Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016906 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 2.9e-70 268.5 138 100.0
CSS0046374 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 6.1e-68 260.8 138 97.8
CSS0017464 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 3.8e-54 214.9 132 86.4
Rhsim04G0113300 Rhododendron simsii HOM05D005334 ORTHO05D006560 3.8e-54 214.9 123 89.4
Hma1.2p1_0964F.1_g242010 Hydrangea macrophylla HOM05D005334 ORTHO05D006560 4.2e-53 211.5 120 88.3
Actinidia05483 Actinidia chinensis HOM05D005334 ORTHO05D006560 7.2e-53 210.7 122 88.5
COL.COLO4_25710 Corchorus olitorius HOM05D005334 ORTHO05D006560 1.4e-51 206.5 122 82.8
Sopen11g005690 Solanum pennellii HOM05D005334 ORTHO05D006560 1.4e-51 206.5 122 84.4
PGSC0003DMG400016186 Solanum tuberosum HOM05D005334 ORTHO05D006560 1.4e-51 206.5 122 84.4
GSVIVG01003946001 Vitis vinifera HOM05D005334 ORTHO05D006560 1.4e-51 206.5 122 84.4
CAN.G1813.2 Capsicum annuum HOM05D005334 ORTHO05D006560 1.8e-51 206.1 122 83.6
Thecc.10G018300 Theobroma cacao HOM05D005334 ORTHO05D006560 1.8e-51 206.1 122 83.6
ClCG01G018260 Citrullus lanatus HOM05D005334 ORTHO05D006560 3.0e-51 205.3 122 84.4
Duzib128G0185 Durio zibethinus HOM05D005334 ORTHO05D006560 3.0e-51 205.3 122 82.8
Solyc11g010950.2 Solanum lycopersicum HOM05D005334 ORTHO05D006560 3.0e-51 205.3 122 83.6
Medtr8g007340 Medicago truncatula HOM05D005334 ORTHO05D006560 3.9e-51 204.9 122 85.2
Cfa006855 Carpinus fangiana HOM05D005334 ORTHO05D006560 5.2e-51 204.5 122 82.8
Peaxi162Scf00085g00115 Petunia axillaris HOM05D005334 ORTHO05D006560 8.8e-51 203.8 122 82.8
Psat4g223080 Pisum sativum HOM05D005334 ORTHO05D006560 8.8e-51 203.8 122 84.4
CiPaw.07G045200 Carya illinoinensis HOM05D005334 ORTHO05D006560 1.1e-50 203.4 122 82.8
Ciclev10008278m.g Citrus clementina HOM05D005334 ORTHO05D006560 1.5e-50 203.0 122 85.2
Ciclev10008715m.g Citrus clementina HOM05D005334 ORTHO05D006560 1.5e-50 203.0 122 85.2
Haze_03908 Corylus avellana HOM05D005334 ORTHO05D006560 3.3e-50 201.8 120 83.3
Glyma.13G008300 Glycine max HOM05D005334 ORTHO05D006560 3.3e-50 201.8 122 83.6
Nitab4.5_0000402g0140 Nicotiana tabacum HOM05D005334 ORTHO05D006560 3.3e-50 201.8 122 81.1
ECA233G4415 Erigeron canadensis HOM05D005334 ORTHO05D006560 4.4e-50 201.4 123 82.9
CsaV3_6G044840 Cucumis sativus L. HOM05D005334 ORTHO05D006560 5.7e-50 201.1 120 84.2
Gohir.D12G076300 Gossypium hirsutum HOM05D005334 ORTHO05D006560 5.7e-50 201.1 122 82.0
Gorai.008G084700 Gossypium raimondii HOM05D005334 ORTHO05D006560 7.4e-50 200.7 122 81.1
Lj2C525G9 Lonicera japonica HOM05D005334 ORTHO05D006560 7.4e-50 200.7 122 84.4
TPR.G5292 Trifolium pratense HOM05D005334 ORTHO05D006560 7.4e-50 200.7 122 83.6
CiPaw.07G044700 Carya illinoinensis HOM05D005334 ORTHO05D006560 1.3e-49 199.9 120 82.5
Ca_14799_v3 Cicer arietinum L. HOM05D005334 ORTHO05D006560 1.3e-49 199.9 122 82.0
Lalb_Chr12g0210501 Lupinus albus HOM05D005334 ORTHO05D006560 1.3e-49 199.9 122 83.6
Sabra10G0146100 Salix brachista HOM05D005334 ORTHO05D006560 1.3e-49 199.9 122 79.5
RcHm_v2.0_Chr6g0270401 Rosa chinensis HOM05D005334 ORTHO05D006560 2.2e-49 199.1 122 82.0
TWI34G1275 Tripterygium wilfordii HOM05D005334 ORTHO05D006560 2.2e-49 199.1 119 84.9
vmacro09003 Vaccinium macrocarpon HOM05D005334 ORTHO05D006560 2.2e-49 199.1 122 84.4
Lj3g0001207 Lotus japonicus HOM05D005334 ORTHO05D006560 3.7e-49 198.4 122 82.0
Phvul.010G045900 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 3.7e-49 198.4 122 82.8
Phvul.010G046100 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 3.7e-49 198.4 122 82.8
RcHm_v2.0_Chr6g0270301 Rosa chinensis HOM05D005334 ORTHO05D006560 3.7e-49 198.4 122 82.0
Sc03g0000510 Simmondsia chinensis HOM05D005334 ORTHO05D006560 3.7e-49 198.4 122 81.1
Prupe.1G076500 Prunus persica HOM05D005334 ORTHO05D006560 4.8e-49 198.0 122 82.8
QL06p036434 Quercus lobata HOM05D005334 ORTHO05D006560 4.8e-49 198.0 122 82.0
Lj2g0000099 Lotus japonicus HOM05D005334 ORTHO05D006560 6.3e-49 197.6 122 81.1
FAN26G1496 Fragaria x ananassa HOM05D005334 ORTHO05D006560 8.2e-49 197.2 122 80.3
Sed0026061 Sechium edule HOM05D005334 ORTHO05D006560 1.1e-48 196.8 119 81.5
CANSAT01G0836 Cannabis sativa HOM05D005334 ORTHO05D006560 1.8e-48 196.1 122 82.0
MELO3C007703.2 Cucumis melo HOM05D005334 ORTHO05D006560 1.8e-48 196.1 124 82.3
Cc07_g13790 Coffea canephora HOM05D005334 ORTHO05D006560 2.4e-48 195.7 123 81.3
MD01G1042400 Malus domestica HOM05D005334 ORTHO05D006560 2.4e-48 195.7 122 82.0
Potri.010G189500 Populus trichocarpa HOM05D005334 ORTHO05D006560 2.4e-48 195.7 122 78.7
FvH4_1g19290 Fragaria vesca HOM05D005334 ORTHO05D006560 5.3e-48 194.5 122 80.3
FAN19G2596 Fragaria x ananassa HOM05D005334 ORTHO05D006560 5.3e-48 194.5 122 80.3
arahy.Tifrunner.gnm1.ann1.DY9T0P Arachis hypogaea HOM05D005334 ORTHO05D006560 7.0e-48 194.1 122 81.1
arahy.Tifrunner.gnm1.ann1.D5QNLH Arachis hypogaea HOM05D005334 ORTHO05D006560 9.1e-48 193.7 122 81.1
PSO832G1169 Papaver somniferum HOM05D005334 ORTHO05D006560 9.1e-48 193.7 123 79.7
SGA_v2.0_scaffold45G17221 Striga asiatica HOM05D005334 ORTHO05D006560 1.2e-47 193.4 122 78.7
FvH4_7g07230 Fragaria vesca HOM05D005334 ORTHO05D006560 1.6e-47 193.0 122 77.9
CiPaw.07G045000 Carya illinoinensis HOM05D005334 ORTHO05D006560 3.5e-47 191.8 120 81.7
VMungo0331G1245 Vigna mungo HOM05D005334 ORTHO05D006560 3.5e-47 191.8 122 78.7
FAN03G2380 Fragaria x ananassa HOM05D005334 ORTHO05D006560 4.5e-47 191.4 122 78.7
Lsat_1_v5_gn_6_15620 Lactuca sativa HOM05D005334 ORTHO05D006560 5.9e-47 191.0 122 77.9
PSO013G0112 Papaver somniferum HOM05D005334 ORTHO05D006560 5.9e-47 191.0 123 78.9
Gohir.A12G078265 Gossypium hirsutum HOM05D005334 ORTHO05D006560 7.7e-47 190.7 122 80.3
Nn5g29815 Nelumbo nucifera HOM05D005334 ORTHO05D006560 1.0e-46 190.3 120 80.0
Eucgr.A00094 Eucalyptus grandis HOM05D005334 ORTHO05D006560 1.3e-46 189.9 122 76.2
Cpa.g.sc19.179 Carica papaya HOM05D005334 ORTHO05D006560 2.2e-46 189.1 122 77.9
Manes.10G013400 Manihot esculenta HOM05D005334 ORTHO05D006560 5.0e-46 188.0 122 77.9
PSO761G0425 Papaver somniferum HOM05D005334 ORTHO05D006560 6.5e-46 187.6 123 76.4
Aqoxy6G01573 Aquilegia oxysepala HOM05D005334 ORTHO05D006560 8.5e-46 187.2 118 78.0
Migut.K00814 Erythranthe guttata HOM05D005334 ORTHO05D006560 8.5e-46 187.2 123 79.7
FAN23G0357 Fragaria x ananassa HOM05D005334 ORTHO05D006560 8.5e-46 187.2 122 77.9
FAN23G0783 Fragaria x ananassa HOM05D005334 ORTHO05D006560 8.5e-46 187.2 122 77.9
PSO700G0130 Papaver somniferum HOM05D005334 ORTHO05D006560 8.5e-46 187.2 123 76.4
SalBow5G3116 Salvia bowleyana HOM05D005334 ORTHO05D006560 1.9e-45 186.0 122 77.0
SalBow5G4670 Salvia bowleyana HOM05D005334 ORTHO05D006560 1.9e-45 186.0 122 77.0
TAR625G0036 Trochodendron aralioides HOM05D005334 ORTHO05D006560 7.2e-45 184.1 112 82.1
Carub.0003s1053 Capsella rubella HOM05D005334 ORTHO05D006560 9.4e-45 183.7 122 74.6
PGR031G2068 Punica granatum HOM05D005334 ORTHO05D006560 9.4e-45 183.7 124 74.2
Thhalv10021017m.g Eutrema salsugineum HOM05D005334 ORTHO05D006560 2.7e-44 182.2 122 73.8
CARHR085780 Cardamine hirsuta HOM05D005334 ORTHO05D006560 3.6e-44 181.8 122 73.0
AUR62003692 Chenopodium quinoa HOM05D005334 ORTHO05D006560 4.7e-44 181.4 129 72.1
HanXRQChr08g0226671 Helianthus annuus HOM05D005334 ORTHO05D006560 4.7e-44 181.4 122 75.4
BcaC05g29390 Brassica carinata HOM05D005334 ORTHO05D006560 6.1e-44 181.0 122 73.8
A05p38080 Brassica napus HOM05D005334 ORTHO05D006560 6.1e-44 181.0 122 73.8
C05p56870 Brassica napus HOM05D005334 ORTHO05D006560 6.1e-44 181.0 122 73.8
BolC5t34351H Brassica oleracea HOM05D005334 ORTHO05D006560 6.1e-44 181.0 122 73.8
MSTRG.3723 Avicennia marina HOM05D005334 ORTHO05D006560 1.0e-43 180.3 122 74.6
Atru.chr12.1050 Acer truncatum HOM05D005334 ORTHO05D006560 1.4e-43 179.9 145 69.0
BraA05t22600Z Brassica rapa HOM05D005334 ORTHO05D006560 5.2e-43 177.9 122 72.1
Sp3g09500 Schrenkiella parvula HOM05D005334 ORTHO05D006560 1.2e-42 176.8 122 71.3
AT3G11220 Arabidopsis thaliana HOM05D005334 ORTHO05D006560 2.0e-42 176.0 119 73.1
BcaB06g25638 Brassica carinata HOM05D005334 ORTHO05D006560 2.0e-42 176.0 119 73.1
Os06g0639600 Oryza sativa ssp. japonica HOM05D005334 ORTHO05D006560 4.4e-42 174.9 120 74.2
THA.LOC104816551 Tarenaya hassleriana HOM05D005334 ORTHO05D006560 9.8e-42 173.7 122 71.3
unitig_0.g2648 Utricularia gibba HOM05D005334 ORTHO05D006560 1.3e-41 173.3 120 73.3
AUR62018003 Chenopodium quinoa HOM05D005334 ORTHO05D006560 2.2e-41 172.6 152 60.5
CSS0002721 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.4e-40 169.9 100 88.0
Aa31LG3G4530 Aethionema arabicum HOM05D005334 ORTHO05D006560 2.4e-40 169.1 122 71.3
AL3G22740 Arabidopsis lyrata HOM05D005334 ORTHO05D006560 2.4e-40 169.1 126 69.0
MBI10_g34777_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 2.4e-40 169.1 150 61.3
Zm00001eb387250 Zea mays HOM05D005334 ORTHO05D006560 7.0e-40 167.5 116 73.3
CiPaw.07G049700 Carya illinoinensis HOM05D005334 ORTHO05D006560 5.9e-39 164.5 122 73.0
SEGI_17743 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 5.5e-37 157.9 129 60.5
SHI03443 Sapria himalayana HOM05D005334 ORTHO05D006560 3.6e-36 155.2 121 65.3
ATR1153G009 Amborella trichopoda HOM05D005334 ORTHO05D006560 1.8e-35 152.9 120 66.7
CDE04G2384 Ceratophyllum demersum HOM05D005334 ORTHO05D006560 2.2e-33 146.0 119 64.7
ATR0022G031 Amborella trichopoda HOM05D005334 ORTHO05D006560 5.4e-32 141.4 120 65.0
CSS0026696 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 7.7e-31 137.5 72 95.8
Hund14075 Selenicereus undatus HOM05D005334 ORTHO05D006560 1.5e-29 133.3 82 79.3
AagrBONN_evm.TU.Sc2ySwM_117.1770 Anthoceros agrestis HOM05D005334 ORTHO05D006560 4.0e-27 125.2 124 52.4
MD01G1042700 Malus domestica HOM05D005334 ORTHO05D006560 2.9e-25 119.0 122 57.4
Pp3c9_23940 Physcomitrium patens HOM05D005334 ORTHO05D006560 1.1e-24 117.1 108 53.7
RcHm_v2.0_Chr2g0110581 Rosa chinensis HOM05D005334 ORTHO05D006560 1.4e-24 116.7 72 79.2
DCAR_003438 Daucus carota HOM05D005334 ORTHO05D006560 1.8e-24 116.3 71 78.9
Mapoly0006s0234 Marchantia polymorpha HOM05D005334 ORTHO05D006560 2.4e-24 115.9 111 52.3
Ah.02g123390 Amaranthus hybridus HOM05D005334 ORTHO05D006560 4.1e-24 115.2 122 55.7
Prupe.6G206700 Prunus persica HOM05D005334 ORTHO05D006560 1.3e-22 110.2 80 75.0
HPP92_008021 Vanilla planifolia HOM05D005334 ORTHO05D006560 1.5e-21 106.7 72 75.0
MBI03_g45376_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 1.6e-20 103.2 71 70.4
Glyma.03G108600 Glycine max HOM05D005334 ORTHO05D006560 2.1e-20 102.8 62 79.0
MBI03_g46739_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 8.0e-20 100.9 77 62.3
Dinv27014 Davidia involucrata HOM05D005334 ORTHO05D006560 9.5e-13 77.4 53 77.4
Thecc.09G278800 Theobroma cacao HOM05D005334 ORTHO05D006560 4.7e-12 75.1 40 90.0
SMO146G0066 Selaginella moellendorffii HOM05D005334 ORTHO05D006560 1.5e-10 70.1 72 47.2
Dinv36960 Davidia involucrata HOM05D005334 ORTHO05D006560 3.4e-10 68.9 40 87.5
CBR_g30786 Chara braunii HOM05D000019 ORTHO05D000002 2.7e-07 59.3 67 38.8

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (0 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (5 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (4 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (2 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (3 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (1 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (4 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (3 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings