Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012548 Camellia sinensis var. sinensis HOM05D004526 ORTHO05D005548 1.3e-185 652.9 323 100.0
CSS0008092 Camellia sinensis var. sinensis HOM05D004526 ORTHO05D005548 7.3e-173 610.5 325 94.8
CSS0019571 Camellia sinensis var. sinensis HOM05D004526 ORTHO05D005548 6.7e-134 481.1 407 67.6
Dinv06512 Davidia involucrata HOM05D004526 ORTHO05D005548 4.5e-130 468.4 414 64.5
Dinv07025 Davidia involucrata HOM05D004526 ORTHO05D005548 8.7e-126 454.1 407 64.4
Nn3g17130 Nelumbo nucifera HOM05D004526 ORTHO05D005548 3.8e-121 438.7 408 61.0
Cfa007509 Carpinus fangiana HOM05D004526 ORTHO05D005548 1.9e-120 436.4 408 61.8
Actinidia06070 Actinidia chinensis HOM05D004526 ORTHO05D005548 5.5e-120 434.9 396 62.9
CiPaw.03G030200 Carya illinoinensis HOM05D004526 ORTHO05D005548 3.6e-119 432.2 408 61.0
Nitab4.5_0000157g0090 Nicotiana tabacum HOM05D004526 ORTHO05D005548 4.6e-119 431.8 407 59.2
CAN.G226.26 Capsicum annuum HOM05D004526 ORTHO05D005548 3.0e-118 429.1 407 58.7
Peaxi162Scf00345g00811 Petunia axillaris HOM05D004526 ORTHO05D005548 3.0e-118 429.1 407 59.5
PGSC0003DMG400030284 Solanum tuberosum HOM05D004526 ORTHO05D005548 3.0e-118 429.1 407 59.2
TAR481G0009 Trochodendron aralioides HOM05D004526 ORTHO05D005548 3.9e-118 428.7 408 60.5
CiPaw.04G020200 Carya illinoinensis HOM05D004526 ORTHO05D005548 5.1e-118 428.3 408 60.3
Cc08_g10980 Coffea canephora HOM05D004526 ORTHO05D005548 5.1e-118 428.3 403 60.3
GSVIVG01032607001 Vitis vinifera HOM05D004526 ORTHO05D005548 1.5e-117 426.8 408 60.3
Sopen01g004780 Solanum pennellii HOM05D004526 ORTHO05D005548 2.6e-117 426.0 407 58.7
Solyc01g009290.4 Solanum lycopersicum HOM05D004526 ORTHO05D005548 4.4e-117 425.2 407 58.5
Haze_14584 Corylus avellana HOM05D004526 ORTHO05D005548 5.7e-117 424.9 434 58.5
Lj7A401T78 Lonicera japonica HOM05D004526 ORTHO05D005548 5.7e-117 424.9 407 60.4
Gohir.D04G050600 Gossypium hirsutum HOM05D004526 ORTHO05D005548 2.2e-116 422.9 408 60.0
Gorai.012G056100 Gossypium raimondii HOM05D004526 ORTHO05D005548 2.2e-116 422.9 408 60.0
Potri.017G077200 Populus trichocarpa HOM05D004526 ORTHO05D005548 2.2e-116 422.9 404 58.9
Glyma.10G292700 Glycine max HOM05D004526 ORTHO05D005548 1.1e-115 420.6 408 59.1
Prupe.3G272100 Prunus persica HOM05D004526 ORTHO05D005548 1.1e-115 420.6 410 59.3
Glyma.20G242900 Glycine max HOM05D004526 ORTHO05D005548 1.8e-115 419.9 408 58.6
Manes.17G021000 Manihot esculenta HOM05D004526 ORTHO05D005548 1.8e-115 419.9 408 58.6
Gohir.A05G364100 Gossypium hirsutum HOM05D004526 ORTHO05D005548 2.4e-115 419.5 408 59.8
Thecc.04G074400 Theobroma cacao HOM05D004526 ORTHO05D005548 2.4e-115 419.5 408 59.6
DCAR_021672 Daucus carota HOM05D004526 ORTHO05D005548 4.1e-115 418.7 414 56.3
CsaV3_5G037880 Cucumis sativus L. HOM05D004526 ORTHO05D005548 5.3e-115 418.3 408 59.1
ClCG09G018400 Citrullus lanatus HOM05D004526 ORTHO05D005548 6.9e-115 417.9 409 58.7
MSTRG.1703 Avicennia marina HOM05D004526 ORTHO05D005548 1.5e-114 416.8 405 58.3
QL02p080561 Quercus lobata HOM05D004526 ORTHO05D005548 1.5e-114 416.8 408 59.1
Ca_11340_v3 Cicer arietinum L. HOM05D004526 ORTHO05D005548 2.6e-114 416.0 408 58.3
Duzib147G0459 Durio zibethinus HOM05D004526 ORTHO05D005548 3.4e-114 415.6 408 59.1
Oeu018626.2 Olea europaea HOM05D004526 ORTHO05D005548 5.9e-114 414.8 443 55.1
TWI60G0005 Tripterygium wilfordii HOM05D004526 ORTHO05D005548 1.0e-113 414.1 408 57.6
Hund13244 Selenicereus undatus HOM05D004526 ORTHO05D005548 1.3e-113 413.7 409 58.7
Sed0004091 Sechium edule HOM05D004526 ORTHO05D005548 1.7e-113 413.3 408 58.3
Ciclev10011737m.g Citrus clementina HOM05D004526 ORTHO05D005548 3.8e-113 412.1 408 58.6
Migut.E01591 Erythranthe guttata HOM05D004526 ORTHO05D005548 8.5e-113 411.0 405 57.0
Phvul.007G007300 Phaseolus vulgaris HOM05D004526 ORTHO05D005548 8.5e-113 411.0 408 56.9
RcHm_v2.0_Chr2g0169161 Rosa chinensis HOM05D004526 ORTHO05D005548 8.5e-113 411.0 410 56.1
COL.COLO4_25181 Corchorus olitorius HOM05D004526 ORTHO05D005548 1.1e-112 410.6 408 58.6
RhsimUnG0055200 Rhododendron simsii HOM05D004526 ORTHO05D005548 1.9e-112 409.8 407 58.0
EL10Ac2g02933 Beta vulgaris HOM05D004526 ORTHO05D005548 2.5e-112 409.5 409 57.5
PSO478G0915 Papaver somniferum HOM05D004526 ORTHO05D005548 2.5e-112 409.5 408 56.1
PSO591G0197 Papaver somniferum HOM05D004526 ORTHO05D005548 5.5e-112 408.3 408 56.6
PSO832G1140 Papaver somniferum HOM05D004526 ORTHO05D005548 5.5e-112 408.3 408 56.6
PGR142G4111 Punica granatum HOM05D004526 ORTHO05D005548 9.4e-112 407.5 408 57.4
PSO017G3834 Papaver somniferum HOM05D004526 ORTHO05D005548 1.2e-111 407.1 408 55.9
Psat6g239400 Pisum sativum HOM05D004526 ORTHO05D005548 2.7e-111 406.0 408 56.6
arahy.Tifrunner.gnm1.ann1.S1RF4U Arachis hypogaea HOM05D004526 ORTHO05D005548 1.0e-110 404.1 408 57.8
Aqoxy3G03268 Aquilegia oxysepala HOM05D004526 ORTHO05D005548 1.4e-110 403.7 408 57.8
Lalb_Chr21g0307111 Lupinus albus HOM05D004526 ORTHO05D005548 1.8e-110 403.3 408 56.4
PGR142G2860 Punica granatum HOM05D004526 ORTHO05D005548 2.3e-110 402.9 408 57.4
Atru.chr8.1914 Acer truncatum HOM05D004526 ORTHO05D005548 6.7e-110 401.4 410 55.9
arahy.Tifrunner.gnm1.ann1.31SG4H Arachis hypogaea HOM05D004526 ORTHO05D005548 8.8e-110 401.0 408 57.6
arahy.Tifrunner.gnm1.ann1.PC3EEW Arachis hypogaea HOM05D004526 ORTHO05D005548 8.8e-110 401.0 408 57.6
MD17G1047000 Malus domestica HOM05D004526 ORTHO05D005548 1.1e-109 400.6 414 56.0
Sc11g0006930 Simmondsia chinensis HOM05D004526 ORTHO05D005548 1.5e-109 400.2 411 56.9
Lsat_1_v5_gn_4_176840 Lactuca sativa HOM05D004526 ORTHO05D005548 4.4e-109 398.7 407 56.0
Nn4g23045 Nelumbo nucifera HOM05D004526 ORTHO05D005548 7.4e-109 397.9 408 58.1
SalBow1G4721 Salvia bowleyana HOM05D004526 ORTHO05D005548 7.4e-109 397.9 405 57.0
VMungo0720G0008 Vigna mungo HOM05D004526 ORTHO05D005548 3.7e-108 395.6 397 57.2
FAN02G4162 Fragaria x ananassa HOM05D004526 ORTHO05D005548 8.2e-108 394.4 410 54.6
Medtr1g116060 Medicago truncatula HOM05D004526 ORTHO05D005548 1.1e-107 394.0 404 55.7
FvH4_6g49260 Fragaria vesca HOM05D004526 ORTHO05D005548 1.4e-107 393.7 410 54.6
Eucgr.I01917 Eucalyptus grandis HOM05D004526 ORTHO05D005548 2.4e-107 392.9 408 55.1
HanXRQChr09g0265571 Helianthus annuus HOM05D004526 ORTHO05D005548 3.1e-107 392.5 407 55.3
TAR622G0275 Trochodendron aralioides HOM05D004526 ORTHO05D005548 7.0e-107 391.3 378 60.8
unitig_578.g15969 Utricularia gibba HOM05D004526 ORTHO05D005548 2.6e-106 389.4 405 54.8
THA.LOC104811064 Tarenaya hassleriana HOM05D004526 ORTHO05D005548 3.8e-105 385.6 408 54.9
FAN05G4948 Fragaria x ananassa HOM05D004526 ORTHO05D005548 1.1e-104 384.0 428 52.3
MD09G1046200 Malus domestica HOM05D004526 ORTHO05D005548 3.2e-104 382.5 392 56.9
Sabra17G0069000 Salix brachista HOM05D004526 ORTHO05D005548 1.2e-103 380.6 391 55.8
FAN09G4881 Fragaria x ananassa HOM05D004526 ORTHO05D005548 1.6e-103 380.2 444 50.7
arahy.Tifrunner.gnm1.ann1.C6A6VI Arachis hypogaea HOM05D004526 ORTHO05D005548 8.0e-103 377.9 408 54.7
Aa31LG5G15080 Aethionema arabicum HOM05D004526 ORTHO05D005548 4.4e-101 372.1 404 53.0
CDE04G0248 Ceratophyllum demersum HOM05D004526 ORTHO05D005548 1.7e-100 370.2 420 53.8
ECA232G3358 Erigeron canadensis HOM05D004526 ORTHO05D005548 2.8e-100 369.4 397 52.4
ATR0051G026 Amborella trichopoda HOM05D004526 ORTHO05D005548 2.4e-99 366.3 412 52.7
HPP92_012836 Vanilla planifolia HOM05D004526 ORTHO05D005548 4.1e-99 365.5 393 55.0
BcaB04g19307 Brassica carinata HOM05D004526 ORTHO05D005548 1.2e-98 364.0 404 51.0
BraA03t12552Z Brassica rapa HOM05D004526 ORTHO05D005548 1.6e-98 363.6 404 50.7
Carub.0003s0384 Capsella rubella HOM05D004526 ORTHO05D005548 1.6e-98 363.6 406 51.5
Sp3g03530 Schrenkiella parvula HOM05D004526 ORTHO05D005548 2.0e-98 363.2 404 51.0
Thhalv10020725m.g Eutrema salsugineum HOM05D004526 ORTHO05D005548 5.9e-98 361.7 406 50.7
A03p33780 Brassica napus HOM05D004526 ORTHO05D005548 7.7e-98 361.3 404 50.5
C03p41080 Brassica napus HOM05D004526 ORTHO05D005548 7.7e-98 361.3 404 50.5
BcaC01g04355 Brassica carinata HOM05D004526 ORTHO05D005548 1.0e-97 360.9 404 50.5
BolC3t16397H Brassica oleracea HOM05D004526 ORTHO05D005548 1.0e-97 360.9 404 50.5
Lj5g0010112 Lotus japonicus HOM05D004526 ORTHO05D004861 1.7e-97 360.1 383 55.4
MD09G1046500 Malus domestica HOM05D004526 ORTHO05D005548 1.7e-97 360.1 397 53.9
Nitab4.5_0001504g0050 Nicotiana tabacum HOM05D004526 ORTHO05D005548 6.5e-97 358.2 582 40.9
AL3G14740 Arabidopsis lyrata HOM05D004526 ORTHO05D005548 1.5e-96 357.1 404 49.8
MELO3C021974.2 Cucumis melo HOM05D004526 ORTHO05D005548 1.9e-96 356.7 343 59.2
FAN14G2223 Fragaria x ananassa HOM05D004526 ORTHO05D005548 1.9e-96 356.7 444 48.6
AT3G04680 Arabidopsis thaliana HOM05D004526 ORTHO05D005548 2.5e-96 356.3 404 49.5
Zm00001eb205260 Zea mays HOM05D004526 ORTHO05D005548 5.5e-96 355.1 410 48.5
HanXRQChr12g0357441 Helianthus annuus HOM05D004526 ORTHO05D005548 1.6e-95 353.6 407 52.1
CARHR078910 Cardamine hirsuta HOM05D004526 ORTHO05D005548 1.4e-94 350.5 403 49.4
SEGI_10762 Sequoiadendron giganteum HOM05D004526 ORTHO05D005548 1.3e-92 344.0 406 48.0
CSS0037061 Camellia sinensis var. sinensis HOM05D004526 ORTHO05D005548 3.1e-91 339.3 360 57.8
Os02g0217500 Oryza sativa ssp. japonica HOM05D004526 ORTHO05D005548 1.7e-89 333.6 410 45.9
Sp1g35350 Schrenkiella parvula HOM05D004526 ORTHO05D005548 2.9e-89 332.8 401 47.6
Cfa007708 Carpinus fangiana HOM05D004526 ORTHO05D005548 4.2e-88 328.9 375 54.4
Mapoly0016s0080 Marchantia polymorpha HOM05D004526 ORTHO05D005548 3.4e-85 319.3 418 44.5
SMO165G0052 Selaginella moellendorffii HOM05D004526 ORTHO05D005548 5.4e-83 312.0 414 43.7
AagrBONN_evm.TU.Sc2ySwM_344.3939 Anthoceros agrestis HOM05D004526 ORTHO05D005548 9.2e-83 311.2 420 44.3
HPP92_009728 Vanilla planifolia HOM05D004526 ORTHO05D005548 5.6e-80 302.0 390 44.1
AUR62031643 Chenopodium quinoa HOM05D004526 ORTHO05D005548 2.4e-75 286.6 308 54.5
TPR.G10385 Trifolium pratense HOM05D004526 ORTHO05D005548 4.1e-75 285.8 229 67.7
AUR62038875 Chenopodium quinoa HOM05D004526 ORTHO05D005548 1.7e-73 280.4 305 54.8
CBR_g42172 Chara braunii HOM05D004526 ORTHO05D005548 3.1e-70 269.6 430 39.3
vmacro05738 Vaccinium macrocarpon HOM05D004526 ORTHO05D005548 1.5e-64 250.8 242 58.7
TAR305G0002 Trochodendron aralioides HOM05D004526 ORTHO05D005548 9.5e-64 248.1 258 55.0
Pp3c21_6910 Physcomitrium patens HOM05D004526 ORTHO05D005548 1.4e-62 244.2 346 44.8
AT5G39930 Arabidopsis thaliana HOM05D004526 ORTHO05D005548 1.4e-59 234.2 406 38.7
A04p15620 Brassica napus HOM05D004526 ORTHO05D005548 1.4e-59 234.2 401 38.4
C04p49900 Brassica napus HOM05D004526 ORTHO05D005548 1.2e-58 231.1 394 39.1
BcaC02g08842 Brassica carinata HOM05D004526 ORTHO05D005548 1.6e-58 230.7 394 39.3
BolC4t26581H Brassica oleracea HOM05D004526 ORTHO05D005548 1.6e-58 230.7 388 39.7
AL7G50210 Arabidopsis lyrata HOM05D004526 ORTHO05D005548 1.0e-57 228.0 400 38.2
C06p02960 Brassica napus HOM05D004526 ORTHO05D005548 1.7e-57 227.3 404 39.6
BolC6t35419H Brassica oleracea HOM05D004526 ORTHO05D005548 1.7e-57 227.3 404 39.6
BraA04t17197Z Brassica rapa HOM05D004526 ORTHO05D005548 1.9e-56 223.8 417 36.9
BcaB06g27742 Brassica carinata HOM05D004526 ORTHO05D005548 2.8e-55 219.9 396 37.9
SHI08813 Sapria himalayana HOM05D004526 ORTHO05D005548 4.7e-55 219.2 346 41.9
PRCOL_00003252 Prasinoderma coloniale HOM05D004526 ORTHO05D005548 7.6e-53 211.8 405 35.1
Thhalv10028283m.g Eutrema salsugineum HOM05D004526 ORTHO05D005548 1.4e-51 207.6 369 36.6
AUR62010753 Chenopodium quinoa HOM05D004526 ORTHO05D005548 1.9e-51 207.2 207 57.0
BcaC08g43036 Brassica carinata HOM05D004526 ORTHO05D005548 4.1e-51 206.1 398 36.9
MCO09G184 Micromonas commoda HOM05D004526 ORTHO05D005548 2.3e-49 200.3 419 33.4
arahy.Tifrunner.gnm1.ann1.QUI3Q9 Arachis hypogaea HOM05D004526 ORTHO05D005548 1.1e-43 181.4 237 46.8
CARHR262250 Cardamine hirsuta HOM05D004526 ORTHO05D005548 2.5e-40 170.2 393 31.6
Cre03.g194800 Chlamydomonas reinhardtii HOM05D004526 ORTHO05D005548 1.8e-38 164.1 396 31.3
Sp7g01800 Schrenkiella parvula HOM05D004526 ORTHO05D005548 9.0e-38 161.8 418 32.8
Carub.0007s3580 Capsella rubella HOM05D004526 ORTHO05D005548 4.5e-37 159.5 351 33.9
Cpa.g.sc14.41 Carica papaya HOM05D004526 ORTHO05D005548 1.7e-36 157.5 94 80.9
arahy.Tifrunner.gnm1.ann1.9G88ZW Arachis hypogaea HOM05D004526 ORTHO05D005548 1.8e-30 137.5 194 47.9
BcaB07g33761 Brassica carinata HOM05D004526 ORTHO05D005548 1.1e-27 128.3 296 30.7
arahy.Tifrunner.gnm1.ann1.HJC8LN Arachis hypogaea HOM05D004526 ORTHO05D005548 1.2e-26 124.8 191 43.5
Actinidia27487 Actinidia chinensis HOM05D004526 ORTHO05D005548 3.3e-24 116.7 110 60.0
arahy.Tifrunner.gnm1.ann1.TUDV7U Arachis hypogaea HOM05D004526 ORTHO05D005548 5.8e-21 105.9 96 58.3
SpUn0485_0020 Schrenkiella parvula HOM05D004526 ORTHO05D005548 1.8e-17 94.4 231 31.2
CAN.G742.26 Capsicum annuum HOM05D004526 ORTHO05D005548 9.7e-16 88.6 82 57.3
MD09G1046100 Malus domestica HOM05D004526 ORTHO05D005548 1.0e-12 78.6 67 61.2
Sp7g07820 Schrenkiella parvula HOM05D004526 ORTHO05D005548 1.1e-11 75.1 118 39.0
SHI08814 Sapria himalayana HOM05D004526 ORTHO05D005548 4.2e-11 73.2 42 73.8
TPR.G73 Trifolium pratense HOM05D004526 ORTHO05D005548 1.4e-09 68.2 39 79.5
Sp5g20800 Schrenkiella parvula HOM05D004526 ORTHO05D005548 3.9e-09 66.6 43 67.4
Actinidia23573 Actinidia chinensis HOM05D004526 ORTHO05D005548 1.8e-06 57.8 33 81.8

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (8 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (6 genes)
Brassica napus (5 genes)
Brassica oleracea (3 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (0 genes)
Capsella rubella (2 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (4 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (4 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (6 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings