Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018454 Camellia sinensis var. sinensis HOM05D004725 ORTHO05D005683 4.0e-128 461.5 237 100.0
CSS0037380 Camellia sinensis var. sinensis HOM05D004725 ORTHO05D005683 2.5e-98 362.5 221 87.8
Actinidia31555 Actinidia chinensis HOM05D004725 ORTHO05D005683 7.4e-74 281.2 226 68.1
Dinv15152 Davidia involucrata HOM05D004725 ORTHO05D005683 8.2e-73 277.7 191 77.0
Lsat_1_v5_gn_8_139661 Lactuca sativa HOM05D004725 ORTHO05D005683 3.1e-72 275.8 229 65.5
Oeu038772.1 Olea europaea HOM05D004725 ORTHO05D005683 3.5e-71 272.3 220 66.8
Lj3A833G37 Lonicera japonica HOM05D004725 ORTHO05D005683 5.0e-70 268.5 224 65.6
MSTRG.3853 Avicennia marina HOM05D004725 ORTHO05D005683 8.5e-70 267.7 220 65.0
Oeu001165.1 Olea europaea HOM05D004725 ORTHO05D005683 8.5e-70 267.7 244 60.2
Cc00_g03440 Coffea canephora HOM05D004725 ORTHO05D005683 1.5e-69 266.9 223 64.1
Migut.G00073 Erythranthe guttata HOM05D004725 ORTHO05D005683 1.9e-69 266.5 220 65.5
ECA236G4776 Erigeron canadensis HOM05D004725 ORTHO05D005683 5.5e-69 265.0 221 64.7
DCAR_030461 Daucus carota HOM05D004725 ORTHO05D005683 6.1e-68 261.5 226 65.0
PGSC0003DMG400007347 Solanum tuberosum HOM05D004725 ORTHO05D005683 8.0e-68 261.2 223 63.7
Solyc11g065900.2 Solanum lycopersicum HOM05D004725 ORTHO05D005683 2.3e-67 259.6 223 63.7
Sopen11g025640 Solanum pennellii HOM05D004725 ORTHO05D005683 2.3e-67 259.6 223 63.7
SGA_v2.0_scaffold157G37322 Striga asiatica HOM05D004725 ORTHO05D005683 2.3e-67 259.6 220 62.7
Nn3g21748 Nelumbo nucifera HOM05D004725 ORTHO05D005683 3.0e-67 259.2 222 62.6
SalBow8G1743 Salvia bowleyana HOM05D004725 ORTHO05D005683 3.0e-67 259.2 220 63.2
Peaxi162Scf00057g02232 Petunia axillaris HOM05D004725 ORTHO05D005683 3.4e-66 255.8 231 61.0
Nitab4.5_0000160g0190 Nicotiana tabacum HOM05D004725 ORTHO05D005683 4.4e-66 255.4 231 61.9
GSVIVG01034975001 Vitis vinifera HOM05D004725 ORTHO05D005683 9.7e-66 254.2 221 63.8
TAR376G0735 Trochodendron aralioides HOM05D004725 ORTHO05D005683 3.1e-64 249.2 222 61.7
TPR.G27119 Trifolium pratense HOM05D004725 ORTHO05D005683 5.3e-64 248.4 227 60.8
Phvul.010G140100 Phaseolus vulgaris HOM05D004725 ORTHO05D005683 2.0e-63 246.5 225 60.4
vmacro08028 Vaccinium macrocarpon HOM05D004725 ORTHO05D005683 1.0e-62 244.2 234 60.3
HanXRQChr17g0554971 Helianthus annuus HOM05D004725 ORTHO05D005683 3.8e-62 242.3 215 61.4
HanXRQChr10g0291591 Helianthus annuus HOM05D004725 ORTHO05D005683 6.5e-62 241.5 215 60.9
unitig_37.g12782 Utricularia gibba HOM05D004725 ORTHO05D005683 6.5e-62 241.5 220 59.5
VMungo0331G0107 Vigna mungo HOM05D004725 ORTHO05D005683 1.1e-61 240.7 225 59.1
Lj3g0003769 Lotus japonicus HOM05D004725 ORTHO05D005683 1.9e-61 240.0 227 58.1
CANSAT35G1772 Cannabis sativa HOM05D004725 ORTHO05D005683 9.4e-61 237.7 234 56.4
CiPaw.02G073900 Carya illinoinensis HOM05D004725 ORTHO05D005683 1.6e-60 236.9 207 60.4
Aqoxy6G02121 Aquilegia oxysepala HOM05D004725 ORTHO05D005683 6.1e-60 235.0 205 62.0
Glyma.08G194400 Glycine max HOM05D004725 ORTHO05D005683 1.0e-59 234.2 223 58.7
Psat1g138600 Pisum sativum HOM05D004725 ORTHO05D005683 4.0e-59 232.3 213 58.2
arahy.Tifrunner.gnm1.ann1.ASV3U0 Arachis hypogaea HOM05D004725 ORTHO05D005683 8.8e-59 231.1 269 51.3
Nitab4.5_0002789g0040 Nicotiana tabacum HOM05D004725 ORTHO05D005683 2.0e-58 229.9 217 59.9
QL06p012630 Quercus lobata HOM05D004725 ORTHO05D005683 5.7e-58 228.4 188 63.3
Medtr2g044210 Medicago truncatula HOM05D004725 ORTHO05D005683 7.5e-58 228.0 190 64.2
Glyma.07G011200 Glycine max HOM05D004725 ORTHO05D005683 1.3e-57 227.3 206 60.2
MBI18_g03518_MAGBIO Magnolia biondii HOM05D004725 ORTHO05D005683 2.2e-57 226.5 219 59.4
RcHm_v2.0_Chr4g0425721 Rosa chinensis HOM05D004725 ORTHO05D005683 2.8e-57 226.1 231 54.1
Sc25g0003230 Simmondsia chinensis HOM05D004725 ORTHO05D005683 2.8e-57 226.1 220 55.9
Potri.008G103800 Populus trichocarpa HOM05D004725 ORTHO05D005683 4.8e-57 225.3 213 57.3
CDE02G0725 Ceratophyllum demersum HOM05D004725 ORTHO05D005683 6.3e-57 224.9 221 57.9
FvH4_4g13700 Fragaria vesca HOM05D004725 ORTHO05D005683 1.8e-56 223.4 229 54.6
Ciclev10005849m.g Citrus clementina HOM05D004725 ORTHO05D005683 3.1e-56 222.6 190 61.1
PSO782G1146 Papaver somniferum HOM05D004725 ORTHO05D005683 7.0e-56 221.5 221 57.5
Sabra08G0078400 Salix brachista HOM05D004725 ORTHO05D005683 9.1e-56 221.1 213 54.9
THA.LOC104827096 Tarenaya hassleriana HOM05D004725 ORTHO05D005683 9.1e-56 221.1 211 57.3
Eucgr.D00314 Eucalyptus grandis HOM05D004725 ORTHO05D005683 1.6e-55 220.3 229 53.3
Rhsim04G0240300 Rhododendron simsii HOM05D004725 ORTHO05D005683 1.6e-55 220.3 278 50.4
Carub.0008s0882 Capsella rubella HOM05D004725 ORTHO05D005683 2.0e-55 219.9 221 54.3
Carub.0008s0897 Capsella rubella HOM05D004725 ORTHO05D005683 2.0e-55 219.9 221 54.8
Manes.03G206000 Manihot esculenta HOM05D004725 ORTHO05D005683 2.0e-55 219.9 213 56.8
FAN07G1636 Fragaria x ananassa HOM05D004725 ORTHO05D005683 5.9e-55 218.4 231 53.2
Rhsim05G0134600 Rhododendron simsii HOM05D004725 ORTHO05D005683 7.7e-55 218.0 310 45.5
Sed0009995 Sechium edule HOM05D004725 ORTHO05D005683 7.7e-55 218.0 219 54.8
ClCG05G001400 Citrullus lanatus HOM05D004725 ORTHO05D005683 1.0e-54 217.6 224 53.6
CsaV3_3G008790 Cucumis sativus L. HOM05D004725 ORTHO05D005683 1.0e-54 217.6 224 53.6
AL8G22680 Arabidopsis lyrata HOM05D004725 ORTHO05D005683 2.9e-54 216.1 219 53.9
Gorai.011G201500 Gossypium raimondii HOM05D004725 ORTHO05D005683 1.1e-53 214.2 231 53.2
AT5G49010 Arabidopsis thaliana HOM05D004725 ORTHO05D005683 1.5e-53 213.8 219 53.4
BolC7t44486H Brassica oleracea HOM05D004725 ORTHO05D005683 1.9e-53 213.4 221 54.8
Thecc.04G302700 Theobroma cacao HOM05D004725 ORTHO05D005683 1.9e-53 213.4 230 53.0
Gohir.A10G173400 Gossypium hirsutum HOM05D004725 ORTHO05D005683 2.5e-53 213.0 230 51.7
Os05g0143400 Oryza sativa ssp. japonica HOM05D004725 ORTHO05D005683 2.5e-53 213.0 201 58.2
PSO063G5877 Papaver somniferum HOM05D004725 ORTHO05D005683 2.5e-53 213.0 221 55.7
Gohir.D10G179900 Gossypium hirsutum HOM05D004725 ORTHO05D005683 3.3e-53 212.6 230 53.0
Thhalv10004892m.g Eutrema salsugineum HOM05D004725 ORTHO05D005683 5.5e-53 211.8 221 53.8
SalBow6G0528 Salvia bowleyana HOM05D004725 ORTHO05D005683 7.2e-53 211.5 220 55.0
PSO384G4206 Papaver somniferum HOM05D004725 ORTHO05D005683 9.5e-53 211.1 221 55.2
Aa31LG11G8130 Aethionema arabicum HOM05D004725 ORTHO05D005683 1.2e-52 210.7 221 53.8
C07p39630 Brassica napus HOM05D004725 ORTHO05D005683 2.8e-52 209.5 221 53.8
CARHR056790 Cardamine hirsuta HOM05D004725 ORTHO05D005683 2.8e-52 209.5 212 55.2
COL.COLO4_09634 Corchorus olitorius HOM05D004725 ORTHO05D005683 2.8e-52 209.5 229 52.8
Sp2g19380 Schrenkiella parvula HOM05D004725 ORTHO05D005683 4.7e-52 208.8 221 53.4
Ca_09654_v3 Cicer arietinum L. HOM05D004725 ORTHO05D005683 6.1e-52 208.4 199 59.8
COL.COLO4_34597 Corchorus olitorius HOM05D004725 ORTHO05D005683 1.0e-51 207.6 190 60.5
Duzib212G0103 Durio zibethinus HOM05D004725 ORTHO05D005683 1.0e-51 207.6 230 52.2
Zm00001eb108600 Zea mays HOM05D004725 ORTHO05D005683 1.4e-51 207.2 202 55.4
A06p38630 Brassica napus HOM05D004725 ORTHO05D005683 1.8e-51 206.8 221 53.8
BraA06t26778Z Brassica rapa HOM05D004725 ORTHO05D005683 1.8e-51 206.8 221 53.8
Prupe.1G115500 Prunus persica HOM05D004725 ORTHO05D005683 2.3e-51 206.5 190 61.1
AL8G22360 Arabidopsis lyrata HOM05D004725 ORTHO05D005683 8.9e-51 204.5 236 50.0
ATR0691G022 Amborella trichopoda HOM05D004725 ORTHO05D005683 9.8e-50 201.1 189 59.8
Dinv44275 Davidia involucrata HOM05D004725 ORTHO05D005683 1.7e-49 200.3 161 69.6
SEGI_00745 Sequoiadendron giganteum HOM05D004725 ORTHO05D005683 1.7e-49 200.3 207 50.7
MELO3C006096.2 Cucumis melo HOM05D004725 ORTHO05D005683 2.8e-49 199.5 240 48.3
FAN12G0808 Fragaria x ananassa HOM05D004725 ORTHO05D005683 4.9e-49 198.7 229 50.7
CAN.G598.3 Capsicum annuum HOM05D004725 ORTHO05D005683 8.3e-49 198.0 165 66.1
arahy.Tifrunner.gnm1.ann1.NMZ4WG Arachis hypogaea HOM05D004725 ORTHO05D005683 3.2e-48 196.1 354 39.0
BcaC06g30733 Brassica carinata HOM05D004725 ORTHO05D005683 3.2e-48 196.1 201 55.2
GSVIVG01034912001 Vitis vinifera HOM05D004725 ORTHO05D005683 3.2e-48 196.1 196 56.6
TWI09G0594 Tripterygium wilfordii HOM05D004725 ORTHO05D005683 1.2e-47 194.1 217 52.5
Ah.13g071340 Amaranthus hybridus HOM05D004725 ORTHO05D005683 1.7e-46 190.3 211 50.2
Haze_01314 Corylus avellana HOM05D004725 ORTHO05D005683 2.9e-46 189.5 162 64.8
SHI00123 Sapria himalayana HOM05D004725 ORTHO05D005683 4.3e-45 185.7 223 48.9
PGR031G0191 Punica granatum HOM05D004725 ORTHO05D005683 7.3e-45 184.9 218 49.5
FAN12G0673 Fragaria x ananassa HOM05D004725 ORTHO05D005683 8.9e-43 177.9 256 43.8
HPP92_027744 Vanilla planifolia HOM05D004725 ORTHO05D005683 2.6e-42 176.4 182 53.3
SMO351G0117 Selaginella moellendorffii HOM05D004725 ORTHO05D005683 7.5e-42 174.9 203 47.3
Pp3c12_20580 Physcomitrium patens HOM05D004725 ORTHO05D005683 1.3e-41 174.1 198 45.5
Mapoly0029s0136 Marchantia polymorpha HOM05D004725 ORTHO05D005683 2.4e-40 169.9 221 43.4
Hma1.2p1_0013F.1_g008380 Hydrangea macrophylla HOM05D004725 ORTHO05D005683 4.1e-40 169.1 131 65.6
MD13G1151200 Malus domestica HOM05D004725 ORTHO05D005683 4.1e-40 169.1 201 51.2
CARHR182700 Cardamine hirsuta HOM05D004725 ORTHO05D005683 7.8e-39 164.9 184 49.5
Atru.chr4.3042 Acer truncatum HOM05D004725 ORTHO05D005683 6.6e-38 161.8 149 59.7
BcaC06g30731 Brassica carinata HOM05D004725 ORTHO05D005683 6.6e-38 161.8 155 59.4
AUR62039263 Chenopodium quinoa HOM05D004725 ORTHO05D005683 8.6e-38 161.4 224 42.9
EL10Ac3g05524 Beta vulgaris HOM05D004725 ORTHO05D005683 1.6e-36 157.1 266 40.2
AagrBONN_evm.TU.Sc2ySwM_228.2917 Anthoceros agrestis HOM05D004725 ORTHO05D005683 5.2e-35 152.1 218 39.9
CSS0006068 Camellia sinensis var. sinensis HOM05D004725 ORTHO05D005683 5.2e-35 152.1 178 53.4
Ca_02282_v3 Cicer arietinum L. HOM05D004725 ORTHO05D005683 6.4e-33 145.2 129 64.3
Lalb_Chr20g0110441 Lupinus albus HOM05D004725 ORTHO05D005683 1.1e-32 144.4 111 67.6
FAN07G0549 Fragaria x ananassa HOM05D004725 ORTHO05D005683 4.1e-32 142.5 141 54.6
Cpa.g.sc9.42 Carica papaya HOM05D004725 ORTHO05D005683 4.6e-31 139.0 168 51.8
MD16G1152100 Malus domestica HOM05D004725 ORTHO05D005683 1.3e-30 137.5 172 52.9
CBR_g34308 Chara braunii HOM05D004725 ORTHO05D005683 1.2e-28 131.0 209 35.9
HPP92_026068 Vanilla planifolia HOM05D004725 ORTHO05D005683 8.9e-27 124.8 118 51.7
FvH4_4g20000 Fragaria vesca HOM05D004725 ORTHO05D005683 5.8e-26 122.1 161 46.6
Potri.010G147050 Populus trichocarpa HOM05D004725 ORTHO05D005683 7.6e-26 121.7 214 40.2
CAN.G327.11 Capsicum annuum HOM05D004725 ORTHO05D005683 3.2e-24 116.3 154 46.1
MCO14G052 Micromonas commoda HOM05D004725 ORTHO05D005683 9.2e-24 114.8 243 35.4
FAN22G2356 Fragaria x ananassa HOM05D004725 ORTHO05D005683 1.1e-21 107.8 86 66.3
Lalb_Chr20g0115601 Lupinus albus HOM05D004725 ORTHO05D005683 1.1e-21 107.8 106 55.7
CARHR287810 Cardamine hirsuta HOM05D004725 ORTHO05D005683 2.0e-18 97.1 168 40.5
RcHm_v2.0_Chr7g0210081 Rosa chinensis HOM05D004725 ORTHO05D005683 4.4e-18 95.9 99 53.5
Actinidia18458 Actinidia chinensis HOM05D004725 ORTHO05D005683 1.9e-16 90.5 54 81.5
Atru.chr3.3242 Acer truncatum HOM05D004725 ORTHO05D005683 9.3e-16 88.2 170 34.7
AUR62016226 Chenopodium quinoa HOM05D004725 ORTHO05D005683 2.1e-15 87.0 207 33.3
RcHm_v2.0_Chr6g0255221 Rosa chinensis HOM05D004725 ORTHO05D005683 2.7e-15 86.7 84 58.3
HPP92_026067 Vanilla planifolia HOM05D004725 ORTHO05D005683 6.6e-14 82.0 98 50.0
Cre09.g393600 Chlamydomonas reinhardtii HOM05D004725 ORTHO05D005683 1.4e-11 74.3 198 26.8
TWI73G0983 Tripterygium wilfordii HOM05D004725 ORTHO05D005683 1.8e-11 73.9 70 58.6
Zm00001eb143530 Zea mays HOM05D004725 ORTHO05D005683 2.6e-10 70.1 85 47.1
Zm00001eb401350 Zea mays HOM05D004725 ORTHO05D005683 7.6e-10 68.6 130 36.2
PRCOL_00004769 Prasinoderma coloniale HOM05D004725 ORTHO05D005683 1.7e-09 67.4 208 27.9
Sabra10G0113400 Salix brachista HOM05D004725 ORTHO05D005683 3.8e-09 66.2 143 32.9
GSVIVG01034926001 Vitis vinifera HOM05D004725 ORTHO05D005683 9.3e-08 61.6 45 73.3
Zm00001eb228430 Zea mays HOM05D004725 ORTHO05D005683 9.3e-08 61.6 75 46.7
Lalb_Chr20g0110431 Lupinus albus HOM05D004725 ORTHO05D005683 1.0e-06 58.2 63 47.6

Acer truncatum (2 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (3 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (3 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (3 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (3 genes)
Salix brachista (2 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (3 genes)
Vigna mungo (1 genes)
Vitis vinifera (3 genes)
Zea mays (4 genes)

Program Settings