Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015623 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 2.2e-44 181.8 86 100.0
Thecc.04G277700 Theobroma cacao HOM05D003864 ORTHO05D004658 2.7e-18 95.1 51 86.3
Lj6A670T81 Lonicera japonica HOM05D003864 ORTHO05D004658 3.6e-18 94.7 51 82.4
Manes.15G016900 Manihot esculenta HOM05D003864 ORTHO05D004658 3.6e-18 94.7 51 86.3
Rhsim02G0013600 Rhododendron simsii HOM05D003864 ORTHO05D004658 3.6e-18 94.7 51 84.3
SGA_v2.0_scaffold57G20242 Striga asiatica HOM05D003864 ORTHO05D004658 3.6e-18 94.7 50 88.0
TAR633G1069 Trochodendron aralioides HOM05D003864 ORTHO05D004658 3.6e-18 94.7 51 84.3
CAN.G256.9 Capsicum annuum HOM05D003864 ORTHO05D004658 4.7e-18 94.4 51 86.3
CiPaw.02G086600 Carya illinoinensis HOM05D003864 ORTHO05D004658 6.1e-18 94.0 51 84.3
PGSC0003DMG400030786 Solanum tuberosum HOM05D003864 ORTHO05D004658 6.1e-18 94.0 51 86.3
GSVIVG01017804001 Vitis vinifera HOM05D003864 ORTHO05D004658 6.1e-18 94.0 50 84.0
COL.COLO4_13927 Corchorus olitorius HOM05D003864 ORTHO05D004658 8.0e-18 93.6 51 84.3
Nitab4.5_0000784g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 8.0e-18 93.6 51 86.3
Cc03_g02350 Coffea canephora HOM05D003864 ORTHO05D004658 1.0e-17 93.2 51 84.3
Hma1.2p1_0150F.1_g066600 Hydrangea macrophylla HOM05D003864 ORTHO05D004658 1.0e-17 93.2 51 84.3
Nitab4.5_0001054g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 1.0e-17 93.2 51 84.3
vmacro08202 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 1.0e-17 93.2 51 82.4
Haze_01063 Corylus avellana HOM05D003864 ORTHO05D004658 1.4e-17 92.8 51 82.4
QL06p007393 Quercus lobata HOM05D003864 ORTHO05D004658 1.8e-17 92.4 51 82.4
Rhsim04G0216400 Rhododendron simsii HOM05D003864 ORTHO05D004658 1.8e-17 92.4 51 82.4
Solyc01g067630.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 1.8e-17 92.4 51 84.3
Duzib151G0071 Durio zibethinus HOM05D003864 ORTHO05D004658 2.3e-17 92.0 51 82.4
Migut.G00209 Erythranthe guttata HOM05D003864 ORTHO05D004658 3.0e-17 91.7 50 84.0
Cfa015492 Carpinus fangiana HOM05D003864 ORTHO05D004658 4.0e-17 91.3 51 80.4
Nn4g25986 Nelumbo nucifera HOM05D003864 ORTHO05D004658 4.0e-17 91.3 51 82.4
TAR362G0395 Trochodendron aralioides HOM05D003864 ORTHO05D004658 4.0e-17 91.3 51 82.4
CSS0001944 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 5.2e-17 90.9 51 80.4
CSS0038005 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 5.2e-17 90.9 51 80.4
Ciclev10005325m.g Citrus clementina HOM05D003864 ORTHO05D004658 5.2e-17 90.9 51 82.4
Nn3g21324 Nelumbo nucifera HOM05D003864 ORTHO05D004658 5.2e-17 90.9 51 80.4
Peaxi162Scf00386g00316 Petunia axillaris HOM05D003864 ORTHO05D004658 5.2e-17 90.9 51 82.4
Aqoxy2G03115 Aquilegia oxysepala HOM05D003864 ORTHO05D004658 6.8e-17 90.5 51 78.4
Actinidia00050 Actinidia chinensis HOM05D003864 ORTHO05D004658 8.8e-17 90.1 49 81.6
Actinidia23428 Actinidia chinensis HOM05D003864 ORTHO05D004658 8.8e-17 90.1 51 82.4
Gohir.A10G101440 Gossypium hirsutum HOM05D003864 ORTHO05D004658 8.8e-17 90.1 51 80.4
Gohir.D10G166700 Gossypium hirsutum HOM05D003864 ORTHO05D004658 8.8e-17 90.1 51 80.4
Gorai.011G185900 Gossypium raimondii HOM05D003864 ORTHO05D004658 8.8e-17 90.1 51 80.4
Eucgr.B01266 Eucalyptus grandis HOM05D003864 ORTHO05D004658 1.2e-16 89.7 51 78.4
Manes.03G191300 Manihot esculenta HOM05D003864 ORTHO05D004658 1.2e-16 89.7 51 82.4
PGR031G0559 Punica granatum HOM05D003864 ORTHO05D004658 1.2e-16 89.7 51 80.4
MSTRG.10054 Avicennia marina HOM05D003864 ORTHO05D004658 1.5e-16 89.4 50 82.0
Potri.008G204700 Populus trichocarpa HOM05D003864 ORTHO05D004658 1.5e-16 89.4 51 80.4
Sabra08G0157300 Salix brachista HOM05D003864 ORTHO05D004658 1.5e-16 89.4 51 80.4
RcHm_v2.0_Chr4g0421021 Rosa chinensis HOM05D003864 ORTHO05D004658 2.0e-16 89.0 50 80.0
CiPaw.01G152900 Carya illinoinensis HOM05D003864 ORTHO05D004658 2.6e-16 88.6 51 78.4
Nitab4.5_0001459g0140 Nicotiana tabacum HOM05D003864 ORTHO05D004658 2.6e-16 88.6 51 80.4
Peaxi162Scf00033g01410 Petunia axillaris HOM05D003864 ORTHO05D004658 2.6e-16 88.6 50 84.0
vmacro15256 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 4.4e-16 87.8 51 78.4
vmacro22597 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 4.4e-16 87.8 51 78.4
FvH4_4g17200 Fragaria vesca HOM05D003864 ORTHO05D004658 7.5e-16 87.0 50 78.0
FAN07G1078 Fragaria x ananassa HOM05D003864 ORTHO05D004658 7.5e-16 87.0 50 78.0
FAN17G0790 Fragaria x ananassa HOM05D003864 ORTHO05D004658 7.5e-16 87.0 50 78.0
FAN22G0711 Fragaria x ananassa HOM05D003864 ORTHO05D004658 7.5e-16 87.0 50 78.0
LjContig00389g0005087 Lotus japonicus HOM05D003864 ORTHO05D004658 7.5e-16 87.0 53 73.6
Medtr2g020190 Medicago truncatula HOM05D003864 ORTHO05D004658 7.5e-16 87.0 50 80.0
RcHm_v2.0_Chr4g0421081 Rosa chinensis HOM05D003864 ORTHO05D004658 7.5e-16 87.0 50 78.0
ClCG06G005360 Citrullus lanatus HOM05D003864 ORTHO05D004658 9.8e-16 86.7 50 78.0
Prupe.1G142000 Prunus persica HOM05D003864 ORTHO05D004658 1.3e-15 86.3 50 78.0
Atru.chr4.2755 Acer truncatum HOM05D003864 ORTHO05D004658 1.7e-15 85.9 49 77.6
MD13G1173800 Malus domestica HOM05D003864 ORTHO05D004658 1.7e-15 85.9 50 78.0
Nitab4.5_0004537g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 1.7e-15 85.9 51 76.5
Oeu044793.1 Olea europaea HOM05D003864 ORTHO05D004658 1.7e-15 85.9 51 76.5
Phvul.002G188400 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 1.7e-15 85.9 50 76.0
MD16G1174800 Malus domestica HOM05D003864 ORTHO05D004658 2.2e-15 85.5 50 76.0
Sed0015457 Sechium edule HOM05D003864 ORTHO05D004658 2.2e-15 85.5 50 76.0
CsaV3_6G017400 Cucumis sativus L. HOM05D003864 ORTHO05D004658 2.8e-15 85.1 50 76.0
AL4G36380 Arabidopsis lyrata HOM05D003864 ORTHO05D004658 3.7e-15 84.7 51 74.5
Ca_00573_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 3.7e-15 84.7 50 74.0
THA.LOC104820237 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 3.7e-15 84.7 51 76.5
TPR.G1486 Trifolium pratense HOM05D003864 ORTHO05D004658 3.7e-15 84.7 50 76.0
BcaB01g03648 Brassica carinata HOM05D003864 ORTHO05D004658 4.8e-15 84.3 51 72.5
BcaB02g09145 Brassica carinata HOM05D003864 ORTHO05D004658 4.8e-15 84.3 51 74.5
A03p21870 Brassica napus HOM05D003864 ORTHO05D004658 4.8e-15 84.3 51 72.5
C03p25940 Brassica napus HOM05D003864 ORTHO05D004658 4.8e-15 84.3 51 72.5
BraA03t11423Z Brassica rapa HOM05D003864 ORTHO05D004658 4.8e-15 84.3 51 72.5
Hund20596 Selenicereus undatus HOM05D003864 ORTHO05D004658 4.8e-15 84.3 50 76.0
arahy.Tifrunner.gnm1.ann1.CLS5KG Arachis hypogaea HOM05D003864 ORTHO05D004658 6.3e-15 84.0 50 76.0
CDE05G0625 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 6.3e-15 84.0 51 74.5
Sed0008062 Sechium edule HOM05D003864 ORTHO05D004658 6.3e-15 84.0 50 74.0
Sc19g0004950 Simmondsia chinensis HOM05D003864 ORTHO05D004658 6.3e-15 84.0 53 71.7
TWI53G0015 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 6.3e-15 84.0 51 78.4
TWI53G1008 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 6.3e-15 84.0 51 78.4
Lalb_Chr07g0188241 Lupinus albus HOM05D003864 ORTHO05D004658 8.3e-15 83.6 50 76.0
PSO210G7573 Papaver somniferum HOM05D003864 ORTHO05D004658 8.3e-15 83.6 51 76.5
VMungo0251G3051 Vigna mungo HOM05D003864 ORTHO05D004658 8.3e-15 83.6 50 74.0
CDE01G0506 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 1.1e-14 83.2 51 70.6
MELO3C021355.2 Cucumis melo HOM05D003864 ORTHO05D004658 1.1e-14 83.2 50 76.0
Thhalv10016876m.g Eutrema salsugineum HOM05D003864 ORTHO05D004658 1.1e-14 83.2 51 72.5
arahy.Tifrunner.gnm1.ann1.WPBE4U Arachis hypogaea HOM05D003864 ORTHO05D004658 1.4e-14 82.8 50 74.0
Carub.0004s2113 Capsella rubella HOM05D003864 ORTHO05D004658 1.4e-14 82.8 51 70.6
DCAR_027110 Daucus carota HOM05D003864 ORTHO05D004658 1.8e-14 82.4 51 70.6
Glyma.13G215300 Glycine max HOM05D003864 ORTHO05D004658 1.8e-14 82.4 50 74.0
BcaC02g12030 Brassica carinata HOM05D003864 ORTHO05D004658 2.4e-14 82.0 51 70.6
A05p07200 Brassica napus HOM05D003864 ORTHO05D004658 2.4e-14 82.0 51 70.6
C04p08680 Brassica napus HOM05D003864 ORTHO05D004658 2.4e-14 82.0 51 70.6
BraA05t19685Z Brassica rapa HOM05D003864 ORTHO05D004658 2.4e-14 82.0 51 70.6
Lalb_Chr18g0055711 Lupinus albus HOM05D003864 ORTHO05D004658 2.4e-14 82.0 50 74.0
PSO170G3769 Papaver somniferum HOM05D003864 ORTHO05D004658 2.4e-14 82.0 51 74.5
AT2G39080 Arabidopsis thaliana HOM05D003864 ORTHO05D004658 3.1e-14 81.6 51 72.5
arahy.Tifrunner.gnm1.ann1.858I9V Arachis hypogaea HOM05D003864 ORTHO05D004658 3.1e-14 81.6 50 72.0
CARHR133840 Cardamine hirsuta HOM05D003864 ORTHO05D004658 3.1e-14 81.6 51 72.5
CDE12G0314 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 3.1e-14 81.6 51 74.5
Glyma.05G133900 Glycine max HOM05D003864 ORTHO05D004658 3.1e-14 81.6 50 74.0
DCAR_002443 Daucus carota HOM05D003864 ORTHO05D004658 4.1e-14 81.3 49 73.5
Phvul.006G161500 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 4.1e-14 81.3 50 74.0
Ah.12g064180 Amaranthus hybridus HOM05D003864 ORTHO05D004658 5.4e-14 80.9 50 72.0
C04p08610 Brassica napus HOM05D003864 ORTHO05D004658 5.4e-14 80.9 51 70.6
Glyma.08G088600 Glycine max HOM05D003864 ORTHO05D004658 5.4e-14 80.9 50 72.0
Lj4g0016445 Lotus japonicus HOM05D003864 ORTHO05D004658 5.4e-14 80.9 50 72.0
Lalb_Chr20g0118111 Lupinus albus HOM05D003864 ORTHO05D004658 9.1e-14 80.1 49 71.4
Psat1g187240 Pisum sativum HOM05D003864 ORTHO05D004658 9.1e-14 80.1 46 78.3
unitig_748.g8370 Utricularia gibba HOM05D003864 ORTHO05D004658 9.1e-14 80.1 50 72.0
EL10Ac6g14524 Beta vulgaris HOM05D003864 ORTHO05D004658 1.2e-13 79.7 50 74.0
BcaC02g12038 Brassica carinata HOM05D003864 ORTHO05D004658 1.2e-13 79.7 51 68.6
Cpa.g.sc1008.4 Carica papaya HOM05D003864 ORTHO05D004658 1.6e-13 79.3 55 70.9
SGA_v2.0_scaffold89G27550 Striga asiatica HOM05D003864 ORTHO05D004658 1.6e-13 79.3 50 72.0
THA.LOC104821766 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 1.6e-13 79.3 51 68.6
Glyma.15G097900 Glycine max HOM05D003864 ORTHO05D004658 2.0e-13 79.0 51 74.5
Os01g0367400 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 2.7e-13 78.6 51 64.7
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 3.5e-13 78.2 51 66.7
ATR0706G015 Amborella trichopoda HOM05D003864 ORTHO05D004658 4.5e-13 77.8 51 70.6
Ca_18234_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 4.5e-13 77.8 53 64.2
Medtr4g094742 Medicago truncatula HOM05D003864 ORTHO05D004658 4.5e-13 77.8 50 68.0
Os01g0367100 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 4.5e-13 77.8 51 64.7
AUR62002937 Chenopodium quinoa HOM05D003864 ORTHO05D004658 5.9e-13 77.4 50 70.0
AUR62007746 Chenopodium quinoa HOM05D003864 ORTHO05D004658 5.9e-13 77.4 50 70.0
Aa31LG5G20520 Aethionema arabicum HOM05D003864 ORTHO05D004658 7.7e-13 77.0 51 62.7
Lsat_1_v5_gn_5_56881 Lactuca sativa HOM05D003864 ORTHO05D004658 7.7e-13 77.0 51 72.5
PGR004G1016 Punica granatum HOM05D003864 ORTHO05D004658 1.0e-12 76.6 51 60.8
HPP92_017180 Vanilla planifolia HOM05D003864 ORTHO05D004658 1.0e-12 76.6 50 64.0
Sp4g21430 Schrenkiella parvula HOM05D003864 ORTHO05D004658 1.3e-12 76.3 51 66.7
TPR.G23836 Trifolium pratense HOM05D003864 ORTHO05D004658 1.3e-12 76.3 50 68.0
Zm00001eb131760 Zea mays HOM05D003864 ORTHO05D004658 2.3e-12 75.5 51 64.7
arahy.Tifrunner.gnm1.ann1.ZU35GG Arachis hypogaea HOM05D003864 ORTHO05D004658 3.3e-11 71.6 42 76.2
ECA240G1720 Erigeron canadensis HOM05D003864 ORTHO05D004658 5.5e-11 70.9 51 66.7
HanXRQChr13g0411221 Helianthus annuus HOM05D003864 ORTHO05D004658 7.2e-11 70.5 51 66.7
Mapoly0090s0075 Marchantia polymorpha HOM05D003864 ORTHO05D004658 7.2e-11 70.5 51 60.8
SHI00297 Sapria himalayana HOM05D003864 ORTHO05D004658 7.2e-11 70.5 53 62.3
Zm00001eb341670 Zea mays HOM05D003864 ORTHO05D004658 7.2e-11 70.5 51 58.8
Dinv02075 Davidia involucrata HOM05D003864 ORTHO05D035062 1.6e-10 69.3 53 64.2
Dinv08007 Davidia involucrata HOM05D003864 ORTHO05D035062 1.6e-10 69.3 53 64.2
AagrBONN_evm.TU.Sc2ySwM_344.1910 Anthoceros agrestis HOM05D003864 ORTHO05D004658 3.4e-08 61.6 49 55.1
MBI19_g26585_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 3.4e-08 61.6 51 58.8
Pp3c12_8620 Physcomitrium patens HOM05D003864 ORTHO05D004658 2.2e-07 58.9 50 50.0
Pp3c13_19760 Physcomitrium patens HOM05D003864 ORTHO05D004658 8.3e-07 57.0 50 48.0

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (5 genes)
Brassica oleracea (1 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (4 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (3 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (3 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings