Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 7.3e-196 687.2 384 100.0
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 8.6e-189 663.7 385 94.8
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 1.1e-138 497.3 381 69.6
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 5.9e-137 491.5 385 69.4
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 9.7e-132 474.2 367 69.8
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 3.0e-125 452.6 386 64.5
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 1.1e-124 450.7 389 63.8
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 3.3e-124 449.1 379 65.4
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 1.7e-123 446.8 420 61.2
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 4.1e-122 442.2 370 64.3
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 7.0e-122 441.4 376 62.8
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 4.5e-121 438.7 380 63.7
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 1.0e-120 437.6 385 63.9
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 1.9e-119 433.3 399 61.2
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 2.5e-119 433.0 385 61.0
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 9.4e-119 431.0 386 60.4
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 6.1e-118 428.3 371 62.3
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 1.3e-115 420.6 387 61.0
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 1.8e-114 416.8 389 59.4
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 3.1e-114 416.0 418 57.9
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 4.1e-114 415.6 392 58.9
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 4.1e-114 415.6 389 58.6
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 5.9e-113 411.8 385 59.7
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 3.8e-112 409.1 378 60.8
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 3.2e-111 406.0 394 57.6
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 3.6e-110 402.5 384 59.1
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 2.3e-109 399.8 397 56.7
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 2.0e-108 396.7 384 57.0
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 3.4e-108 396.0 386 56.7
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 2.2e-107 393.3 364 59.6
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 4.9e-107 392.1 386 56.2
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 1.4e-106 390.6 375 58.1
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 1.8e-106 390.2 372 58.3
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 2.4e-106 389.8 369 59.1
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 3.1e-106 389.4 384 56.5
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 7.0e-106 388.3 374 56.1
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 2.7e-105 386.3 370 58.9
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 4.5e-105 385.6 385 56.1
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 3.8e-104 382.5 329 62.0
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 6.1e-102 375.2 387 56.6
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 6.8e-101 371.7 360 56.9
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 6.8e-101 371.7 368 55.4
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 2.6e-100 369.8 376 56.4
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 1.3e-99 367.5 359 64.9
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 5.4e-98 362.1 386 53.9
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 9.2e-98 361.3 326 58.0
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 1.3e-96 357.5 334 60.2
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 1.3e-96 357.5 481 47.2
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 3.9e-96 355.9 382 50.5
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 3.9e-96 355.9 382 50.5
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 3.9e-96 355.9 386 53.1
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 2.5e-95 353.2 315 60.0
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 2.5e-95 353.2 374 54.8
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 5.6e-95 352.1 372 56.7
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 1.2e-94 350.9 375 51.7
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 8.0e-94 348.2 413 48.7
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 6.8e-93 345.1 445 47.4
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 4.4e-92 342.4 356 55.1
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 4.4e-92 342.4 384 49.0
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 9.8e-92 341.3 395 50.4
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 3.7e-91 339.3 392 49.2
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 8.3e-91 338.2 380 50.3
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 1.4e-90 337.4 378 49.5
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 1.9e-90 337.0 372 51.9
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 2.4e-90 336.7 394 53.8
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 2.0e-89 333.6 394 50.5
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 1.0e-88 331.3 384 49.0
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 1.0e-88 331.3 371 49.3
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.0e-88 331.3 370 53.0
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 1.7e-88 330.5 323 56.3
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 4.3e-87 325.9 330 52.4
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 1.6e-86 323.9 349 53.6
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 3.6e-86 322.8 424 44.1
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 4.0e-85 319.3 390 51.5
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 4.0e-85 319.3 298 56.7
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 2.9e-83 313.2 406 45.1
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 6.4e-83 312.0 382 45.3
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 8.3e-83 311.6 324 53.1
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 8.3e-83 311.6 381 46.5
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 1.4e-82 310.8 299 57.9
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 2.1e-81 307.0 383 46.2
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 2.1e-81 307.0 394 45.2
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 3.3e-79 299.7 321 52.6
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 7.3e-79 298.5 325 49.2
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 8.9e-77 291.6 331 50.8
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 8.9e-77 291.6 331 50.8
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 3.4e-76 289.7 384 45.3
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 3.4e-76 289.7 446 40.8
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 2.5e-71 273.5 419 47.5
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 5.6e-71 272.3 331 47.4
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 5.4e-66 255.8 181 68.5
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 7.3e-63 245.4 304 48.0
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 3.4e-60 236.5 384 40.6
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 4.5e-60 236.1 173 68.2
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 6.4e-59 232.3 377 40.3
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 4.2e-58 229.6 164 68.3
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 3.6e-54 216.5 255 48.6
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 6.2e-54 215.7 148 72.3
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 1.2e-41 174.9 314 39.8
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 5.7e-39 166.0 169 54.4
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 1.1e-37 161.8 183 59.0
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 7.2e-34 149.1 121 63.6
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 5.9e-28 129.4 91 73.6
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 5.9e-28 129.4 91 73.6
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 8.5e-19 99.0 111 51.4
SHI02845 Sapria himalayana HOM05D007038 ORTHO05D008893 1.9e-18 97.8 162 41.4
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 5.2e-16 89.7 169 34.9
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 1.1e-15 88.6 166 36.7
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 9.7e-15 85.5 296 25.3
Mapoly0056s0109 Marchantia polymorpha HOM05D007038 ORTHO05D008893 1.4e-08 65.1 213 24.9
Ah.14g084570 Amaranthus hybridus HOM05D007038 ORTHO05D008893 3.3e-07 60.5 59 52.5
HPP92_020432 Vanilla planifolia HOM05D000367 ORTHO05D008893 4.4e-07 60.1 94 44.7

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (0 genes)
Corylus avellana (1 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings