Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018148 Camellia sinensis var. sinensis HOM05D003980 ORTHO05D005301 4.3e-26 120.6 60 100.0
CSS0014341 Camellia sinensis var. sinensis HOM05D003980 ORTHO05D005301 8.9e-16 86.3 46 93.5
CSS0032153 Camellia sinensis var. sinensis HOM05D003980 ORTHO05D005301 8.9e-16 86.3 53 81.1
CSS0008437 Camellia sinensis var. sinensis HOM05D003980 ORTHO05D005301 5.8e-15 83.6 53 79.2
CSS0026541 Camellia sinensis var. sinensis HOM05D003980 ORTHO05D005301 1.3e-14 82.4 48 83.3
COL.COLO4_37237 Corchorus olitorius HOM05D003980 ORTHO05D005301 3.2e-13 77.8 50 76.0
Ciclev10030650m.g Citrus clementina HOM05D003980 ORTHO05D005301 7.1e-13 76.6 50 78.0
Actinidia25530 Actinidia chinensis HOM05D003980 ORTHO05D005301 9.2e-13 76.3 50 78.0
Duzib205G0834 Durio zibethinus HOM05D003980 ORTHO05D005301 9.2e-13 76.3 50 78.0
Duzib084G0479 Durio zibethinus HOM05D003980 ORTHO05D005301 2.1e-12 75.1 50 76.0
Manes.06G125700 Manihot esculenta HOM05D003980 ORTHO05D005301 2.7e-12 74.7 50 74.0
Potri.015G105000 Populus trichocarpa HOM05D003980 ORTHO05D005301 2.7e-12 74.7 50 74.0
GSVIVG01008633001 Vitis vinifera HOM05D003980 ORTHO05D005301 2.7e-12 74.7 50 76.0
DCAR_021407 Daucus carota HOM05D003980 ORTHO05D005301 3.5e-12 74.3 50 76.0
MD14G1148800 Malus domestica HOM05D003980 ORTHO05D005301 3.5e-12 74.3 50 76.0
Thecc.03G138500 Theobroma cacao HOM05D003980 ORTHO05D005301 3.5e-12 74.3 50 74.0
CANSAT56G3290 Cannabis sativa HOM05D003980 ORTHO05D005301 4.6e-12 73.9 50 74.0
HanXRQChr16g0498871 Helianthus annuus HOM05D003980 ORTHO05D005301 6.0e-12 73.6 50 74.0
CSS0000982 Camellia sinensis var. sinensis HOM05D003980 ORTHO05D005301 7.8e-12 73.2 44 84.1
Cfa018720 Carpinus fangiana HOM05D003980 ORTHO05D005301 7.8e-12 73.2 50 70.0
ClCG06G018320 Citrullus lanatus HOM05D003980 ORTHO05D005301 7.8e-12 73.2 50 72.0
Haze_07113 Corylus avellana HOM05D003980 ORTHO05D005301 7.8e-12 73.2 50 70.0
MELO3C026163.2 Cucumis melo HOM05D003980 ORTHO05D005301 7.8e-12 73.2 50 72.0
CsaV3_1G000110 Cucumis sativus L. HOM05D003980 ORTHO05D005301 7.8e-12 73.2 50 72.0
Gohir.A09G248100 Gossypium hirsutum HOM05D003980 ORTHO05D005301 7.8e-12 73.2 50 74.0
Gohir.D09G248900 Gossypium hirsutum HOM05D003980 ORTHO05D005301 7.8e-12 73.2 50 74.0
Gorai.006G273300 Gossypium raimondii HOM05D003980 ORTHO05D005301 7.8e-12 73.2 50 74.0
Sabra15G0125200 Salix brachista HOM05D003980 ORTHO05D005301 7.8e-12 73.2 51 70.6
Atru.chr6.1901 Acer truncatum HOM05D003980 ORTHO05D005301 1.0e-11 72.8 50 70.0
Dinv13736 Davidia involucrata HOM05D003980 ORTHO05D005301 1.0e-11 72.8 44 79.5
Dinv23210 Davidia involucrata HOM05D003980 ORTHO05D005301 1.0e-11 72.8 50 74.0
CiPaw.11G001400 Carya illinoinensis HOM05D003980 ORTHO05D005301 1.7e-11 72.0 50 72.0
FvH4_5g09220 Fragaria vesca HOM05D003980 ORTHO05D005301 1.7e-11 72.0 50 72.0
FAN18G3345 Fragaria x ananassa HOM05D003980 ORTHO05D005301 1.7e-11 72.0 50 72.0
Glyma.08G008600 Glycine max HOM05D003980 ORTHO05D005301 1.7e-11 72.0 50 74.0
RcHm_v2.0_Chr7g0188941 Rosa chinensis HOM05D003980 ORTHO05D005301 1.7e-11 72.0 50 72.0
Glyma.05G201200 Glycine max HOM05D003980 ORTHO05D005301 2.3e-11 71.6 50 74.0
Lj9A485G82 Lonicera japonica HOM05D003980 ORTHO05D005301 2.3e-11 71.6 50 70.0
arahy.Tifrunner.gnm1.ann1.1NY8SK Arachis hypogaea HOM05D003980 ORTHO05D005301 3.0e-11 71.2 50 72.0
Lalb_Chr23g0272921 Lupinus albus HOM05D003980 ORTHO05D005301 3.0e-11 71.2 50 74.0
MD06G1132400 Malus domestica HOM05D003980 ORTHO05D005301 3.0e-11 71.2 50 72.0
Potri.012G105800 Populus trichocarpa HOM05D003980 ORTHO05D005301 3.0e-11 71.2 44 77.3
Sabra12G0078100 Salix brachista HOM05D003980 ORTHO05D005301 3.0e-11 71.2 44 77.3
Sed0025035 Sechium edule HOM05D003980 ORTHO05D005301 3.0e-11 71.2 50 70.0
VMungo0251G0815 Vigna mungo HOM05D003980 ORTHO05D005301 3.0e-11 71.2 51 70.6
FAN13G1995 Fragaria x ananassa HOM05D003980 ORTHO05D005301 3.9e-11 70.9 50 70.0
Lsat_1_v5_gn_4_84700 Lactuca sativa HOM05D003980 ORTHO05D005301 3.9e-11 70.9 50 70.0
Lj5A88T63 Lonicera japonica HOM05D003980 ORTHO05D005301 3.9e-11 70.9 44 77.3
Phvul.002G282600 Phaseolus vulgaris HOM05D003980 ORTHO05D005301 3.9e-11 70.9 50 72.0
ECA232G4466 Erigeron canadensis HOM05D003980 ORTHO05D005301 5.1e-11 70.5 50 68.0
FAN04G0599 Fragaria x ananassa HOM05D003980 ORTHO05D005301 5.1e-11 70.5 50 70.0
FAN08G3345 Fragaria x ananassa HOM05D003980 ORTHO05D005301 5.1e-11 70.5 50 70.0
PGR083G0225 Punica granatum HOM05D003980 ORTHO05D005301 5.1e-11 70.5 50 72.0
Hund10056 Selenicereus undatus HOM05D003980 ORTHO05D005301 5.1e-11 70.5 50 72.0
TWI39G0366 Tripterygium wilfordii HOM05D003980 ORTHO05D005301 5.1e-11 70.5 50 72.0
PSO591G0475 Papaver somniferum HOM05D003980 ORTHO05D005301 6.6e-11 70.1 44 77.3
PSO832G3889 Papaver somniferum HOM05D003980 ORTHO05D005301 6.6e-11 70.1 44 77.3
Phvul.009G164700 Phaseolus vulgaris HOM05D003980 ORTHO05D005301 6.6e-11 70.1 50 72.0
Ah.02g114660 Amaranthus hybridus HOM05D003980 ORTHO05D005301 8.6e-11 69.7 50 70.0
Lj4g0027174 Lotus japonicus HOM05D003980 ORTHO05D005301 8.6e-11 69.7 50 72.0
AUR62009517 Chenopodium quinoa HOM05D003980 ORTHO05D005301 1.1e-10 69.3 50 70.0
AUR62034771 Chenopodium quinoa HOM05D003980 ORTHO05D005301 1.1e-10 69.3 50 70.0
Cc04_g05920 Coffea canephora HOM05D003980 ORTHO05D005301 1.1e-10 69.3 44 77.3
DCAR_025658 Daucus carota HOM05D003980 ORTHO05D005301 1.1e-10 69.3 50 68.0
HanXRQChr09g0273931 Helianthus annuus HOM05D003980 ORTHO05D005301 1.1e-10 69.3 50 72.0
Prupe.5G143400 Prunus persica HOM05D003980 ORTHO05D005301 1.1e-10 69.3 50 70.0
Aa31LG11G3070 Aethionema arabicum HOM05D003980 ORTHO05D005301 1.5e-10 68.9 46 71.7
EL10Ac5g11306 Beta vulgaris HOM05D003980 ORTHO05D005301 1.5e-10 68.9 50 68.0
Aqoxy5G03175 Aquilegia oxysepala HOM05D003980 ORTHO05D005301 1.9e-10 68.6 50 66.0
MSTRG.11233 Avicennia marina HOM05D003980 ORTHO05D005301 1.9e-10 68.6 46 73.9
SalBow7G4845 Salvia bowleyana HOM05D003980 ORTHO05D005301 1.9e-10 68.6 50 70.0
Solyc03g118350.4 Solanum lycopersicum HOM05D003980 ORTHO05D005301 1.9e-10 68.6 50 72.0
Sopen03g037250 Solanum pennellii HOM05D003980 ORTHO05D005301 1.9e-10 68.6 50 72.0
PGSC0003DMG401014249 Solanum tuberosum HOM05D003980 ORTHO05D005301 1.9e-10 68.6 50 72.0
THA.LOC104821537 Tarenaya hassleriana HOM05D003980 ORTHO05D005301 1.9e-10 68.6 46 71.7
TWI14G0519 Tripterygium wilfordii HOM05D003980 ORTHO05D005301 1.9e-10 68.6 50 70.0
vmacro19166 Vaccinium macrocarpon HOM05D003980 ORTHO05D005301 1.9e-10 68.6 44 79.5
QL10p000901 Quercus lobata HOM05D003980 ORTHO05D005301 2.5e-10 68.2 50 68.0
AL6G34990 Arabidopsis lyrata HOM05D003980 ORTHO05D005301 3.3e-10 67.8 46 71.7
AT5G23720 Arabidopsis thaliana HOM05D003980 ORTHO05D005301 3.3e-10 67.8 46 71.7
Carub.0006s2147 Capsella rubella HOM05D003980 ORTHO05D005301 3.3e-10 67.8 46 71.7
CARHR189830 Cardamine hirsuta HOM05D003980 ORTHO05D005301 3.3e-10 67.8 46 71.7
Migut.I00610 Erythranthe guttata HOM05D003980 ORTHO05D005301 3.3e-10 67.8 44 72.7
Lalb_Chr13g0297021 Lupinus albus HOM05D003980 ORTHO05D005301 4.3e-10 67.4 50 68.0
Psat5g054480 Pisum sativum HOM05D003980 ORTHO05D005301 4.3e-10 67.4 50 70.0
unitig_22.g6271 Utricularia gibba HOM05D003980 ORTHO05D005301 4.3e-10 67.4 50 70.0
ATR0693G246 Amborella trichopoda HOM05D003980 ORTHO05D005301 5.6e-10 67.0 46 69.6
arahy.Tifrunner.gnm1.ann1.JJXJ29 Arachis hypogaea HOM05D003980 ORTHO05D005301 5.6e-10 67.0 50 68.0
arahy.Tifrunner.gnm1.ann1.US1BEE Arachis hypogaea HOM05D003980 ORTHO05D005301 5.6e-10 67.0 50 68.0
Glyma.04G200300 Glycine max HOM05D003980 ORTHO05D005301 5.6e-10 67.0 50 68.0
TPR.G21586 Trifolium pratense HOM05D003980 ORTHO05D005301 5.6e-10 67.0 50 70.0
Cpa.g.sc4.108 Carica papaya HOM05D003980 ORTHO05D005301 7.3e-10 66.6 50 68.0
Nn3g16303 Nelumbo nucifera HOM05D003980 ORTHO05D005301 9.5e-10 66.2 50 68.0
TPR.G12812 Trifolium pratense HOM05D003980 ORTHO05D005301 9.5e-10 66.2 51 70.6
TAR371G0735 Trochodendron aralioides HOM05D003980 ORTHO05D005301 9.5e-10 66.2 44 70.5
Rhsim08G0195900 Rhododendron simsii HOM05D003980 ORTHO05D005301 1.2e-09 65.9 44 75.0
BcaNung01844 Brassica carinata HOM05D003980 ORTHO05D005301 1.6e-09 65.5 46 69.6
C07p43870 Brassica napus HOM05D003980 ORTHO05D005301 1.6e-09 65.5 46 69.6
BolC7t44915H Brassica oleracea HOM05D003980 ORTHO05D005301 1.6e-09 65.5 46 69.6
Thhalv10003616m.g Eutrema salsugineum HOM05D003980 ORTHO05D005301 1.6e-09 65.5 46 69.6
Eucgr.B00073 Eucalyptus grandis HOM05D003980 ORTHO05D005301 2.1e-09 65.1 50 64.0
SHI14120 Sapria himalayana HOM05D003980 ORTHO05D005301 2.1e-09 65.1 57 61.4
Sp2g23510 Schrenkiella parvula HOM05D003980 ORTHO05D005301 2.1e-09 65.1 46 67.4
Hund02497 Selenicereus undatus HOM05D003980 ORTHO05D005301 2.8e-09 64.7 45 71.1
A06p34620 Brassica napus HOM05D003980 ORTHO05D005301 3.6e-09 64.3 46 67.4
BraA06t26390Z Brassica rapa HOM05D003980 ORTHO05D005301 3.6e-09 64.3 46 67.4
Ca_10885_v3 Cicer arietinum L. HOM05D003980 ORTHO05D005301 3.6e-09 64.3 46 69.6
VMungo1309G0598 Vigna mungo HOM05D003980 ORTHO05D005301 3.6e-09 64.3 50 66.0
Ca_17584_v3 Cicer arietinum L. HOM05D003980 ORTHO05D005301 4.7e-09 63.9 51 70.6
Lj1g0007025 Lotus japonicus HOM05D003980 ORTHO05D005301 4.7e-09 63.9 50 64.0
Medtr3g498735 Medicago truncatula HOM05D003980 ORTHO05D005301 4.7e-09 63.9 50 66.0
Psat7g039040 Pisum sativum HOM05D003980 ORTHO05D005301 4.7e-09 63.9 51 68.6
Sc04g0000260 Simmondsia chinensis HOM05D003980 ORTHO05D005301 6.2e-09 63.5 50 68.0
Nn4g22168 Nelumbo nucifera HOM05D003980 ORTHO05D005301 8.1e-09 63.2 44 70.5
Psat5g054520 Pisum sativum HOM05D003980 ORTHO05D005301 1.1e-08 62.8 51 64.7
Ca_16085_v3 Cicer arietinum L. HOM05D003980 ORTHO05D005301 1.8e-08 62.0 46 67.4
Medtr8g100000 Medicago truncatula HOM05D003980 ORTHO05D005301 1.8e-08 62.0 51 68.6
Os01g0311500 Oryza sativa ssp. japonica HOM05D003980 ORTHO05D005301 1.8e-08 62.0 50 62.0
Peaxi162Scf00314g00535 Petunia axillaris HOM05D003980 ORTHO05D005301 1.8e-08 62.0 45 71.1
MBI19_g26308_MAGBIO Magnolia biondii HOM05D003980 ORTHO05D005301 2.3e-08 61.6 44 65.9
Zm00001eb130450 Zea mays HOM05D003980 ORTHO05D005301 3.1e-08 61.2 44 65.9
Ca_14153_v3 Cicer arietinum L. HOM05D003980 ORTHO05D005301 5.2e-08 60.5 46 65.2
Lalb_Chr12g0202411 Lupinus albus HOM05D003980 ORTHO05D005301 6.8e-08 60.1 50 62.0
Nitab4.5_0000663g0190 Nicotiana tabacum HOM05D003980 ORTHO05D005301 1.2e-07 59.3 45 68.9
Zm00001eb340730 Zea mays HOM05D003980 ORTHO05D005301 1.2e-07 59.3 44 61.4
HPP92_006911 Vanilla planifolia HOM05D003980 ORTHO05D005301 1.5e-07 58.9 44 61.4
SEGI_36335 Sequoiadendron giganteum HOM05D003980 ORTHO05D005301 2.0e-07 58.5 50 56.0
Nitab4.5_0002450g0020 Nicotiana tabacum HOM05D003980 ORTHO05D005301 3.4e-07 57.8 45 68.9
CDE01G0794 Ceratophyllum demersum HOM05D003980 ORTHO05D005301 4.4e-07 57.4 46 58.7
Os01g0347000 Oryza sativa ssp. japonica HOM05D003980 ORTHO05D005301 7.6e-07 56.6 50 58.0

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (4 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (2 genes)
Lupinus albus (3 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (3 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings