.6
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 7.3e-74 281.6 323 55.7
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 3.6e-73 279.3 306 56.9
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 6.2e-73 278.5 331 54.4
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 1.5e-71 273.9 280 59.6
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 2.9e-70 269.6 324 55.6
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 3.7e-70 269.2 307 56.4
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 3.7e-70 269.2 307 56.4
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 4.9e-70 268.9 322 54.0
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 2.4e-69 266.5 356 51.4
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 3.2e-69 266.2 326 53.7
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 2.0e-68 263.5 318 53.8
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 4.6e-68 262.3 322 52.5
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 1.0e-67 261.2 323 53.9
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 1.3e-67 260.8 322 52.5
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 3.0e-67 259.6 322 52.2
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 2.5e-66 256.5 317 53.6
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 2.5e-66 256.5 294 53.1
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 5.6e-66 255.4 309 54.7
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 7.3e-66 255.0 306 51.6
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 9.5e-66 254.6 310 54.5
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 1.6e-65 253.8 322 52.5
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 1.6e-65 253.8 322 54.3
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 2.8e-65 253.1 321 53.9
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 8.1e-65 251.5 308 54.2
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 4.0e-64 249.2 322 53.4
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 1.2e-63 247.7 311 53.7
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 1.5e-63 247.3 309 53.7
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 1.5e-63 247.3 331 52.0
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 2.0e-63 246.9 321 52.0
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 5.8e-63 245.4 303 51.2
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 7.5e-63 245.0 305 53.4
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 7.5e-63 245.0 320 51.9
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 1.3e-62 244.2 253 59.7
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 1.7e-62 243.8 331 51.4
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 2.2e-62 243.4 312 52.6
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 3.7e-62 242.7 319 51.7
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 4.9e-62 242.3 310 51.9
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 8.3e-62 241.5 320 52.2
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 2.4e-61 240.0 320 51.9
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 7.1e-61 238.4 266 55.6
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 9.2e-61 238.0 320 50.0
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 1.2e-60 237.7 300 52.7
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 1.6e-60 237.3 321 51.4
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 2.1e-60 236.9 323 50.8
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 2.7e-60 236.5 320 49.4
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 3.5e-60 236.1 320 51.2
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.0e-59 234.6 263 55.1
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 1.3e-59 234.2 267 55.1
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 2.3e-59 233.4 301 50.8
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 2.3e-59 233.4 302 51.7
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 3.0e-59 233.0 240 59.2
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 3.0e-59 233.0 267 54.3
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 3.0e-59 233.0 313 50.2
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 3.9e-59 232.6 311 49.5
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 3.9e-59 232.6 256 55.9
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 5.1e-59 232.3 257 56.4
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 8.6e-59 231.5 354 46.9
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 8.6e-59 231.5 271 53.5
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.5e-58 230.7 354 46.9
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 4.3e-58 229.2 321 50.2
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 9.5e-58 228.0 319 48.3
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 9.5e-58 228.0 308 48.4
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 9.5e-58 228.0 257 55.3
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 1.2e-57 227.6 255 54.5
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 1.6e-57 227.3 325 49.5
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 1.6e-57 227.3 308 50.3
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 2.1e-57 226.9 322 50.0
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 2.8e-57 226.5 243 54.3
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 4.7e-57 225.7 306 47.1
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 1.1e-56 224.6 322 50.6
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 1.5e-55 220.7 321 45.2
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 2.0e-55 220.3 327 48.3
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 2.0e-55 220.3 327 48.3
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 3.4e-55 219.5 257 54.5
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 4.4e-55 219.2 305 48.5
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 5.8e-55 218.8 277 53.4
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 7.6e-55 218.4 308 48.4
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 2.2e-54 216.9 328 46.6
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 2.9e-54 216.5 329 46.5
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 6.4e-54 215.3 315 47.0
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 6.4e-54 215.3 315 47.0
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 3.2e-53 213.0 308 47.1
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 5.4e-53 212.2 308 47.4
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 7.1e-53 211.8 347 45.5
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 7.1e-53 211.8 331 46.8
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 1.2e-52 211.1 241 53.5
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 4.6e-52 209.1 309 47.6
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 4.6e-52 209.1 322 46.0
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 7.8e-52 208.4 301 46.5
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 1.7e-51 207.2 322 45.7
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 5.1e-51 205.7 328 45.7
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 1.1e-50 204.5 262 50.0
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 1.1e-50 204.5 191 60.2
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.1e-50 204.5 255 52.5
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 1.5e-50 204.1 264 51.1
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 4.3e-50 202.6 254 52.0
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 5.6e-50 202.2 304 45.4
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 7.3e-50 201.8 338 44.1
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 9.6e-50 201.4 259 48.3
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 1.2e-49 201.1 237 51.5
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 3.6e-49 199.5 241 50.6
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 3.6e-49 199.5 342 43.9
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 4.7e-49 199.1 307 45.6
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 1.4e-48 197.6 249 49.4
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 3.1e-48 196.4 302 44.0
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 1.7e-46 190.7 258 47.3
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 5.4e-45 185.7 254 48.4
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 9.3e-45 184.9 230 48.3
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 9.3e-45 184.9 315 41.9
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 2.7e-44 183.3 219 55.3
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 3.0e-43 179.9 230 47.8
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 6.4e-38 162.2 320 40.9
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 1.7e-35 154.1 172 55.2
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 3.9e-35 152.9 187 51.3
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 8.7e-35 151.8 192 46.9
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 1.1e-34 151.4 187 50.8
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 1.9e-34 150.6 327 37.6
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 9.0e-32 141.7 340 35.0
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 2.0e-31 140.6 196 46.4
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 7.6e-31 138.7 314 34.4
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 1.9e-29 134.0 190 50.5
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 4.2e-29 132.9 307 36.5
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 9.3e-29 131.7 354 33.9
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 1.3e-25 121.3 163 50.9
CSS0009254 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 6.0e-20 102.4 158 45.6
CSS0049387 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 4.8e-17 92.8 157 42.7
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 4.8e-17 92.8 127 52.8
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 1.8e-16 90.9 76 67.1
CSS0045496 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 6.9e-16 89.0 149 43.6
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 4.5e-15 86.3 207 32.9
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 1.9e-13 80.9 155 43.9
CSS0012251 Camellia sinensis var. sinensis HOM05D000224 ORTHO05D006043 5.5e-13 79.3 141 43.3
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 6.9e-08 62.4 125 37.6
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 1.5e-07 61.2 85 45.9

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (8 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (3 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (4 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (5 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings