Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 9.2e-312 1073.2 676 100.0
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 1.4e-234 816.6 574 93.6
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 2.9e-232 808.9 660 70.6
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 2.1e-230 802.7 687 67.2
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 1.4e-210 736.9 655 67.0
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 2.3e-205 719.5 664 62.7
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 1.9e-199 699.9 661 62.2
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 1.8e-197 693.3 669 71.0
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 2.3e-197 693.0 667 63.7
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 5.4e-194 681.8 662 64.8
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 1.2e-193 680.6 667 61.2
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 8.6e-192 674.5 668 62.4
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 8.6e-192 674.5 667 59.1
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 1.9e-191 673.3 669 69.5
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 2.5e-191 672.9 667 62.5
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 4.3e-191 672.2 671 70.2
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 6.2e-190 668.3 669 68.9
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 6.2e-190 668.3 674 61.9
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 4.4e-188 662.1 676 61.5
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 1.7e-187 660.2 669 60.8
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 9.2e-186 654.4 677 67.4
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 9.2e-186 654.4 696 59.6
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 3.5e-185 652.5 662 60.9
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 4.6e-185 652.1 674 60.7
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 7.3e-183 644.8 662 64.4
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 1.6e-182 643.7 675 58.8
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 1.1e-181 641.0 521 65.1
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 1.4e-181 640.6 666 58.9
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 2.4e-181 639.8 666 68.3
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 3.1e-181 639.4 666 60.5
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 6.8e-181 638.3 666 60.8
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 8.9e-181 637.9 667 58.6
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 2.0e-180 636.7 656 59.0
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 2.6e-180 636.3 662 58.6
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 4.4e-180 635.6 663 58.1
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 4.4e-180 635.6 668 56.3
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 1.7e-179 633.6 669 67.1
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 6.4e-179 631.7 684 61.5
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 1.6e-177 627.1 704 53.0
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 4.6e-177 625.5 659 58.6
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 1.3e-176 624.0 686 58.7
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 7.3e-175 618.2 676 58.7
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 6.2e-174 615.1 711 54.4
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 3.1e-173 612.8 669 55.8
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 9.0e-173 611.3 667 58.3
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 5.8e-172 608.6 691 56.2
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 7.6e-172 608.2 668 54.9
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 3.8e-171 605.9 669 55.0
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 1.9e-170 603.6 663 51.6
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 2.4e-170 603.2 661 59.8
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 3.2e-170 602.8 671 64.8
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 4.2e-170 602.4 527 60.0
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 5.4e-170 602.1 674 54.5
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 1.3e-168 597.4 667 54.7
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 1.7e-168 597.0 669 56.4
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 3.0e-168 596.3 677 53.5
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 3.9e-168 595.9 667 57.6
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 6.6e-168 595.1 676 60.5
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 1.5e-167 594.0 677 57.8
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 1.9e-167 593.6 680 53.1
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 2.5e-167 593.2 668 55.1
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 8.1e-166 588.2 666 53.8
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 8.1e-166 588.2 667 58.9
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 1.2e-164 584.3 663 61.7
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 3.2e-162 576.2 509 62.7
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 2.1e-161 573.5 666 61.7
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 3.5e-161 572.8 673 55.6
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 1.0e-160 571.2 665 58.9
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 1.3e-160 570.9 666 59.6
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 6.7e-160 568.5 666 53.9
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 1.9e-159 567.0 578 64.0
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 3.7e-158 562.8 574 57.5
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.2e-153 547.7 512 60.9
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 2.1e-153 547.0 671 58.4
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 7.9e-153 545.0 682 47.7
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.0e-152 544.7 512 60.9
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 1.3e-152 544.3 512 60.7
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 2.3e-152 543.5 514 60.3
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 7.1e-146 521.9 667 52.0
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 1.1e-143 514.6 507 53.8
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 4.3e-143 512.7 695 55.4
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 9.7e-143 511.5 666 53.3
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 4.1e-141 506.1 498 58.0
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 5.3e-141 505.8 668 50.9
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 8.5e-139 498.4 499 56.3
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 1.8e-136 490.7 502 56.2
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 3.0e-136 490.0 502 56.4
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 3.0e-136 490.0 497 52.9
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 4.5e-132 476.1 501 56.5
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 5.9e-132 475.7 500 53.6
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 1.4e-130 471.1 425 59.1
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 2.7e-129 466.8 496 52.6
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 1.7e-126 457.6 496 55.4
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 1.7e-126 457.6 496 55.4
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 3.1e-125 453.4 595 57.0
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 4.5e-124 449.5 495 54.3
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 5.9e-124 449.1 683 44.5
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.2e-113 414.8 512 50.4
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 1.7e-110 404.4 384 55.5
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 1.0e-104 385.2 470 47.7
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 3.5e-100 370.2 365 56.2
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 5.6e-98 362.8 631 46.1
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 1.3e-91 341.7 518 41.1
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 5.6e-90 336.3 612 43.3
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 2.8e-73 280.8 292 56.2
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.6e-65 255.0 223 61.9
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 2.6e-55 221.1 556 31.3
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 3.4e-55 220.7 221 53.8
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 1.8e-43 181.8 227 46.7
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 3.8e-38 164.1 572 29.2
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 2.0e-31 141.7 290 35.5
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 9.7e-26 122.9 168 47.6
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 1.2e-12 79.3 50 72.0
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 2.1e-12 78.6 187 55.6
CsaV3_4G032230 Cucumis sativus L. HOM05D006822 ORTHO05D008884 3.0e-11 74.7 86 51.2
Medtr7g075450 Medicago truncatula HOM05D006822 ORTHO05D008884 3.3e-10 71.2 88 48.9

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (0 genes)
Brassica napus (1 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (2 genes)
Daucus carota (0 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings