Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017832 Camellia sinensis var. sinensis HOM05D004520 ORTHO05D005520 7.5e-144 513.8 261 100.0
CSS0031359 Camellia sinensis var. sinensis HOM05D004520 ORTHO05D005520 3.1e-121 438.7 223 99.6
Rhsim06G0085800 Rhododendron simsii HOM05D004520 ORTHO05D005520 2.7e-24 116.7 167 46.7
TWI12G0901 Tripterygium wilfordii HOM05D004520 ORTHO05D005520 1.8e-20 104.0 135 46.7
Gorai.010G044800 Gossypium raimondii HOM05D004520 ORTHO05D005520 2.3e-20 103.6 140 45.7
Gohir.D06G040100 Gossypium hirsutum HOM05D004520 ORTHO05D005520 4.0e-20 102.8 130 48.5
Potri.002G092000 Populus trichocarpa HOM05D004520 ORTHO05D005520 4.0e-20 102.8 143 44.1
Peaxi162Scf00160g01523 Petunia axillaris HOM05D004520 ORTHO05D005520 8.9e-20 101.7 135 45.9
Gohir.A06G039100 Gossypium hirsutum HOM05D004520 ORTHO05D005520 1.5e-19 100.9 131 48.1
Sabra05G0127200 Salix brachista HOM05D004520 ORTHO05D005520 2.6e-19 100.1 166 42.2
MD08G1176500 Malus domestica HOM05D004520 ORTHO05D005520 1.7e-18 97.4 143 44.1
Dinv44735 Davidia involucrata HOM05D004520 ORTHO05D005520 2.9e-18 96.7 115 47.8
TWI56G1051 Tripterygium wilfordii HOM05D004520 ORTHO05D005520 3.7e-18 96.3 180 39.4
Cfa015929 Carpinus fangiana HOM05D004520 ORTHO05D005520 6.4e-18 95.5 180 36.1
Potri.005G166900 Populus trichocarpa HOM05D004520 ORTHO05D005520 6.4e-18 95.5 190 40.5
Prupe.1G510900 Prunus persica HOM05D004520 ORTHO05D005520 8.3e-18 95.1 161 41.6
Actinidia10294 Actinidia chinensis HOM05D004520 ORTHO05D005520 2.4e-17 93.6 129 46.5
COL.COLO4_16491 Corchorus olitorius HOM05D004520 ORTHO05D005520 2.4e-17 93.6 128 46.1
Haze_00561 Corylus avellana HOM05D004520 ORTHO05D005520 2.4e-17 93.6 120 45.0
Duzib093G1357 Durio zibethinus HOM05D004520 ORTHO05D005520 2.4e-17 93.6 151 41.1
CiPaw.06G022900 Carya illinoinensis HOM05D004520 ORTHO05D005520 3.2e-17 93.2 132 45.5
PGR042G0053 Punica granatum HOM05D004520 ORTHO05D005520 3.2e-17 93.2 123 48.0
QL12p035753 Quercus lobata HOM05D004520 ORTHO05D005520 4.1e-17 92.8 162 41.4
Cc00_g24440 Coffea canephora HOM05D004520 ORTHO05D005520 5.4e-17 92.4 155 40.0
Ca_05234_v3 Cicer arietinum L. HOM05D004520 ORTHO05D005520 7.1e-17 92.0 123 43.1
FvH4_5g38140 Fragaria vesca HOM05D004520 ORTHO05D000031 9.2e-17 91.7 121 48.8
FAN18G4472 Fragaria x ananassa HOM05D004520 ORTHO05D005520 9.2e-17 91.7 121 48.8
MD15G1363200 Malus domestica HOM05D004520 ORTHO05D005520 1.2e-16 91.3 119 46.2
Duzib041G0092 Durio zibethinus HOM05D004520 ORTHO05D005520 2.1e-16 90.5 166 40.4
FAN08G3230 Fragaria x ananassa HOM05D004520 ORTHO05D005520 2.7e-16 90.1 118 50.0
Duzib041G0365 Durio zibethinus HOM05D004520 ORTHO05D005520 7.8e-16 88.6 170 41.2
RcHm_v2.0_Chr7g0240121 Rosa chinensis HOM05D004520 ORTHO05D005520 7.8e-16 88.6 136 44.9
Lsat_1_v5_gn_9_44740 Lactuca sativa HOM05D004520 ORTHO05D005520 1.0e-15 88.2 134 43.3
Carub.0001s2166 Capsella rubella HOM05D004520 ORTHO05D005520 1.3e-15 87.8 119 45.4
BcaB03g14234 Brassica carinata HOM05D004520 ORTHO05D005520 1.7e-15 87.4 118 45.8
Peaxi162Scf00168g00043 Petunia axillaris HOM05D004520 ORTHO05D005520 2.3e-15 87.0 201 37.3
Duzib116G0626 Durio zibethinus HOM05D004520 ORTHO05D005520 3.0e-15 86.7 172 39.0
CARHR022460 Cardamine hirsuta HOM05D004520 ORTHO05D005520 3.9e-15 86.3 120 45.0
Oeu024567.1 Olea europaea HOM05D004520 ORTHO05D005520 5.1e-15 85.9 179 36.9
FAN13G2359 Fragaria x ananassa HOM05D004520 ORTHO05D005520 6.6e-15 85.5 162 41.4
FAN04G1722 Fragaria x ananassa HOM05D004520 ORTHO05D005520 8.6e-15 85.1 150 42.0
A07p14760 Brassica napus HOM05D004520 ORTHO05D005520 1.1e-14 84.7 157 39.5
Thecc.08G113300 Theobroma cacao HOM05D004520 ORTHO05D005520 1.5e-14 84.3 214 37.4
Glyma.14G168100 Glycine max HOM05D004520 ORTHO05D005520 2.5e-14 83.6 118 41.5
Lj1g0026094 Lotus japonicus HOM05D004520 ORTHO05D005520 2.5e-14 83.6 171 37.4
Manes.02G156600 Manihot esculenta HOM05D004520 ORTHO05D005520 2.5e-14 83.6 160 39.4
Psat2g075760 Pisum sativum HOM05D004520 ORTHO05D005520 3.3e-14 83.2 121 46.3
BcaB07g32230 Brassica carinata HOM05D004520 ORTHO05D005520 4.3e-14 82.8 144 41.7
Gohir.D05G269800 Gossypium hirsutum HOM05D004520 ORTHO05D005520 4.3e-14 82.8 128 46.9
Lalb_Chr10g0102151 Lupinus albus HOM05D004520 ORTHO05D005520 4.3e-14 82.8 111 42.3
Ciclev10003829m.g Citrus clementina HOM05D004520 ORTHO05D005520 5.6e-14 82.4 130 40.8
AL1G35550 Arabidopsis lyrata HOM05D004520 ORTHO05D005520 7.3e-14 82.0 163 41.1
BolC7t42702H Brassica oleracea HOM05D004520 ORTHO05D005520 7.3e-14 82.0 141 40.4
Atru.chr13.1276 Acer truncatum HOM05D004520 ORTHO05D005520 9.5e-14 81.6 132 42.4
Nitab4.5_0006678g0010 Nicotiana tabacum HOM05D004520 ORTHO05D005520 9.5e-14 81.6 130 40.0
Prupe.1G552400 Prunus persica HOM05D004520 ORTHO05D005520 9.5e-14 81.6 120 43.3
BcaB03g11898 Brassica carinata HOM05D003425 ORTHO05D003897 1.2e-13 81.3 112 43.8
C07p21720 Brassica napus HOM05D004520 ORTHO05D005520 1.2e-13 81.3 112 46.4
MD15G1408400 Malus domestica HOM05D004520 ORTHO05D005520 1.2e-13 81.3 223 35.9
Manes.18G070900 Manihot esculenta HOM05D004520 ORTHO05D005520 1.6e-13 80.9 103 43.7
AT1G22110 Arabidopsis thaliana HOM05D004520 ORTHO05D005520 2.1e-13 80.5 159 39.6
arahy.Tifrunner.gnm1.ann1.1581IW Arachis hypogaea HOM05D004520 ORTHO05D005520 3.6e-13 79.7 111 44.1
A09p42670 Brassica napus HOM05D004520 ORTHO05D005520 3.6e-13 79.7 190 36.8
BraA09t39742Z Brassica rapa HOM05D004520 ORTHO05D005520 3.6e-13 79.7 190 36.8
CiPaw.05G232200 Carya illinoinensis HOM05D004520 ORTHO05D005520 3.6e-13 79.7 243 29.6
BcaC05g26135 Brassica carinata HOM05D004520 ORTHO05D005520 4.7e-13 79.3 188 37.2
BraA07t29221Z Brassica rapa HOM05D004520 ORTHO05D005520 4.7e-13 79.3 164 39.0
Gohir.A05G268200 Gossypium hirsutum HOM05D004520 ORTHO05D005520 4.7e-13 79.3 125 45.6
Aa31LG7G6090 Aethionema arabicum HOM05D004520 ORTHO05D005520 6.2e-13 79.0 118 44.9
Medtr5g061650 Medicago truncatula HOM05D004520 ORTHO05D005520 1.1e-12 78.2 73 53.4
C05p21170 Brassica napus HOM05D004520 ORTHO05D005520 1.4e-12 77.8 188 37.8
BolC5t30811H Brassica oleracea HOM05D004520 ORTHO05D005520 1.4e-12 77.8 188 37.8
Gorai.009G282400 Gossypium raimondii HOM05D004520 ORTHO05D005520 1.4e-12 77.8 128 44.5
BcaC06g34928 Brassica carinata HOM05D004520 ORTHO05D005520 1.8e-12 77.4 148 39.9
CANSAT25G0040 Cannabis sativa HOM05D004520 ORTHO05D005520 1.8e-12 77.4 118 42.4
BolC8t49777H Brassica oleracea HOM05D004520 ORTHO05D005520 2.3e-12 77.0 145 39.3
CANSAT25G0424 Cannabis sativa HOM05D004520 ORTHO05D005520 2.3e-12 77.0 119 42.0
CDE10G0363 Ceratophyllum demersum HOM05D004520 ORTHO05D005520 2.3e-12 77.0 162 35.2
Phvul.008G170000 Phaseolus vulgaris HOM05D004520 ORTHO05D005520 3.1e-12 76.6 86 47.7
BcaC07g39145 Brassica carinata HOM05D003425 ORTHO05D003897 4.0e-12 76.3 130 43.8
MD08G1219800 Malus domestica HOM05D004520 ORTHO05D005520 4.0e-12 76.3 71 57.7
arahy.Tifrunner.gnm1.ann1.8K5I59 Arachis hypogaea HOM05D004520 ORTHO05D005520 5.2e-12 75.9 128 40.6
Sopen04g028850 Solanum pennellii HOM05D004520 ORTHO05D005520 5.2e-12 75.9 94 45.7
Gohir.A05G230000 Gossypium hirsutum HOM05D004520 ORTHO05D005520 6.8e-12 75.5 152 35.5
Gohir.D02G082633 Gossypium hirsutum HOM05D004520 ORTHO05D005520 1.2e-11 74.7 113 46.0
TPR.G39080 Trifolium pratense HOM05D004520 ORTHO05D005520 1.2e-11 74.7 115 41.7
MELO3C022816.2 Cucumis melo HOM05D004520 ORTHO05D005520 1.5e-11 74.3 97 47.4
SalBow6G4633 Salvia bowleyana HOM05D004520 ORTHO05D005520 1.5e-11 74.3 115 42.6
Gorai.009G240500 Gossypium raimondii HOM05D004520 ORTHO05D005520 2.0e-11 73.9 179 35.8
MBI02_g37831_MAGBIO Magnolia biondii HOM05D004520 ORTHO05D005520 2.0e-11 73.9 68 54.4
Solyc04g072650.1 Solanum lycopersicum HOM05D004520 ORTHO05D005520 2.6e-11 73.6 83 50.6
unitig_578.g16210 Utricularia gibba HOM05D004520 ORTHO05D005520 2.6e-11 73.6 103 41.7
AT1G77932 Arabidopsis thaliana HOM05D004520 ORTHO05D005520 3.4e-11 73.2 76 52.6
Gohir.A02G075405 Gossypium hirsutum HOM05D004520 ORTHO05D005520 5.8e-11 72.4 113 45.1
Gohir.D05G232300 Gossypium hirsutum HOM05D004520 ORTHO05D005520 9.9e-11 71.6 212 33.5
PGSC0003DMG400027533 Solanum tuberosum HOM05D004520 ORTHO05D005520 9.9e-11 71.6 119 42.9
CDE10G1290 Ceratophyllum demersum HOM05D004520 ORTHO05D005520 1.3e-10 71.2 150 36.7
Nitab4.5_0002534g0030 Nicotiana tabacum HOM05D004520 ORTHO05D005520 1.3e-10 71.2 107 43.0
CsaV3_5G023810 Cucumis sativus L. HOM05D004520 ORTHO05D005520 2.2e-10 70.5 115 43.5
Gorai.005G092700 Gossypium raimondii HOM05D004520 ORTHO05D005520 2.2e-10 70.5 115 42.6
Migut.C00189 Erythranthe guttata HOM05D004520 ORTHO05D005520 2.9e-10 70.1 120 35.8
CARHR071410 Cardamine hirsuta HOM05D004520 ORTHO05D005520 3.8e-10 69.7 107 43.9
PSO210G7148 Papaver somniferum HOM05D004520 ORTHO05D005520 3.8e-10 69.7 64 54.7
PSO447G0143 Papaver somniferum HOM05D004520 ORTHO05D005520 3.8e-10 69.7 64 54.7
Prupe.1G096600 Prunus persica HOM05D004520 ORTHO05D005520 3.8e-10 69.7 75 50.7
Prupe.1G510300 Prunus persica HOM05D004520 ORTHO05D005520 3.8e-10 69.7 120 37.5
SalBow6G1129 Salvia bowleyana HOM05D004520 ORTHO05D005520 3.8e-10 69.7 138 39.1
Carub.0002s2483 Capsella rubella HOM05D004520 ORTHO05D005520 4.9e-10 69.3 98 39.8
ClCG03G008910 Citrullus lanatus HOM05D004520 ORTHO05D005520 6.4e-10 68.9 72 51.4
Glyma.13G086100 Glycine max HOM05D004520 ORTHO05D005520 1.4e-09 67.8 89 42.7
CAN.G535.13 Capsicum annuum HOM05D004520 ORTHO05D005520 1.9e-09 67.4 53 62.3
ATR0564G398 Amborella trichopoda HOM05D004520 ORTHO05D005520 2.4e-09 67.0 48 60.4
MD15G1409900 Malus domestica HOM05D004520 ORTHO05D005520 2.4e-09 67.0 142 38.0
Thecc.08G113500 Theobroma cacao HOM05D004520 ORTHO05D005520 2.4e-09 67.0 201 32.3
Migut.N02919 Erythranthe guttata HOM05D004520 ORTHO05D005520 3.2e-09 66.6 148 35.8
Actinidia10293 Actinidia chinensis HOM05D001087 ORTHO05D005520 5.4e-09 65.9 161 36.6
Sed0005622 Sechium edule HOM05D004520 ORTHO05D005520 5.4e-09 65.9 118 37.3
Phvul.009G027500 Phaseolus vulgaris HOM05D004520 ORTHO05D005520 7.1e-09 65.5 57 56.1
Dinv13052 Davidia involucrata HOM05D004520 ORTHO05D005520 9.2e-09 65.1 134 38.8
FAN18G1022 Fragaria x ananassa HOM05D004520 ORTHO05D005520 9.2e-09 65.1 157 33.1
FAN04G0088 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.2e-08 64.7 158 34.2
ECA232G0105 Erigeron canadensis HOM05D004520 ORTHO05D005520 1.6e-08 64.3 95 41.1
Potri.005G169900 Populus trichocarpa HOM05D004520 ORTHO05D005520 1.6e-08 64.3 167 35.3
CiPaw.05G232100 Carya illinoinensis HOM05D004520 ORTHO05D005520 2.7e-08 63.5 159 37.1
Aqoxy6G00530 Aquilegia oxysepala HOM05D004520 ORTHO05D005520 3.5e-08 63.2 73 46.6
COL.COLO4_16493 Corchorus olitorius HOM05D004520 ORTHO05D005520 4.6e-08 62.8 175 33.1
FAN13G0916 Fragaria x ananassa HOM05D004520 ORTHO05D005520 4.6e-08 62.8 157 33.8
FAN08G0369 Fragaria x ananassa HOM05D004520 ORTHO05D005520 6.0e-08 62.4 159 34.0
Manes.02G156700 Manihot esculenta HOM05D004520 ORTHO05D005520 6.0e-08 62.4 139 36.7
AL2G38200 Arabidopsis lyrata HOM05D004520 ORTHO05D005520 7.8e-08 62.0 125 37.6
FvH4_5g38160 Fragaria vesca HOM05D004520 ORTHO05D005520 1.0e-07 61.6 159 33.3
Lj4P108T23 Lonicera japonica HOM05D004520 ORTHO05D005520 1.0e-07 61.6 109 40.4
Sabra05G0127300 Salix brachista HOM05D004520 ORTHO05D005520 1.3e-07 61.2 178 32.0
TPR.G34 Trifolium pratense HOM05D004520 ORTHO05D005520 3.9e-07 59.7 110 38.2
SalBow7G1906 Salvia bowleyana HOM05D004520 ORTHO05D005520 5.1e-07 59.3 144 32.6
QL12p035728 Quercus lobata HOM05D004520 ORTHO05D005520 6.6e-07 58.9 173 33.5
Atru.chr3.816 Acer truncatum HOM05D004520 ORTHO05D005520 1.5e-06 57.8 125 36.8
A08p28610 Brassica napus HOM05D003425 ORTHO05D003897 1.5e-06 57.8 93 40.9
BraA08t34791Z Brassica rapa HOM05D003425 ORTHO05D003897 1.5e-06 57.8 93 40.9
Dinv44734 Davidia involucrata HOM05D001087 ORTHO05D001846 1.5e-06 57.8 156 35.9
ClCG03G008900 Citrullus lanatus HOM05D004520 ORTHO05D005520 9.6e-06 55.1 165 33.3

Acer truncatum (2 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (6 genes)
Brassica napus (5 genes)
Brassica oleracea (3 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (2 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (3 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (3 genes)
Durio zibethinus (4 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (8 genes)
Glycine max (2 genes)
Gossypium hirsutum (8 genes)
Gossypium raimondii (4 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (5 genes)
Manihot esculenta (3 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (4 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (3 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (2 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings