Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.0e-162 576.6 285 100.0
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 3.0e-106 389.0 422 54.0
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 6.0e-102 374.8 355 58.9
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 5.0e-101 371.7 422 51.7
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 5.8e-97 358.2 422 50.0
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 8.3e-96 354.4 422 50.2
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 1.1e-95 354.0 423 49.4
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 1.1e-95 354.0 423 49.4
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 1.1e-95 354.0 423 50.1
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 1.6e-94 350.1 422 48.8
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 2.1e-94 349.7 422 48.8
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 2.7e-94 349.4 422 49.1
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 2.7e-94 349.4 422 48.3
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 6.0e-94 348.2 422 48.1
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 6.0e-94 348.2 422 47.9
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 7.8e-94 347.8 423 48.5
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.3e-93 347.1 422 47.9
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 1.7e-93 346.7 422 47.4
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 1.7e-93 346.7 422 48.6
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 1.7e-93 346.7 423 48.9
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 2.3e-93 346.3 422 48.8
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 2.3e-93 346.3 422 47.9
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 3.0e-93 345.9 422 47.6
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 3.0e-93 345.9 408 50.5
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 6.6e-93 344.7 422 48.6
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 6.6e-93 344.7 423 48.9
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 1.1e-92 344.0 422 49.1
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 1.1e-92 344.0 422 49.5
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 3.3e-92 342.4 426 49.1
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 3.3e-92 342.4 424 49.1
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 4.3e-92 342.0 422 48.1
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 4.3e-92 342.0 426 48.8
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 4.3e-92 342.0 422 47.9
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 9.5e-92 340.9 422 48.3
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 1.1e-90 337.4 423 47.5
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 1.4e-90 337.0 422 48.1
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 1.4e-90 337.0 423 47.0
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 1.8e-90 336.7 422 46.0
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 2.3e-90 336.3 423 47.5
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 3.1e-90 335.9 422 46.2
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 5.2e-90 335.1 423 48.0
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.2e-89 334.0 429 48.3
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 1.5e-89 333.6 423 48.0
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 2.6e-89 332.8 422 48.1
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 3.4e-89 332.4 423 47.8
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 3.4e-89 332.4 423 47.8
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 3.4e-89 332.4 423 46.6
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 9.9e-89 330.9 453 46.1
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 1.7e-88 330.1 423 45.9
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 3.7e-88 328.9 422 46.2
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 6.4e-88 328.2 423 47.0
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 8.3e-88 327.8 422 46.4
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.4e-87 326.2 423 46.8
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 4.1e-87 325.5 422 45.5
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 5.4e-87 325.1 422 46.4
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 5.4e-87 325.1 422 45.5
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 3.5e-86 322.4 422 45.5
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 4.6e-86 322.0 422 46.7
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 4.6e-86 322.0 423 44.7
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 1.7e-85 320.1 328 55.2
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 8.6e-85 317.8 324 55.2
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 1.5e-84 317.0 426 46.0
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 7.3e-84 314.7 422 46.2
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 2.1e-83 313.2 353 49.9
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 2.8e-83 312.8 423 45.2
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 3.1e-82 309.3 327 53.2
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 5.2e-82 308.5 423 44.2
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 8.9e-82 307.8 422 42.7
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 1.7e-80 303.5 423 42.6
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 2.2e-80 303.1 423 44.2
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 8.4e-80 301.2 328 53.7
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 1.1e-79 300.8 423 42.3
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 1.4e-79 300.4 423 43.0
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 2.4e-79 299.7 423 42.1
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 3.2e-79 299.3 340 50.9
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 4.2e-79 298.9 423 41.8
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 5.4e-79 298.5 325 53.5
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 9.2e-79 297.7 424 44.1
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 1.2e-78 297.4 327 51.4
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 4.6e-78 295.4 423 41.8
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 6.6e-77 291.6 421 42.8
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 8.7e-77 291.2 428 43.2
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 1.4e-74 283.9 421 41.1
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 9.9e-73 277.7 428 40.7
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 1.3e-72 277.3 426 41.1
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 2.9e-72 276.2 426 41.1
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 2.4e-71 273.1 429 40.1
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 2.4e-71 273.1 426 40.8
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 3.2e-71 272.7 429 40.3
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 1.2e-70 270.8 429 40.6
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 1.6e-70 270.4 421 41.1
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 1.6e-70 270.4 424 39.6
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 4.6e-70 268.9 427 40.0
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 1.0e-69 267.7 429 39.9
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 1.0e-69 267.7 429 39.9
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 1.5e-68 263.8 429 39.6
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 1.6e-62 243.8 362 40.3
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.3e-61 240.7 313 47.3
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 2.3e-61 240.0 260 51.5
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 5.1e-61 238.8 363 39.4
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 8.7e-61 238.0 355 41.1
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 3.4e-57 226.1 322 40.7
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 5.5e-47 192.2 243 46.5
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 6.5e-40 168.7 419 29.6
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 2.3e-37 160.2 199 46.7
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 4.3e-36 156.0 165 51.5
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 1.2e-33 147.9 97 71.1
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 1.9e-31 140.6 267 31.5
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 2.6e-28 130.2 127 52.8
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 5.9e-25 119.0 134 48.5
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 2.2e-24 117.1 365 26.0
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 1.8e-21 107.5 92 62.0
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 4.4e-20 102.8 351 25.1
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 3.8e-16 89.7 86 48.8
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 1.9e-15 87.4 85 49.4
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 3.4e-12 76.6 185 34.1
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 1.3e-11 74.7 182 32.4
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 3.2e-07 60.1 67 41.8

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (0 genes)
Olea europaea (6 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings