Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014605 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 0.0e+00 1101.3 549 100.0
CSS0026005 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 3.6e-305 1050.8 549 96.2
Rhsim13G0212600 Rhododendron simsii HOM05D002030 ORTHO05D007413 2.9e-238 828.6 494 81.6
Dinv05065 Davidia involucrata HOM05D002030 ORTHO05D007413 3.7e-233 811.6 541 75.0
Hma1.2p1_0872F.1_g231160 Hydrangea macrophylla HOM05D002030 ORTHO05D007413 3.1e-208 728.8 472 74.6
Ciclev10018312m.g Citrus clementina HOM05D002030 ORTHO05D007413 1.1e-200 703.7 522 67.2
Haze_02982 Corylus avellana HOM05D002030 ORTHO05D007413 1.8e-200 703.0 516 66.9
Cfa010958 Carpinus fangiana HOM05D002030 ORTHO05D007413 7.7e-199 697.6 516 66.3
QL04p021544 Quercus lobata HOM05D002030 ORTHO05D007413 7.7e-199 697.6 510 67.1
Duzib168G1726 Durio zibethinus HOM05D002030 ORTHO05D007413 6.5e-198 694.5 512 67.0
Cfa019819 Carpinus fangiana HOM05D002030 ORTHO05D007413 7.2e-197 691.0 516 65.7
TWI09G0205 Tripterygium wilfordii HOM05D002030 ORTHO05D007413 8.0e-196 687.6 493 66.9
CiPaw.06G055000 Carya illinoinensis HOM05D002030 ORTHO05D007413 1.8e-195 686.4 516 65.1
TAR628G0894 Trochodendron aralioides HOM05D002030 ORTHO05D007413 2.0e-194 682.9 552 63.0
Cc01_g00100 Coffea canephora HOM05D002030 ORTHO05D007413 2.6e-194 682.6 485 69.5
COL.COLO4_33273 Corchorus olitorius HOM05D002030 ORTHO05D007413 3.4e-194 682.2 491 68.4
Cpa.g.sc529.1 Carica papaya HOM05D002030 ORTHO05D007413 1.3e-193 680.2 484 69.6
MSTRG.19666 Avicennia marina HOM05D002030 ORTHO05D007413 8.3e-193 677.6 457 70.5
CANSAT25G2826 Cannabis sativa HOM05D002030 ORTHO05D007413 1.8e-192 676.4 517 63.6
Prupe.1G578000 Prunus persica HOM05D002030 ORTHO05D007413 3.5e-191 672.2 473 67.4
Oeu024896.1 Olea europaea HOM05D002030 ORTHO05D007413 4.5e-191 671.8 477 67.9
Atru.chr3.2803 Acer truncatum HOM05D002030 ORTHO05D007413 1.7e-190 669.8 467 69.8
MD11G1194100 Malus domestica HOM05D002030 ORTHO05D007413 2.9e-190 669.1 490 64.7
Manes.02G141000 Manihot esculenta HOM05D002030 ORTHO05D007413 2.9e-190 669.1 476 68.5
Potri.001G277200 Populus trichocarpa HOM05D002030 ORTHO05D007413 5.0e-190 668.3 539 61.8
RcHm_v2.0_Chr6g0267091 Rosa chinensis HOM05D002030 ORTHO05D007413 8.0e-188 661.0 454 69.6
Gohir.A05G071600 Gossypium hirsutum HOM05D002030 ORTHO05D007413 1.8e-187 659.8 549 60.1
Nn7g36615 Nelumbo nucifera HOM05D002030 ORTHO05D007413 3.0e-187 659.1 511 63.4
Lsat_1_v5_gn_5_164660 Lactuca sativa HOM05D002030 ORTHO05D007413 6.8e-187 657.9 487 66.1
Nitab4.5_0002358g0010 Nicotiana tabacum HOM05D002030 ORTHO05D007413 5.7e-186 654.8 507 62.7
Sabra16G0171300 Salix brachista HOM05D002030 ORTHO05D007413 6.3e-185 651.4 539 60.7
HanXRQChr10g0319281 Helianthus annuus HOM05D002030 ORTHO05D007413 2.7e-183 646.0 471 65.0
Lalb_Chr02g0151181 Lupinus albus HOM05D002030 ORTHO05D007413 1.0e-182 644.0 473 66.4
FvH4_3g28960 Fragaria vesca HOM05D002030 ORTHO05D007413 1.9e-181 639.8 455 67.5
Peaxi162Scf00108g00034 Petunia axillaris HOM05D002030 ORTHO05D007413 1.9e-181 639.8 467 67.5
MD15G1397300 Malus domestica HOM05D002030 ORTHO05D007413 2.5e-181 639.4 449 65.9
Gorai.009G075600 Gossypium raimondii HOM05D002030 ORTHO05D007413 3.3e-181 639.0 549 59.4
CAN.G993.31 Capsicum annuum HOM05D002030 ORTHO05D007413 9.5e-181 637.5 467 64.7
Lj4P151T58 Lonicera japonica HOM05D002030 ORTHO05D007413 1.2e-180 637.1 454 70.0
EL10Ac4g10126 Beta vulgaris HOM05D002030 ORTHO05D007413 8.0e-180 634.4 522 59.4
EL10Ac4g10162 Beta vulgaris HOM05D002030 ORTHO05D007413 2.3e-179 632.9 522 59.2
PGSC0003DMG401026992 Solanum tuberosum HOM05D002030 ORTHO05D007413 4.0e-179 632.1 481 62.8
AUR62039829 Chenopodium quinoa HOM05D002030 ORTHO05D004391 1.5e-178 630.2 523 59.7
THA.LOC104800445 Tarenaya hassleriana HOM05D002030 ORTHO05D007413 4.4e-178 628.6 475 63.4
Migut.J01395 Erythranthe guttata HOM05D002030 ORTHO05D007413 9.8e-178 627.5 457 67.6
Aqoxy1G00344 Aquilegia oxysepala HOM05D002030 ORTHO05D007413 6.4e-177 624.8 550 57.3
MELO3C015133.2 Cucumis melo HOM05D002030 ORTHO05D007413 8.3e-177 624.4 488 63.7
Solyc06g071630.2 Solanum lycopersicum HOM05D002030 ORTHO05D007413 1.1e-176 624.0 481 61.7
CsaV3_1G043250 Cucumis sativus L. HOM05D002030 ORTHO05D007413 1.4e-176 623.6 477 64.2
ClCG03G012710 Citrullus lanatus HOM05D002030 ORTHO05D007413 1.9e-176 623.2 491 63.1
Sc19g0005890 Simmondsia chinensis HOM05D002030 ORTHO05D007413 4.1e-176 622.1 498 60.6
PSO339G1606 Papaver somniferum HOM05D002030 ORTHO05D007413 7.0e-176 621.3 504 60.7
SHI24995 Sapria himalayana HOM05D002030 ORTHO05D007413 1.2e-175 620.5 478 62.8
Sopen06g027940 Solanum pennellii HOM05D002030 ORTHO05D007413 2.7e-175 619.4 481 60.7
PSO384G3354 Papaver somniferum HOM05D002030 ORTHO05D007413 3.5e-175 619.0 500 61.0
RcHm_v2.0_Chr2g0127281 Rosa chinensis HOM05D002030 ORTHO05D007413 6.6e-174 614.8 488 61.7
Rhsim13G0218500 Rhododendron simsii HOM05D002030 ORTHO05D007413 1.8e-171 606.7 496 64.1
MBI03_g13094_MAGBIO Magnolia biondii HOM05D002030 ORTHO05D007413 1.5e-170 603.6 537 57.9
Ah.04g162000 Amaranthus hybridus HOM05D002030 ORTHO05D007413 7.5e-170 601.3 534 56.9
arahy.Tifrunner.gnm1.ann1.DSBP33 Arachis hypogaea HOM05D002030 ORTHO05D007413 1.7e-169 600.1 463 63.3
arahy.Tifrunner.gnm1.ann1.59T0PU Arachis hypogaea HOM05D002030 ORTHO05D007413 4.9e-169 598.6 463 63.1
Psat4g003440 Pisum sativum HOM05D002030 ORTHO05D007413 3.2e-168 595.9 468 62.4
Lj5g0021026 Lotus japonicus HOM05D002030 ORTHO05D007413 1.3e-166 590.5 457 61.7
Actinidia06954 Actinidia chinensis HOM05D002030 ORTHO05D007413 1.7e-166 590.1 340 83.2
Thecc.09G250300 Theobroma cacao HOM05D002030 ORTHO05D007413 5.1e-166 588.6 384 72.9
SGA_v2.0_scaffold45G17005 Striga asiatica HOM05D002030 ORTHO05D007413 1.1e-165 587.4 455 61.5
Medtr4g132910 Medicago truncatula HOM05D002030 ORTHO05D007413 1.5e-165 587.0 477 60.8
unitig_0.g561 Utricularia gibba HOM05D002030 ORTHO05D007413 2.9e-161 572.8 455 60.9
AUR62000179 Chenopodium quinoa HOM05D002030 ORTHO05D007413 6.4e-161 571.6 523 56.2
VMungo0720G1521 Vigna mungo HOM05D002030 ORTHO05D007413 1.4e-160 570.5 461 60.5
Phvul.007G141800 Phaseolus vulgaris HOM05D002030 ORTHO05D007413 1.7e-158 563.5 458 59.4
AL7G41540 Arabidopsis lyrata HOM05D002030 ORTHO05D007413 2.3e-158 563.1 470 58.9
Carub.0007s2761 Capsella rubella HOM05D002030 ORTHO05D007413 1.9e-157 560.1 481 57.8
Thhalv10017599m.g Eutrema salsugineum HOM05D002030 ORTHO05D007413 3.6e-156 555.8 461 59.4
Sp7g12690 Schrenkiella parvula HOM05D002030 ORTHO05D007413 3.6e-156 555.8 497 57.7
C03p22450 Brassica napus HOM05D002030 ORTHO05D007413 4.0e-155 552.4 451 59.9
BolC3t14628H Brassica oleracea HOM05D002030 ORTHO05D007413 8.9e-155 551.2 451 59.6
Aa31LG9G2740 Aethionema arabicum HOM05D002030 ORTHO05D007413 2.0e-154 550.1 488 55.3
Thhalv10027440m.g Eutrema salsugineum HOM05D002030 ORTHO05D007413 1.7e-153 547.0 469 58.0
PGR102G2312 Punica granatum HOM05D002030 ORTHO05D007413 1.4e-152 543.9 526 54.0
BraA03t11180Z Brassica rapa HOM05D002030 ORTHO05D007413 5.4e-152 542.0 451 59.6
ATR0693G336 Amborella trichopoda HOM05D002030 ORTHO05D007413 2.7e-151 539.7 526 51.5
CARHR220820 Cardamine hirsuta HOM05D002030 ORTHO05D007413 4.6e-151 538.9 461 57.5
A03p19250 Brassica napus HOM05D002030 ORTHO05D007413 7.8e-151 538.1 451 59.2
AT4G14590 Arabidopsis thaliana HOM05D002030 ORTHO05D007413 7.3e-149 531.6 502 54.2
HPP92_008257 Vanilla planifolia HOM05D002030 ORTHO05D007413 1.3e-148 530.8 457 54.9
Ca_21049_v3 Cicer arietinum L. HOM05D002030 ORTHO05D007413 1.1e-147 527.7 508 55.1
Glyma.20G191000 Glycine max HOM05D002030 ORTHO05D007413 3.8e-145 519.2 465 57.8
RcHm_v2.0_Chr6g0255981 Rosa chinensis HOM05D002030 ORTHO05D007413 1.4e-144 517.3 352 69.3
Peaxi162Scf00177g00919 Petunia axillaris HOM05D002030 ORTHO05D007413 6.9e-139 498.4 364 65.9
GSVIVG01037252001 Vitis vinifera HOM05D002030 ORTHO05D007413 1.1e-136 491.1 552 50.2
BcaC08g44279 Brassica carinata HOM05D002030 ORTHO05D007413 1.5e-133 480.7 469 54.2
C06p16980 Brassica napus HOM05D002030 ORTHO05D007413 1.5e-133 480.7 469 54.2
TPR.G37056 Trifolium pratense HOM05D002030 ORTHO05D007413 3.7e-132 476.1 349 65.3
CSS0011008 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 2.4e-131 473.4 257 93.0
Mapoly0033s0111 Marchantia polymorpha HOM05D002030 ORTHO05D007413 1.5e-130 470.7 456 51.1
ECA248G2873 Erigeron canadensis HOM05D002030 ORTHO05D007413 1.9e-125 453.8 361 62.6
SEGI_26527 Sequoiadendron giganteum HOM05D002030 ORTHO05D007413 6.2e-124 448.7 468 47.9
AagrBONN_evm.TU.Sc2ySwM_368.2374 Anthoceros agrestis HOM05D002030 ORTHO05D007413 4.0e-123 446.0 538 45.4
arahy.Tifrunner.gnm1.ann1.G6N61A Arachis hypogaea HOM05D002030 ORTHO05D007413 1.4e-120 437.6 374 58.8
Pp3c16_4000 Physcomitrium patens HOM05D002030 ORTHO05D007413 3.2e-120 436.4 462 50.0
CDE02G3397 Ceratophyllum demersum HOM05D002030 ORTHO05D007413 6.9e-115 418.7 333 61.6
Gohir.D05G074500 Gossypium hirsutum HOM05D002030 ORTHO05D007413 5.0e-113 412.5 359 57.7
PSO478G2842 Papaver somniferum HOM05D002030 ORTHO05D007413 6.5e-113 412.1 363 58.4
SMO141G0167 Selaginella moellendorffii HOM05D002030 ORTHO05D007413 3.2e-112 409.8 470 44.9
Eucgr.B03727 Eucalyptus grandis HOM05D002030 ORTHO05D007413 4.2e-112 409.5 466 45.9
Cc04_g16190 Coffea canephora HOM05D002030 ORTHO05D007413 7.2e-112 408.7 467 48.2
CBR_g18996 Chara braunii HOM05D002030 ORTHO05D007413 3.6e-103 379.8 409 46.7
HanXRQChr14g0432371 Helianthus annuus HOM05D002030 ORTHO05D007413 1.8e-102 377.5 367 53.1
Zm00001eb091720 Zea mays HOM05D002030 ORTHO05D007413 9.4e-80 302.0 313 49.2
Sed0013906 Sechium edule HOM05D002030 ORTHO05D007413 3.3e-72 276.9 219 63.0
BolC6t36898H Brassica oleracea HOM05D002030 ORTHO05D007413 9.5e-72 275.4 492 38.2
Os11g0171400 Oryza sativa ssp. japonica HOM05D002030 ORTHO05D007413 7.5e-69 265.8 252 51.6
BcaC01g05780 Brassica carinata HOM05D002030 ORTHO05D007413 2.4e-67 260.8 208 60.1
Nitab4.5_0001515g0060 Nicotiana tabacum HOM05D002030 ORTHO05D007413 1.7e-65 254.6 167 69.5
COL.COLO4_19604 Corchorus olitorius HOM05D002030 ORTHO05D007413 3.9e-65 253.4 196 64.3
Atru.chr1.1605 Acer truncatum HOM05D002030 ORTHO05D007413 5.6e-64 249.6 179 67.0
FAN21G2573 Fragaria x ananassa HOM05D002030 ORTHO05D007413 5.0e-57 226.5 190 59.5
DCAR_031630 Daucus carota HOM05D002030 ORTHO05D007413 7.8e-50 202.6 147 65.3
MD00G1154100 Malus domestica HOM05D002030 ORTHO05D007413 6.4e-44 183.0 154 57.8
BcaC01g05781 Brassica carinata HOM05D002030 ORTHO05D007413 1.4e-43 181.8 117 71.8
Glyma.10G199232 Glycine max HOM05D002030 ORTHO05D007413 3.2e-27 127.5 146 47.3
Nitab4.5_0001515g0100 Nicotiana tabacum HOM05D002030 ORTHO05D007413 1.5e-21 108.6 62 75.8
Sc16g0005130 Simmondsia chinensis HOM05D002030 ORTHO05D007413 9.3e-19 99.4 103 48.5
Medtr4g132950 Medicago truncatula HOM05D002030 ORTHO05D007413 2.8e-15 87.8 79 55.7
DCAR_031631 Daucus carota HOM05D002030 ORTHO05D007413 6.0e-10 70.1 84 44.0
vmacro05339 Vaccinium macrocarpon HOM05D002030 ORTHO05D007413 5.1e-09 67.0 158 36.7
Solyc12g010650.1 Solanum lycopersicum HOM05D000161 ORTHO05D000111 1.6e-07 62.0 42 57.1

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (2 genes)
Brassica carinata (3 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (1 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (3 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (3 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (3 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings