Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014339 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 2.1e-141 505.8 264 100.0
CSS0015025 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 2.8e-138 495.4 264 98.1
Dinv27208 Davidia involucrata HOM05D006138 ORTHO05D007778 2.8e-106 389.0 264 78.4
Actinidia38756 Actinidia chinensis HOM05D006138 ORTHO05D007778 2.6e-104 382.5 264 76.9
vmacro15557 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 5.7e-99 364.8 253 75.9
TAR362G0162 Trochodendron aralioides HOM05D006138 ORTHO05D007778 2.3e-92 342.8 257 68.9
vmacro15559 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 1.2e-91 340.5 270 68.1
Oeu025031.1 Olea europaea HOM05D006138 ORTHO05D007778 9.8e-91 337.4 255 69.0
GSVIVG01020999001 Vitis vinifera HOM05D006138 ORTHO05D007778 1.1e-89 334.0 255 68.2
RhsimUnG0035600 Rhododendron simsii HOM05D006138 ORTHO05D007778 4.5e-88 328.6 392 51.5
Lj6A392G25 Lonicera japonica HOM05D006138 ORTHO05D007778 7.7e-88 327.8 262 65.3
Cc03_g08330 Coffea canephora HOM05D006138 ORTHO05D007778 2.2e-87 326.2 264 63.6
Rhsim02G0060900 Rhododendron simsii HOM05D006138 ORTHO05D007778 6.5e-87 324.7 409 49.1
Lj6A407G21 Lonicera japonica HOM05D006138 ORTHO05D007778 1.1e-86 323.9 262 64.5
MSTRG.9735 Avicennia marina HOM05D006138 ORTHO05D007778 2.1e-85 319.7 254 65.7
Nn1g07955 Nelumbo nucifera HOM05D006138 ORTHO05D007778 6.1e-85 318.2 256 63.3
Thecc.04G198400 Theobroma cacao HOM05D006138 ORTHO05D007778 1.4e-84 317.0 262 59.2
Migut.G00745 Erythranthe guttata HOM05D006138 ORTHO05D007778 1.5e-83 313.5 255 65.9
SalBow8G0822 Salvia bowleyana HOM05D006138 ORTHO05D007778 7.5e-83 311.2 255 63.9
SalBow8G2056 Salvia bowleyana HOM05D006138 ORTHO05D007778 3.7e-82 308.9 255 63.5
Gohir.A05G323100 Gossypium hirsutum HOM05D006138 ORTHO05D007778 4.1e-81 305.4 264 57.6
Peaxi162Scf00047g00230 Petunia axillaris HOM05D006138 ORTHO05D007778 9.2e-81 304.3 249 62.2
Gorai.009G350500 Gossypium raimondii HOM05D006138 ORTHO05D007778 4.5e-80 302.0 264 57.2
CAN.G1565.12 Capsicum annuum HOM05D006138 ORTHO05D007778 7.7e-80 301.2 251 61.0
Cpa.g.sc83.29 Carica papaya HOM05D006138 ORTHO05D007778 6.6e-79 298.1 258 59.7
DCAR_026640 Daucus carota HOM05D006138 ORTHO05D007778 8.6e-79 297.7 257 60.7
Potri.001G317900 Populus trichocarpa HOM05D006138 ORTHO05D007778 8.6e-79 297.7 261 57.1
Cfa014952 Carpinus fangiana HOM05D006138 ORTHO05D007778 1.5e-78 297.0 262 61.5
TWI53G0419 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 3.3e-78 295.8 258 58.9
Manes.15G055900 Manihot esculenta HOM05D006138 ORTHO05D007778 4.3e-78 295.4 262 57.6
Gohir.D05G326000 Gossypium hirsutum HOM05D006138 ORTHO05D007778 2.1e-77 293.1 264 56.1
SGA_v2.0_scaffold19G08768 Striga asiatica HOM05D006138 ORTHO05D007778 2.8e-77 292.7 257 58.8
PGSC0003DMG400026422 Solanum tuberosum HOM05D006138 ORTHO05D007778 8.0e-77 291.2 251 59.8
TWI09G0334 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 3.0e-76 289.3 254 58.3
Nitab4.5_0003101g0010 Nicotiana tabacum HOM05D006138 ORTHO05D007778 1.2e-75 287.3 257 58.4
COL.COLO4_20197 Corchorus olitorius HOM05D006138 ORTHO05D007778 1.5e-75 287.0 264 55.7
Nitab4.5_0000401g0220 Nicotiana tabacum HOM05D006138 ORTHO05D007778 2.0e-75 286.6 259 57.9
CiPaw.02G065100 Carya illinoinensis HOM05D006138 ORTHO05D007778 3.7e-74 282.3 264 58.7
Atru.chr4.1604 Acer truncatum HOM05D006138 ORTHO05D007778 1.4e-73 280.4 222 62.6
Sc13g0000300 Simmondsia chinensis HOM05D006138 ORTHO05D007778 1.2e-72 277.3 255 56.5
Solyc09g092180.3 Solanum lycopersicum HOM05D006138 ORTHO05D007778 2.7e-72 276.2 251 56.6
Sopen09g035050 Solanum pennellii HOM05D006138 ORTHO05D007778 1.0e-71 274.2 251 56.2
CANSAT78G1344 Cannabis sativa HOM05D006138 ORTHO05D007778 1.1e-70 270.8 258 55.0
CANSAT78G2425 Cannabis sativa HOM05D006138 ORTHO05D007778 1.1e-70 270.8 258 55.0
Lsat_1_v5_gn_6_60661 Lactuca sativa HOM05D006138 ORTHO05D007778 1.5e-70 270.4 261 57.1
THA.LOC104804805 Tarenaya hassleriana HOM05D006138 ORTHO05D007778 8.0e-69 264.6 249 52.2
PSO017G1394 Papaver somniferum HOM05D006138 ORTHO05D007778 5.2e-68 261.9 255 54.1
MD04G1014100 Malus domestica HOM05D006138 ORTHO05D007778 1.2e-67 260.8 260 55.0
HanXRQChr07g0185891 Helianthus annuus HOM05D006138 ORTHO05D007778 2.0e-67 260.0 260 55.8
Carub.0003s2421 Capsella rubella HOM05D006138 ORTHO05D007778 2.6e-67 259.6 264 50.4
CsaV3_3G010820 Cucumis sativus L. HOM05D006138 ORTHO05D007778 1.7e-66 256.9 258 51.9
ClCG05G003180 Citrullus lanatus HOM05D006138 ORTHO05D007778 2.9e-66 256.1 258 51.9
AUR62020846 Chenopodium quinoa HOM05D006138 ORTHO05D007778 3.7e-66 255.8 228 57.9
Sp3g21610 Schrenkiella parvula HOM05D006138 ORTHO05D007778 4.9e-66 255.4 264 50.8
Sabra16G0201200 Salix brachista HOM05D006138 ORTHO05D007778 6.4e-66 255.0 358 42.7
AT3G23910 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 8.3e-66 254.6 264 49.6
Thhalv10002763m.g Eutrema salsugineum HOM05D006138 ORTHO05D007778 1.4e-65 253.8 260 50.8
Sed0019269 Sechium edule HOM05D006138 ORTHO05D007778 2.4e-65 253.1 258 51.6
AL3G38900 Arabidopsis lyrata HOM05D006138 ORTHO05D007778 3.2e-65 252.7 265 50.9
A07p08490 Brassica napus HOM05D006138 ORTHO05D007778 9.2e-65 251.1 262 48.1
BcaC06g35587 Brassica carinata HOM05D006138 ORTHO05D007778 1.2e-64 250.8 264 48.9
AT3G24255 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 1.6e-64 250.4 264 48.5
C07p13230 Brassica napus HOM05D006138 ORTHO05D007778 1.6e-64 250.4 262 48.9
BolC7t41815H Brassica oleracea HOM05D006138 ORTHO05D007778 1.6e-64 250.4 262 48.9
Glyma.11G255500 Glycine max HOM05D006138 ORTHO05D007778 1.6e-64 250.4 254 51.2
Aa31LG8G10490 Aethionema arabicum HOM05D006138 ORTHO05D007778 3.5e-64 249.2 263 47.9
Aqoxy2G04005 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 1.7e-63 246.9 251 54.2
Aqoxy360s001 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 1.7e-63 246.9 251 54.2
Ah.04g149320 Amaranthus hybridus HOM05D006138 ORTHO05D007778 1.1e-62 244.2 256 50.8
BraA07t28634Z Brassica rapa HOM05D006138 ORTHO05D007778 2.5e-62 243.0 262 46.9
VMungo1383G1063 Vigna mungo HOM05D000127 ORTHO05D000243 1.6e-61 240.4 255 49.0
PGR004G2157 Punica granatum HOM05D006138 ORTHO05D007778 6.2e-61 238.4 249 51.4
BcaB06g26554 Brassica carinata HOM05D006138 ORTHO05D007778 1.8e-60 236.9 264 48.1
ECA233G3278 Erigeron canadensis HOM05D006138 ORTHO05D007778 1.8e-60 236.9 245 54.3
CDE05G2116 Ceratophyllum demersum HOM05D006138 ORTHO05D007778 3.1e-60 236.1 255 50.2
Ca_16395_v3 Cicer arietinum L. HOM05D006138 ORTHO05D007778 5.2e-60 235.3 253 48.6
Eucgr.L02926 Eucalyptus grandis HOM05D006138 ORTHO05D007778 2.6e-59 233.0 221 53.8
Phvul.001G267400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 7.5e-59 231.5 246 49.6
Eucgr.H00039 Eucalyptus grandis HOM05D006138 ORTHO05D007778 9.8e-59 231.1 220 53.6
Lalb_Chr23g0278421 Lupinus albus HOM05D006138 ORTHO05D007778 6.4e-58 228.4 262 46.9
Lj6g0009885 Lotus japonicus HOM05D006138 ORTHO05D007778 1.4e-57 227.3 259 47.1
PSO063G4547 Papaver somniferum HOM05D006138 ORTHO05D007778 3.2e-57 226.1 221 53.8
arahy.Tifrunner.gnm1.ann1.3M33GA Arachis hypogaea HOM05D006138 ORTHO05D007778 1.3e-55 220.7 261 47.5
arahy.Tifrunner.gnm1.ann1.HYZ2KB Arachis hypogaea HOM05D006138 ORTHO05D007778 1.9e-54 216.9 261 46.7
Ciclev10005758m.g Citrus clementina HOM05D006138 ORTHO05D007778 2.3e-52 209.9 170 62.4
Psat5g102360 Pisum sativum HOM05D006138 ORTHO05D007778 2.3e-52 209.9 260 43.1
QL10p052654 Quercus lobata HOM05D006138 ORTHO05D007778 4.0e-52 209.1 394 38.1
unitig_37.g12032 Utricularia gibba HOM05D006138 ORTHO05D007778 1.2e-48 197.6 254 44.1
Glyma.18G001700 Glycine max HOM05D006138 ORTHO05D007778 1.5e-46 190.7 204 48.5
AUR62018570 Chenopodium quinoa HOM05D006138 ORTHO05D007778 3.6e-45 186.0 222 48.6
EL10Ac3g07466 Beta vulgaris HOM05D006138 ORTHO05D007778 3.1e-44 183.0 222 47.3
Oeu025032.1 Olea europaea HOM05D006138 ORTHO05D007778 1.2e-43 181.0 138 68.8
Os04g0379800 Oryza sativa ssp. japonica HOM05D006138 ORTHO05D007778 1.5e-43 180.6 253 39.9
TPR.G24162 Trifolium pratense HOM05D006138 ORTHO05D007778 2.0e-43 180.3 243 42.0
HPP92_023190 Vanilla planifolia HOM05D006138 ORTHO05D007778 8.4e-42 174.9 249 41.0
Duzib268G1255 Durio zibethinus HOM05D006138 ORTHO05D007778 4.0e-36 156.0 150 53.3
Haze_11642 Corylus avellana HOM05D006138 ORTHO05D007778 6.4e-34 148.7 222 45.0
Gohir.A12G078622 Gossypium hirsutum HOM05D006138 ORTHO05D007778 1.3e-31 141.0 118 57.6
FAN22G1553 Fragaria x ananassa HOM05D006138 ORTHO05D007778 9.6e-30 134.8 145 51.7
RcHm_v2.0_Chr4g0414021 Rosa chinensis HOM05D006138 ORTHO05D007778 6.2e-29 132.1 145 50.3
FAN12G1205 Fragaria x ananassa HOM05D006138 ORTHO05D007778 1.1e-28 131.3 145 50.3
FvH4_4g13460 Fragaria vesca HOM05D006138 ORTHO05D007778 1.4e-28 131.0 145 50.3
Hma1.2p1_0017F.1_g011170 Hydrangea macrophylla HOM05D006138 ORTHO05D007778 1.2e-27 127.9 109 65.1
Zm00001eb085830 Zea mays HOM05D006138 ORTHO05D007778 4.6e-24 115.9 254 31.1
Actinidia16488 Actinidia chinensis HOM05D006138 ORTHO05D007778 2.3e-23 113.6 85 74.1
RcHm_v2.0_Chr4g0414071 Rosa chinensis HOM05D006138 ORTHO05D007778 3.7e-21 106.3 120 51.7
Prupe.1G161100 Prunus persica HOM05D006138 ORTHO05D007778 4.8e-21 105.9 107 54.2
Hund24401 Selenicereus undatus HOM05D006138 ORTHO05D007778 1.5e-19 100.9 99 55.6
FAN07G2199 Fragaria x ananassa HOM05D006138 ORTHO05D007778 1.0e-15 88.2 83 56.6
Gohir.D12G210200 Gossypium hirsutum HOM05D006138 ORTHO05D007778 5.1e-15 85.9 74 58.1
MELO3C006299.2 Cucumis melo HOM05D006138 ORTHO05D007778 6.7e-15 85.5 99 46.5
Hund29337 Selenicereus undatus HOM05D006138 ORTHO05D007778 4.3e-14 82.8 123 39.8
Hund29338 Selenicereus undatus HOM05D006138 ORTHO05D007778 4.3e-14 82.8 123 39.8
Phvul.001G135400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 5.7e-14 82.4 94 46.8
Mapoly0008s0044 Marchantia polymorpha HOM05D006138 ORTHO05D007778 1.4e-12 77.8 257 24.9
SHI01022 Sapria himalayana HOM05D006138 ORTHO05D007778 1.7e-10 70.9 68 51.5
Nitab4.5_0001652g0120 Nicotiana tabacum HOM05D006138 ORTHO05D007778 3.9e-07 59.7 99 39.4

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (0 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (3 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (3 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings