Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012701 Camellia sinensis var. sinensis HOM05D004797 ORTHO05D005752 5.4e-199 697.6 382 100.0
CSS0044227 Camellia sinensis var. sinensis HOM05D004797 ORTHO05D005752 3.8e-168 595.1 408 84.6
Nn7g36315 Nelumbo nucifera HOM05D004797 ORTHO05D005752 1.2e-121 440.7 346 65.3
GSVIVG01025234001 Vitis vinifera HOM05D004797 ORTHO05D005752 1.2e-121 440.7 279 74.2
TAR633G1546 Trochodendron aralioides HOM05D004797 ORTHO05D005752 8.5e-120 434.5 279 73.5
Rhsim01G0192400 Rhododendron simsii HOM05D004797 ORTHO05D005752 2.5e-119 433.0 380 61.1
Gohir.A09G112900 Gossypium hirsutum HOM05D004797 ORTHO05D005752 3.2e-119 432.6 279 72.8
Manes.14G004000 Manihot esculenta HOM05D004797 ORTHO05D005752 9.4e-119 431.0 279 72.8
Gohir.D09G109400 Gossypium hirsutum HOM05D004797 ORTHO05D005752 1.6e-118 430.3 279 72.8
Gorai.006G127000 Gossypium raimondii HOM05D004797 ORTHO05D005752 1.6e-118 430.3 279 72.8
CANSAT54G0946 Cannabis sativa HOM05D004797 ORTHO05D005752 4.7e-118 428.7 277 71.8
Atru.chr3.2667 Acer truncatum HOM05D004797 ORTHO05D005752 6.1e-118 428.3 279 71.3
Ciclev10014796m.g Citrus clementina HOM05D004797 ORTHO05D005752 6.1e-118 428.3 279 71.7
Dinv36236 Davidia involucrata HOM05D004797 ORTHO05D005752 1.0e-117 427.6 272 74.3
Eucgr.J00747 Eucalyptus grandis HOM05D004797 ORTHO05D005752 1.0e-117 427.6 281 71.2
Cpa.g.sc84.33 Carica papaya HOM05D004797 ORTHO05D005752 1.4e-117 427.2 276 72.1
Nn2g15211 Nelumbo nucifera HOM05D004797 ORTHO05D005752 1.4e-117 427.2 338 64.2
Dinv22162 Davidia involucrata HOM05D004797 ORTHO05D005752 2.3e-117 426.4 411 56.4
Potri.009G051400 Populus trichocarpa HOM05D004797 ORTHO05D005752 5.1e-117 425.2 279 71.7
Thecc.09G237700 Theobroma cacao HOM05D004797 ORTHO05D005752 1.5e-116 423.7 279 72.0
Potri.001G256000 Populus trichocarpa HOM05D004797 ORTHO05D005752 2.6e-116 422.9 279 70.6
COL.COLO4_28767 Corchorus olitorius HOM05D004797 ORTHO05D005752 3.3e-116 422.5 277 72.6
Duzib170G0427 Durio zibethinus HOM05D004797 ORTHO05D005752 7.4e-116 421.4 277 71.5
CiPaw.14G117300 Carya illinoinensis HOM05D004797 ORTHO05D005752 1.3e-115 420.6 279 71.3
Actinidia16344 Actinidia chinensis HOM05D004797 ORTHO05D005752 1.7e-115 420.2 260 75.8
Peaxi162Scf00004g00318 Petunia axillaris HOM05D004797 ORTHO05D005752 2.2e-115 419.9 277 70.8
Actinidia11672 Actinidia chinensis HOM05D004797 ORTHO05D005752 2.8e-115 419.5 271 72.3
THA.LOC104817914 Tarenaya hassleriana HOM05D004797 ORTHO05D005752 6.3e-115 418.3 277 70.4
Glyma.12G020200 Glycine max HOM05D004797 ORTHO05D005752 1.4e-114 417.2 262 73.7
RcHm_v2.0_Chr5g0052831 Rosa chinensis HOM05D004797 ORTHO05D005752 1.8e-114 416.8 303 65.0
TAR623G0783 Trochodendron aralioides HOM05D004797 ORTHO05D005752 1.8e-114 416.8 279 71.0
Lsat_1_v5_gn_1_77340 Lactuca sativa HOM05D004797 ORTHO05D005752 2.4e-114 416.4 273 71.8
Prupe.4G254200 Prunus persica HOM05D004797 ORTHO05D005752 3.1e-114 416.0 264 73.5
arahy.Tifrunner.gnm1.ann1.BIMS8G Arachis hypogaea HOM05D004797 ORTHO05D005752 2.0e-113 413.3 262 72.9
arahy.Tifrunner.gnm1.ann1.IKU8UZ Arachis hypogaea HOM05D004797 ORTHO05D005752 2.0e-113 413.3 262 72.9
SGA_v2.0_scaffold42G16076 Striga asiatica HOM05D004797 ORTHO05D005752 2.0e-113 413.3 356 60.4
Lalb_Chr03g0024481 Lupinus albus HOM05D004797 ORTHO05D005752 4.5e-113 412.1 262 71.0
EL10Ac4g10215 Beta vulgaris HOM05D004797 ORTHO05D005752 5.9e-113 411.8 263 71.9
MD03G1172400 Malus domestica HOM05D004797 ORTHO05D005752 7.7e-113 411.4 265 72.8
MELO3C015173.2 Cucumis melo HOM05D004797 ORTHO05D005752 1.0e-112 411.0 261 73.6
AUR62000146 Chenopodium quinoa HOM05D004797 ORTHO05D005752 1.7e-112 410.2 350 58.3
AUR62019327 Chenopodium quinoa HOM05D004797 ORTHO05D005752 1.7e-112 410.2 263 71.9
Oeu025884.1 Olea europaea HOM05D004797 ORTHO05D005752 1.7e-112 410.2 271 72.0
ClCG03G013100 Citrullus lanatus HOM05D004797 ORTHO05D005752 2.2e-112 409.8 261 73.2
CsaV3_1G042960 Cucumis sativus L. HOM05D004797 ORTHO05D005752 6.5e-112 408.3 261 72.8
Glyma.11G093700 Glycine max HOM05D004797 ORTHO05D005752 6.5e-112 408.3 262 72.1
MD11G1190300 Malus domestica HOM05D004797 ORTHO05D005752 6.5e-112 408.3 264 72.7
Ah.06g193930 Amaranthus hybridus HOM05D004797 ORTHO05D005752 1.1e-111 407.5 261 72.0
Sabra09G0037500 Salix brachista HOM05D004797 ORTHO05D005752 1.1e-111 407.5 302 65.6
Sed0009811 Sechium edule HOM05D004797 ORTHO05D005752 1.1e-111 407.5 347 61.4
VMungo1127G0838 Vigna mungo HOM05D004797 ORTHO05D005752 1.5e-111 407.1 263 72.2
Hund22004 Selenicereus undatus HOM05D004797 ORTHO05D005752 1.9e-111 406.8 346 60.1
MSTRG.12462 Avicennia marina HOM05D004797 ORTHO05D005752 2.5e-111 406.4 368 57.9
Phvul.011G022800 Phaseolus vulgaris HOM05D004797 ORTHO05D005752 2.5e-111 406.4 269 70.6
TWI60G0872 Tripterygium wilfordii HOM05D004797 ORTHO05D005752 3.2e-111 406.0 357 58.5
vmacro14270 Vaccinium macrocarpon HOM05D004797 ORTHO05D005752 3.2e-111 406.0 380 57.4
Nitab4.5_0006617g0070 Nicotiana tabacum HOM05D004797 ORTHO05D005752 5.5e-111 405.2 265 70.2
Solyc11g065370.3 Solanum lycopersicum HOM05D004797 ORTHO05D005752 7.2e-111 404.8 269 69.1
Lj3g0024081 Lotus japonicus HOM05D004797 ORTHO05D005752 1.2e-110 404.1 259 71.8
Nitab4.5_0002451g0050 Nicotiana tabacum HOM05D004797 ORTHO05D005752 1.2e-110 404.1 268 69.8
Hma1.2p1_2280F.1_g318720 Hydrangea macrophylla HOM05D004797 ORTHO05D005752 2.7e-110 402.9 271 70.8
HPP92_012324 Vanilla planifolia HOM05D004797 ORTHO05D005752 2.7e-110 402.9 274 68.6
Aa31LG10G3600 Aethionema arabicum HOM05D004797 ORTHO05D005752 3.6e-110 402.5 323 60.1
Aqoxy2G00222 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 8.0e-110 401.4 351 57.5
TWI32G1158 Tripterygium wilfordii HOM05D004797 ORTHO05D005752 1.0e-109 401.0 361 58.7
Carub.0001s4032 Capsella rubella HOM05D004797 ORTHO05D005752 1.8e-109 400.2 277 66.8
HanXRQChr01g0023561 Helianthus annuus HOM05D004797 ORTHO05D005752 1.8e-109 400.2 256 73.4
Lalb_Chr01g0001051 Lupinus albus HOM05D004797 ORTHO05D005752 2.3e-109 399.8 263 69.6
MSTRG.18441 Avicennia marina HOM05D004797 ORTHO05D005752 3.0e-109 399.4 281 67.3
CAN.G717.4 Capsicum annuum HOM05D004797 ORTHO05D005752 3.0e-109 399.4 263 70.3
DCAR_029965 Daucus carota HOM05D004797 ORTHO05D005752 3.0e-109 399.4 281 67.6
PGSC0003DMG400029996 Solanum tuberosum HOM05D004797 ORTHO05D005752 1.1e-108 397.5 265 69.1
FAN21G1390 Fragaria x ananassa HOM05D004797 ORTHO05D005752 1.5e-108 397.1 281 66.5
Medtr4g076980 Medicago truncatula HOM05D004797 ORTHO05D005752 2.0e-108 396.7 259 69.9
vmacro04134 Vaccinium macrocarpon HOM05D004797 ORTHO05D005752 2.6e-108 396.4 388 59.8
FAN11G3886 Fragaria x ananassa HOM05D004797 ORTHO05D005752 3.3e-108 396.0 268 68.3
Sopen11g025150 Solanum pennellii HOM05D004797 ORTHO05D005752 4.4e-108 395.6 265 68.7
Migut.D00622 Erythranthe guttata HOM05D004797 ORTHO05D005752 5.7e-108 395.2 283 66.4
TPR.G13744 Trifolium pratense HOM05D004797 ORTHO05D005752 7.4e-108 394.8 259 69.5
FAN16G3639 Fragaria x ananassa HOM05D004797 ORTHO05D005752 1.7e-107 393.7 281 66.5
Thhalv10011431m.g Eutrema salsugineum HOM05D004797 ORTHO05D005752 2.2e-107 393.3 277 66.1
MBI19_g09239_MAGBIO Magnolia biondii HOM05D004797 ORTHO05D005752 2.2e-107 393.3 281 67.3
AL1G59340 Arabidopsis lyrata HOM05D004797 ORTHO05D005752 2.8e-107 392.9 277 65.7
Sp1g38120 Schrenkiella parvula HOM05D004797 ORTHO05D005752 1.4e-106 390.6 277 65.7
AT1G51450 Arabidopsis thaliana HOM05D004797 ORTHO05D005752 7.0e-106 388.3 277 65.0
ECA248G3299 Erigeron canadensis HOM05D004797 ORTHO05D005752 7.0e-106 388.3 350 57.7
Hund07473 Selenicereus undatus HOM05D004797 ORTHO05D005752 9.1e-106 387.9 360 53.6
BcaB07g33593 Brassica carinata HOM05D004797 ORTHO05D005752 4.5e-105 385.6 268 67.5
CARHR041620 Cardamine hirsuta HOM05D004797 ORTHO05D005752 4.5e-105 385.6 277 63.9
MBI17_g23181_MAGBIO Magnolia biondii HOM05D004797 ORTHO05D005752 2.9e-104 382.9 263 67.7
PSO384G3237 Papaver somniferum HOM05D004797 ORTHO05D005752 2.9e-104 382.9 268 69.4
SalBow8G4383 Salvia bowleyana HOM05D004797 ORTHO05D005752 2.9e-104 382.9 263 68.4
Rhsim13G0218000 Rhododendron simsii HOM05D004797 ORTHO05D005752 5.0e-104 382.1 388 52.8
Lj1A320G11 Lonicera japonica HOM05D004797 ORTHO05D005752 8.5e-104 381.3 240 74.2
Aqoxy1G00230 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 1.9e-103 380.2 311 60.8
C06p06610 Brassica napus HOM05D004797 ORTHO05D005752 1.9e-103 380.2 278 64.7
ATR0733G130 Amborella trichopoda HOM05D004797 ORTHO05D005752 2.5e-103 379.8 315 59.0
PGR142G0717 Punica granatum HOM05D004797 ORTHO05D005752 4.2e-103 379.0 280 66.4
BcaC08g43313 Brassica carinata HOM05D004797 ORTHO05D005752 5.5e-103 378.6 278 64.7
PSO339G1463 Papaver somniferum HOM05D004797 ORTHO05D005752 1.2e-102 377.5 267 68.9
Cfa009790 Carpinus fangiana HOM05D004797 ORTHO05D005752 3.6e-102 375.9 240 72.9
BolC6t35774H Brassica oleracea HOM05D004797 ORTHO05D005752 6.1e-102 375.2 280 64.3
Eucgr.B03708 Eucalyptus grandis HOM05D004797 ORTHO05D005752 8.0e-102 374.8 262 67.9
A06p02480 Brassica napus HOM05D004797 ORTHO05D005752 4.4e-100 369.0 259 67.2
BraA06t23454Z Brassica rapa HOM05D004797 ORTHO05D005752 5.7e-100 368.6 260 66.9
CiPaw.13G156600 Carya illinoinensis HOM05D004797 ORTHO05D005752 5.7e-100 368.6 280 64.6
Migut.N02340 Erythranthe guttata HOM05D004797 ORTHO05D005752 2.4e-98 363.2 268 63.4
PSO339G4480 Papaver somniferum HOM05D004797 ORTHO05D005752 4.5e-97 359.0 260 65.4
Cc01_g04890 Coffea canephora HOM05D004797 ORTHO05D005752 1.0e-93 347.8 194 78.4
HPP92_012392 Vanilla planifolia HOM05D004797 ORTHO05D005752 1.8e-93 347.1 197 76.6
SHI29796 Sapria himalayana HOM05D004797 ORTHO05D005752 2.6e-92 343.2 276 61.2
unitig_27.g24997 Utricularia gibba HOM05D004797 ORTHO05D005752 9.8e-92 341.3 390 47.9
Sc16g0011300 Simmondsia chinensis HOM05D004797 ORTHO05D005752 2.2e-91 340.1 316 56.3
PGR119G1354 Punica granatum HOM05D004797 ORTHO05D005752 7.0e-90 335.1 230 68.3
CiPaw.13G157500 Carya illinoinensis HOM05D004797 ORTHO05D005752 3.8e-88 329.3 260 62.3
SEGI_00529 Sequoiadendron giganteum HOM05D004797 ORTHO05D005752 6.6e-88 328.6 285 57.5
QL01p004191 Quercus lobata HOM05D004797 ORTHO05D005752 1.9e-87 327.0 184 81.0
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 3.5e-81 306.2 322 51.9
Os11g0146500 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 1.5e-79 300.8 296 50.7
Os12g0143200 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 1.2e-78 297.7 347 46.4
Zm00001eb092900 Zea mays HOM05D004797 ORTHO05D005752 8.0e-78 295.0 327 45.6
AagrBONN_evm.TU.Sc2ySwM_228.213 Anthoceros agrestis HOM05D004797 ORTHO05D005752 7.3e-71 271.9 261 52.5
Actinidia23978 Actinidia chinensis HOM05D004797 ORTHO05D005752 3.1e-69 266.5 251 55.4
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 4.0e-69 266.2 247 51.4
Ca_18973_v3 Cicer arietinum L. HOM05D004797 ORTHO05D005752 8.3e-67 258.5 172 69.8
Ca_29677_v3 Cicer arietinum L. HOM05D004797 ORTHO05D005752 8.3e-67 258.5 172 69.8
Psat7g172280 Pisum sativum HOM05D004797 ORTHO05D005752 7.1e-66 255.4 173 67.1
Mapoly0036s0095 Marchantia polymorpha HOM05D004797 ORTHO05D005752 3.9e-64 249.6 230 54.8
Haze_23164 Corylus avellana HOM05D004797 ORTHO05D005752 3.3e-63 246.5 177 66.7
Pp3c12_10080 Physcomitrium patens HOM05D004797 ORTHO05D005752 1.2e-62 244.6 217 53.5
FvH4_3g28490 Fragaria vesca HOM05D004797 ORTHO05D005752 2.1e-62 243.8 179 64.2
Migut.L00817 Erythranthe guttata HOM05D004797 ORTHO05D005752 4.7e-62 242.7 183 63.9
Migut.L00239 Erythranthe guttata HOM05D004797 ORTHO05D005752 2.3e-61 240.4 214 56.1
CDE06G1612 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 1.4e-58 231.1 331 42.9
CDE02G2983 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 1.0e-56 224.9 248 53.2
CBR_g54630 Chara braunii HOM05D004797 ORTHO05D005752 1.1e-55 221.5 253 46.2
Pp3c23_9320 Physcomitrium patens HOM05D004797 ORTHO05D005752 1.5e-55 221.1 207 54.1
unitig_60.g25644 Utricularia gibba HOM05D004797 ORTHO05D005752 2.5e-55 220.3 276 46.4
CBR_g19286 Chara braunii HOM05D004797 ORTHO05D005752 2.9e-51 206.8 250 42.8
Os11g0145700 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 1.0e-48 198.4 225 45.8
Sed0024369 Sechium edule HOM05D004797 ORTHO05D005752 4.9e-43 179.5 217 47.9
Cre16.g670250 Chlamydomonas reinhardtii HOM05D004797 ORTHO05D005752 1.7e-40 171.0 223 42.6
CDE02G1762 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 1.9e-39 167.5 209 49.3
Zm00001eb380670 Zea mays HOM05D008064 ORTHO05D005752 1.9e-39 167.5 179 46.4
Aqoxy3G03849 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 2.1e-38 164.1 205 45.4
Aqoxy3G02211 Aquilegia oxysepala HOM05D004797 ORTHO05D004745 6.2e-38 162.5 201 45.8
PRCOL_00001849 Prasinoderma coloniale HOM05D004797 ORTHO05D005752 3.1e-37 160.2 249 37.3
Zm00001eb115730 Zea mays HOM05D004797 ORTHO05D005752 1.9e-34 151.0 118 59.3
Zm00001eb287480 Zea mays HOM05D004797 ORTHO05D005752 3.2e-34 150.2 114 58.8
CBR_g54627 Chara braunii HOM05D004797 ORTHO05D005752 9.3e-34 148.7 181 44.2
Psat7g172360 Pisum sativum HOM05D004797 ORTHO05D005752 1.6e-33 147.9 91 71.4
Migut.L00818 Erythranthe guttata HOM05D004797 ORTHO05D005752 5.6e-31 139.4 81 75.3
unitig_60.g25645 Utricularia gibba HOM05D004797 ORTHO05D005752 6.1e-17 92.8 54 77.8
QL06p032345 Quercus lobata HOM05D004797 ORTHO05D050637 5.1e-16 89.7 49 75.5
QL93p0275_0020 Quercus lobata HOM05D004797 ORTHO05D050637 5.1e-16 89.7 49 75.5
PRCOL_00002342 Prasinoderma coloniale HOM05D003906 ORTHO05D004776 4.8e-06 56.6 73 41.1

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (4 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (3 genes)
Ceratophyllum demersum (4 genes)
Chara braunii (3 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (5 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (2 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (3 genes)
Papaver somniferum (3 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (2 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (3 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (3 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (4 genes)

Program Settings