Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013415 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.0e-254 882.9 432 100.0
CSS0029858 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 5.0e-201 704.5 474 78.9
CSS0030960 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 4.7e-175 618.2 478 70.9
CSS0003141 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 8.1e-143 511.1 324 81.8
Rhsim07G0212400 Rhododendron simsii HOM05D003682 ORTHO05D004224 3.2e-131 472.6 540 50.9
Actinidia19624 Actinidia chinensis HOM05D003682 ORTHO05D004224 3.8e-116 422.5 480 51.0
Actinidia29628 Actinidia chinensis HOM05D003682 ORTHO05D004224 6.4e-116 421.8 480 51.5
Cfa003049 Carpinus fangiana HOM05D003682 ORTHO05D004224 8.1e-111 404.8 475 50.7
vmacro04646 Vaccinium macrocarpon HOM05D003682 ORTHO05D004224 4.2e-107 392.5 481 47.8
Dinv44868 Davidia involucrata HOM05D003682 ORTHO05D004224 3.8e-100 369.4 477 47.4
Aqoxy5G01369 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 8.2e-95 351.7 478 45.4
TAR381G0824 Trochodendron aralioides HOM05D003682 ORTHO05D004224 1.4e-91 340.9 479 45.3
TAR625G0645 Trochodendron aralioides HOM05D003682 ORTHO05D004224 2.1e-90 337.0 479 44.1
PSO782G3450 Papaver somniferum HOM05D003682 ORTHO05D004224 5.1e-89 332.4 477 43.2
Lj4A600T32 Lonicera japonica HOM05D003682 ORTHO05D004224 3.3e-88 329.7 480 43.5
Haze_22471 Corylus avellana HOM05D003682 ORTHO05D004224 5.7e-88 328.9 462 45.2
QL09p017991 Quercus lobata HOM05D003682 ORTHO05D004224 3.7e-87 326.2 479 43.2
Lj4A739G25 Lonicera japonica HOM05D003682 ORTHO05D004224 4.8e-87 325.9 480 42.3
Lj4A589T43 Lonicera japonica HOM05D003682 ORTHO05D004224 1.8e-86 323.9 480 43.5
FAN04G1105 Fragaria x ananassa HOM05D003682 ORTHO05D004224 3.1e-86 323.2 449 45.0
Peaxi162Scf00454g00225 Petunia axillaris HOM05D003682 ORTHO05D004224 3.4e-85 319.7 460 42.2
PSO170G3281 Papaver somniferum HOM05D003682 ORTHO05D004224 2.2e-84 317.0 477 41.9
CiPaw.08G056300 Carya illinoinensis HOM05D003682 ORTHO05D004224 3.6e-82 309.7 478 42.7
Ciclev10000458m.g Citrus clementina HOM05D003682 ORTHO05D004224 3.9e-81 306.2 476 41.8
HPP92_013453 Vanilla planifolia HOM05D003682 ORTHO05D004224 1.1e-80 304.7 473 39.5
Potri.006G225100 Populus trichocarpa HOM05D003682 ORTHO05D004224 1.5e-80 304.3 473 41.0
FAN08G1971 Fragaria x ananassa HOM05D003682 ORTHO05D004224 2.0e-80 303.9 529 38.8
Sabra06G0174000 Salix brachista HOM05D003682 ORTHO05D004224 5.3e-78 295.8 472 39.4
Solyc04g076430.3 Solanum lycopersicum HOM05D003682 ORTHO05D004224 3.5e-77 293.1 480 38.1
CANSAT80G0637 Cannabis sativa HOM05D003682 ORTHO05D004224 5.9e-77 292.4 476 39.3
Thecc.08G072000 Theobroma cacao HOM05D003682 ORTHO05D004224 7.7e-77 292.0 476 40.3
PGSC0003DMG400009355 Solanum tuberosum HOM05D003682 ORTHO05D004224 1.3e-76 291.2 480 38.3
MBI16_g12477_MAGBIO Magnolia biondii HOM05D003682 ORTHO05D004224 1.7e-76 290.8 481 40.5
Sopen04g030190 Solanum pennellii HOM05D003682 ORTHO05D004224 3.8e-76 289.7 480 37.9
Manes.05G189900 Manihot esculenta HOM05D003682 ORTHO05D004224 1.9e-75 287.3 475 38.1
DCAR_019320 Daucus carota HOM05D003682 ORTHO05D004224 4.7e-74 282.7 484 39.7
Gohir.D04G010200 Gossypium hirsutum HOM05D003682 ORTHO05D004224 4.7e-74 282.7 472 39.2
MD15G1387100 Malus domestica HOM05D003682 ORTHO05D004224 6.1e-74 282.3 479 38.0
FAN13G2001 Fragaria x ananassa HOM05D003682 ORTHO05D004224 1.0e-73 281.6 474 39.5
Gorai.012G012000 Gossypium raimondii HOM05D003682 ORTHO05D004224 1.4e-73 281.2 474 39.0
Nitab4.5_0006151g0030 Nicotiana tabacum HOM05D003682 ORTHO05D004224 3.0e-73 280.0 480 37.5
TWI38G0994 Tripterygium wilfordii HOM05D003682 ORTHO05D004224 3.9e-73 279.6 483 39.1
CAN.G475.14 Capsicum annuum HOM05D003682 ORTHO05D004224 6.7e-73 278.9 480 37.5
FAN18G1070 Fragaria x ananassa HOM05D003682 ORTHO05D004224 8.8e-73 278.5 478 39.3
RcHm_v2.0_Chr7g0236311 Rosa chinensis HOM05D003682 ORTHO05D004224 1.5e-72 277.7 480 40.4
FvH4_5g35190 Fragaria vesca HOM05D003682 ORTHO05D004224 2.0e-72 277.3 478 39.7
Gohir.A05G405400 Gossypium hirsutum HOM05D003682 ORTHO05D004224 4.4e-72 276.2 476 38.7
MELO3C007092.2 Cucumis melo HOM05D003682 ORTHO05D004224 5.7e-72 275.8 474 39.9
Nitab4.5_0000131g0160 Nicotiana tabacum HOM05D003682 ORTHO05D004224 5.7e-72 275.8 480 37.1
Gohir.A06G031900 Gossypium hirsutum HOM05D003682 ORTHO05D004224 9.7e-72 275.0 476 38.7
Duzib093G1710 Durio zibethinus HOM05D003682 ORTHO05D004224 8.2e-71 271.9 478 38.9
MD08G1200000 Malus domestica HOM05D003682 ORTHO05D004224 1.4e-70 271.2 329 47.1
Prupe.1G533400 Prunus persica HOM05D003682 ORTHO05D004224 5.3e-70 269.2 321 48.3
Gohir.D06G031000 Gossypium hirsutum HOM05D003682 ORTHO05D004224 1.2e-69 268.1 476 37.6
Sed0002040 Sechium edule HOM05D003682 ORTHO05D004224 1.2e-69 268.1 475 40.0
Gorai.010G034200 Gossypium raimondii HOM05D003682 ORTHO05D004224 1.6e-69 267.7 476 37.6
Nn5g27243 Nelumbo nucifera HOM05D003682 ORTHO05D004224 1.6e-69 267.7 475 39.8
Cc10_g15970 Coffea canephora HOM05D003682 ORTHO05D004224 2.0e-69 267.3 476 38.9
CsaV3_6G052200 Cucumis sativus L. HOM05D003682 ORTHO05D004224 7.7e-69 265.4 474 39.0
ClCG11G014620 Citrullus lanatus HOM05D003682 ORTHO05D004224 5.0e-68 262.7 476 38.9
Sed0007462 Sechium edule HOM05D003682 ORTHO05D004224 1.5e-67 261.2 474 39.2
Lalb_Chr17g0344591 Lupinus albus HOM05D003682 ORTHO05D004224 5.5e-67 259.2 475 38.5
AUR62042881 Chenopodium quinoa HOM05D003682 ORTHO05D004224 1.6e-66 257.7 472 36.7
Ca_16009_v3 Cicer arietinum L. HOM05D003682 ORTHO05D004224 2.3e-65 253.8 468 36.1
Lsat_1_v5_gn_6_106460 Lactuca sativa HOM05D003682 ORTHO05D004224 4.0e-65 253.1 479 36.7
arahy.Tifrunner.gnm1.ann1.X4VYGK Arachis hypogaea HOM05D003682 ORTHO05D004224 5.2e-65 252.7 475 37.1
arahy.Tifrunner.gnm1.ann1.6QC2QS Arachis hypogaea HOM05D003682 ORTHO05D004224 1.2e-64 251.5 475 37.3
Lj1g0007093 Lotus japonicus HOM05D003682 ORTHO05D004224 3.4e-64 250.0 471 37.8
Os06g0677500 Oryza sativa ssp. japonica HOM05D003682 ORTHO05D004224 4.4e-64 249.6 476 37.2
EL10Ac6g13977 Beta vulgaris HOM05D003682 ORTHO05D004224 9.8e-64 248.4 509 34.0
Oeu025829.1 Olea europaea HOM05D003682 ORTHO05D004224 1.3e-63 248.1 478 36.6
Migut.D00421 Erythranthe guttata HOM05D003682 ORTHO05D004224 2.8e-63 246.9 481 36.2
Prupe.1G572600 Prunus persica HOM05D003682 ORTHO05D004224 2.8e-63 246.9 417 37.9
Atru.chr13.999 Acer truncatum HOM05D003682 ORTHO05D004224 4.8e-63 246.1 435 39.1
Phvul.009G036000 Phaseolus vulgaris HOM05D003682 ORTHO05D004224 4.8e-63 246.1 466 35.2
SalBow4G2331 Salvia bowleyana HOM05D003682 ORTHO05D004224 6.3e-63 245.7 485 35.9
Zm00001eb224710 Zea mays HOM05D003682 ORTHO05D004224 6.3e-63 245.7 472 37.7
Glyma.06G097500 Glycine max HOM05D003682 ORTHO05D004224 8.3e-63 245.4 468 35.7
Sc26g0002240 Simmondsia chinensis HOM05D003682 ORTHO05D004224 5.4e-62 242.7 475 35.2
Glyma.04G095800 Glycine max HOM05D003682 ORTHO05D004224 2.0e-61 240.7 467 34.9
AT5G41820 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 3.5e-61 240.0 480 37.5
VMungo1309G2518 Vigna mungo HOM05D003682 ORTHO05D004224 3.5e-61 240.0 466 34.1
Medtr3g100110 Medicago truncatula HOM05D003682 ORTHO05D004224 2.2e-60 237.3 464 34.9
AL3G20810 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 2.9e-60 236.9 465 37.4
HanXRQChr10g0277791 Helianthus annuus HOM05D003682 ORTHO05D004224 6.5e-60 235.7 479 36.5
PGR042G1797 Punica granatum HOM05D003682 ORTHO05D004224 1.1e-59 235.0 475 35.8
Oeu060952.2 Olea europaea HOM05D003682 ORTHO05D004224 3.2e-59 233.4 479 34.9
ECA246G3230 Erigeron canadensis HOM05D003682 ORTHO05D004224 4.2e-59 233.0 481 37.2
Eucgr.F00427 Eucalyptus grandis HOM05D003682 ORTHO05D004224 8.0e-58 228.8 477 35.2
Psat7g218480 Pisum sativum HOM05D003682 ORTHO05D004224 2.6e-56 223.8 467 33.4
Thhalv10024594m.g Eutrema salsugineum HOM05D003682 ORTHO05D004224 1.3e-55 221.5 485 35.7
Zm00001eb273870 Zea mays HOM05D003682 ORTHO05D004224 1.8e-54 217.6 471 34.4
SGA_v2.0_scaffold1G00611 Striga asiatica HOM05D003682 ORTHO05D004224 5.4e-54 216.1 477 34.0
TPR.G6373 Trifolium pratense HOM05D003682 ORTHO05D004224 5.9e-53 212.6 464 32.5
BolC7t45853H Brassica oleracea HOM05D003682 ORTHO05D004224 1.3e-52 211.5 461 36.0
AUR62037113 Chenopodium quinoa HOM05D003682 ORTHO05D004224 2.3e-52 210.7 323 41.8
Aa31LG4G9590 Aethionema arabicum HOM05D003682 ORTHO05D004224 5.0e-52 209.5 466 34.8
BolC1t01908H Brassica oleracea HOM05D003682 ORTHO05D004224 5.0e-52 209.5 467 36.0
A03p55320 Brassica napus HOM05D003682 ORTHO05D004224 6.6e-52 209.1 462 36.1
BraA03t14591Z Brassica rapa HOM05D003682 ORTHO05D004224 6.6e-52 209.1 467 36.0
BcaC06g32881 Brassica carinata HOM05D003682 ORTHO05D004224 8.6e-52 208.8 461 36.0
C07p53610 Brassica napus HOM05D003682 ORTHO05D004224 3.3e-51 206.8 459 35.7
Sp7g22480 Schrenkiella parvula HOM05D003682 ORTHO05D004224 5.5e-51 206.1 465 35.5
C01p19800 Brassica napus HOM05D003682 ORTHO05D004224 1.2e-50 204.9 467 35.5
CARHR231880 Cardamine hirsuta HOM05D003682 ORTHO05D004224 1.6e-50 204.5 465 34.6
BcaC09g50863 Brassica carinata HOM05D003682 ORTHO05D004224 2.1e-50 204.1 467 35.8
Carub.0007s1658 Capsella rubella HOM05D003682 ORTHO05D004224 3.6e-50 203.4 468 34.8
BraA01t01520Z Brassica rapa HOM05D003682 ORTHO05D004224 4.0e-49 199.9 468 35.3
AL7G47420 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 6.8e-49 199.1 482 34.0
THA.LOC104804716 Tarenaya hassleriana HOM05D003682 ORTHO05D000002 2.0e-48 197.6 474 32.7
CDE02G0915 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 3.4e-48 196.8 462 33.3
ATR0767G054 Amborella trichopoda HOM05D003682 ORTHO05D004224 7.5e-48 195.7 502 30.9
AL7G28730 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 1.3e-47 194.9 467 33.4
A01p15860 Brassica napus HOM05D003682 ORTHO05D004224 6.3e-47 192.6 468 34.6
AT4G24490 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 1.2e-45 188.3 468 33.3
Glyma.02G123302 Glycine max HOM05D003682 ORTHO05D004224 1.2e-42 178.3 284 37.7
CDE01G0832 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 3.6e-42 176.8 459 32.0
HanXRQChr08g0233491 Helianthus annuus HOM05D003682 ORTHO05D004224 8.0e-42 175.6 409 33.0
Carub.0003s1254 Capsella rubella HOM05D003682 ORTHO05D004224 1.4e-41 174.9 467 31.9
Hund17277 Selenicereus undatus HOM05D003682 ORTHO05D004224 5.2e-41 172.9 474 30.0
SHI09562 Sapria himalayana HOM05D003682 ORTHO05D000023 2.3e-36 157.5 333 36.9
SEGI_28473 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 2.8e-34 150.6 476 29.4
AagrBONN_evm.TU.Sc2ySwM_117.1254 Anthoceros agrestis HOM05D003682 ORTHO05D004224 5.8e-32 142.9 216 39.8
Dinv42603 Davidia involucrata HOM05D003682 ORTHO05D004224 1.1e-27 128.6 99 68.7
Lalb_Chr04g0252801 Lupinus albus HOM05D003682 ORTHO05D004224 2.1e-26 124.4 232 35.8
SEGI_15297 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 2.2e-23 114.4 324 30.2
GSVIVG01009191001 Vitis vinifera HOM05D003682 ORTHO05D004224 1.4e-22 111.7 126 54.0
Pp3c1_10430 Physcomitrium patens HOM05D003682 ORTHO05D004224 9.2e-22 109.0 396 29.5
CBR_g19613 Chara braunii HOM05D003682 ORTHO05D004224 1.2e-21 108.6 348 25.9
SEGI_02938 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 1.6e-21 108.2 92 58.7
SEGI_19039 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 1.6e-21 108.2 92 58.7
Mapoly0151s0003 Marchantia polymorpha HOM05D003682 ORTHO05D004224 7.8e-21 105.9 472 24.6
Cpa.g.c39765 Carica papaya HOM05D003682 ORTHO05D004224 7.3e-19 99.4 141 46.1
BcaNung04806 Brassica carinata HOM05D003682 ORTHO05D004224 1.6e-18 98.2 125 43.2
ECA232G1558 Erigeron canadensis HOM05D003682 ORTHO05D004224 3.1e-17 94.0 177 33.9
Cpa.g.c34457.1 Carica papaya HOM05D003682 ORTHO05D004224 4.4e-16 90.1 146 37.7
Psat5g049320 Pisum sativum HOM05D003682 ORTHO05D004224 7.6e-16 89.4 157 38.9
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 3.2e-14 84.0 73 56.2
GSVIVG01009190001 Vitis vinifera HOM05D003682 ORTHO05D004224 3.2e-14 84.0 217 31.8
BcaB06g27567 Brassica carinata HOM05D003682 ORTHO05D004224 7.1e-14 82.8 128 38.3
unitig_0.g155 Utricularia gibba HOM05D003682 ORTHO05D004224 3.5e-13 80.5 79 51.9
COL.COLO4_35257 Corchorus olitorius HOM05D003682 ORTHO05D004224 6.0e-13 79.7 100 46.0
HPP92_013470 Vanilla planifolia HOM05D003682 ORTHO05D004224 7.8e-13 79.3 94 50.0
SEGI_17476 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 1.3e-12 78.6 236 29.7
PRCOL_00003254 Prasinoderma coloniale HOM05D003682 ORTHO05D004224 2.3e-12 77.8 185 31.4
TAR628G0387 Trochodendron aralioides HOM05D003682 ORTHO05D004224 3.9e-12 77.0 55 67.3
PGR102G2117 Punica granatum HOM05D003682 ORTHO05D004224 5.1e-12 76.6 69 60.9
SEGI_24080 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 7.3e-11 72.8 73 49.3
CSS0005132 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.6e-10 70.5 54 66.7
MCO12G062 Micromonas commoda HOM05D003682 ORTHO05D004224 1.1e-09 68.9 131 33.6
SHI09561 Sapria himalayana HOM05D000105 ORTHO05D000023 5.3e-09 66.6 77 41.6
SMO307G0051 Selaginella moellendorffii HOM05D003682 ORTHO05D004224 2.6e-08 64.3 73 45.2
Actinidia36898 Actinidia chinensis HOM05D003682 ORTHO05D004224 3.4e-08 63.9 79 45.6
CSS0023594 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 4.4e-08 63.5 35 85.7
Nn1g05594 Nelumbo nucifera HOM05D003682 ORTHO05D004224 3.8e-07 60.5 90 42.2
HanXRQChr11g0332681 Helianthus annuus HOM05D003682 ORTHO05D004224 4.2e-06 57.0 52 59.6

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (3 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (3 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (3 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (3 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (2 genes)
Punica granatum (2 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (6 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (2 genes)

Program Settings