Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011641 Camellia sinensis var. sinensis HOM05D005853 ORTHO05D007308 1.5e-56 223.0 146 100.0
CSS0003127 Camellia sinensis var. sinensis HOM05D005853 ORTHO05D007308 1.3e-55 219.9 146 98.6
Dinv41601 Davidia involucrata HOM05D005853 ORTHO05D007308 4.6e-34 148.3 151 74.2
ClCG06G008520 Citrullus lanatus HOM05D005853 ORTHO05D007308 1.5e-24 116.7 150 64.0
CiPaw.04G164300 Carya illinoinensis HOM05D005853 ORTHO05D007308 5.7e-24 114.8 164 57.9
QL02p085450 Quercus lobata HOM05D005853 ORTHO05D007308 1.3e-23 113.6 158 62.7
Cpa.g.sc23.111 Carica papaya HOM05D005853 ORTHO05D007308 8.2e-23 110.9 101 65.3
Ciclev10009718m.g Citrus clementina HOM05D005853 ORTHO05D007308 1.2e-21 107.1 137 54.0
TWI34G0492 Tripterygium wilfordii HOM05D005853 ORTHO05D007308 1.5e-21 106.7 121 53.7
TAR624G1380 Trochodendron aralioides HOM05D005853 ORTHO05D007308 5.9e-21 104.8 152 61.2
VMungo0331G1451 Vigna mungo HOM05D005853 ORTHO05D007308 1.0e-20 104.0 76 67.1
Phvul.010G149900 Phaseolus vulgaris HOM05D005853 ORTHO05D007308 1.7e-20 103.2 76 67.1
Haze_25712 Corylus avellana HOM05D005853 ORTHO05D007308 2.2e-20 102.8 166 57.8
Glyma.08G205900 Glycine max HOM05D005853 ORTHO05D007308 5.0e-20 101.7 81 67.9
Manes.03G020200 Manihot esculenta HOM05D005853 ORTHO05D007308 4.2e-19 98.6 131 51.9
Glyma.07G005500 Glycine max HOM05D005853 ORTHO05D007308 1.2e-18 97.1 80 71.2
Atru.chr7.1347 Acer truncatum HOM05D005853 ORTHO05D007308 2.1e-18 96.3 107 57.0
Gorai.009G024500 Gossypium raimondii HOM05D005853 ORTHO05D007308 2.1e-18 96.3 145 61.4
Manes.16G116400 Manihot esculenta HOM05D005853 ORTHO05D007308 4.7e-18 95.1 133 47.4
COL.COLO4_34918 Corchorus olitorius HOM05D005853 ORTHO05D007308 6.1e-18 94.7 145 57.2
MELO3C025336.2 Cucumis melo HOM05D005853 ORTHO05D007308 8.0e-18 94.4 167 56.3
BcaB03g16471 Brassica carinata HOM05D005853 ORTHO05D007308 1.4e-17 93.6 116 55.2
Gohir.A08G241100 Gossypium hirsutum HOM05D005853 ORTHO05D007308 1.4e-17 93.6 146 54.1
TAR636G2025 Trochodendron aralioides HOM05D005853 ORTHO05D007308 1.4e-17 93.6 112 64.3
Migut.I00880 Erythranthe guttata HOM05D005853 ORTHO05D007308 1.8e-17 93.2 120 52.5
ECA240G1876 Erigeron canadensis HOM05D005853 ORTHO05D007308 2.3e-17 92.8 119 53.8
Gorai.009G024400 Gossypium raimondii HOM05D005853 ORTHO05D007308 3.0e-17 92.4 116 59.5
A06p34130 Brassica napus HOM05D005853 ORTHO05D007308 5.2e-17 91.7 119 52.1
BraA06t26346Z Brassica rapa HOM05D005853 ORTHO05D007308 5.2e-17 91.7 119 52.1
Gohir.A05G022900 Gossypium hirsutum HOM05D005853 ORTHO05D007308 5.2e-17 91.7 146 61.0
Gohir.A06G062400 Gossypium hirsutum HOM05D005853 ORTHO05D007308 5.2e-17 91.7 61 73.8
Gorai.010G070700 Gossypium raimondii HOM05D005853 ORTHO05D007308 5.2e-17 91.7 60 75.0
PGR102G0312 Punica granatum HOM05D005853 ORTHO05D007308 5.2e-17 91.7 136 54.4
Carub.0003s3118 Capsella rubella HOM05D005853 ORTHO05D007308 6.7e-17 91.3 62 71.0
Duzib187G1793 Durio zibethinus HOM05D005853 ORTHO05D007308 8.8e-17 90.9 102 54.9
Gohir.D05G024300 Gossypium hirsutum HOM05D005853 ORTHO05D007308 8.8e-17 90.9 115 60.0
Gohir.D05G024400 Gossypium hirsutum HOM05D005853 ORTHO05D007308 8.8e-17 90.9 115 53.9
Oeu033499.2 Olea europaea HOM05D005853 ORTHO05D007308 1.1e-16 90.5 85 75.3
Thecc.09G110800 Theobroma cacao HOM05D005853 ORTHO05D007308 1.1e-16 90.5 102 54.9
Gohir.A05G022800 Gossypium hirsutum HOM05D005853 ORTHO05D007308 1.5e-16 90.1 116 59.5
Aa31LG8G14610 Aethionema arabicum HOM05D005853 ORTHO05D007308 3.3e-16 89.0 113 54.0
Peaxi162Scf00329g00432 Petunia axillaris HOM05D005853 ORTHO05D007308 3.3e-16 89.0 143 58.7
Sopen04g003890 Solanum pennellii HOM05D005853 ORTHO05D007308 3.3e-16 89.0 70 65.7
THA.LOC104804586 Tarenaya hassleriana HOM05D005853 ORTHO05D007308 4.4e-16 88.6 107 52.3
CDE04G2734 Ceratophyllum demersum HOM05D005853 ORTHO05D007308 5.7e-16 88.2 56 85.7
Nitab4.5_0000129g0220 Nicotiana tabacum HOM05D005853 ORTHO05D007308 5.7e-16 88.2 94 58.5
GSVIVG01017090001 Vitis vinifera HOM05D005853 ORTHO05D007308 5.7e-16 88.2 77 89.6
BcaC01g02942 Brassica carinata HOM05D005853 ORTHO05D007308 7.4e-16 87.8 100 52.0
C03p58060 Brassica napus HOM05D005853 ORTHO05D007308 7.4e-16 87.8 100 52.0
BolC3t18080H Brassica oleracea HOM05D005853 ORTHO05D007308 7.4e-16 87.8 100 52.0
Lj3g0010943 Lotus japonicus HOM05D005853 ORTHO05D007308 7.4e-16 87.8 47 85.1
RcHm_v2.0_Chr2g0090481 Rosa chinensis HOM05D005853 ORTHO05D007308 7.4e-16 87.8 62 69.4
CiPaw.03G232300 Carya illinoinensis HOM05D005853 ORTHO05D007308 9.7e-16 87.4 80 87.5
Eucgr.J02982 Eucalyptus grandis HOM05D005853 ORTHO05D007308 9.7e-16 87.4 97 60.8
Sed0019935 Sechium edule HOM05D005853 ORTHO05D007308 9.7e-16 87.4 144 59.7
GSVIVG01015393001 Vitis vinifera HOM05D005853 ORTHO05D007308 9.7e-16 87.4 52 90.4
Ah.01g021430 Amaranthus hybridus HOM05D005853 ORTHO05D007308 1.7e-15 86.7 107 48.6
A07p03810 Brassica napus HOM05D005853 ORTHO05D007308 1.7e-15 86.7 110 50.0
Nn2g11754 Nelumbo nucifera HOM05D005853 ORTHO05D007308 1.7e-15 86.7 158 56.3
Potri.018G079700 Populus trichocarpa HOM05D005853 ORTHO05D007308 1.7e-15 86.7 157 52.9
FvH4_1g04830 Fragaria vesca HOM05D000050 ORTHO05D009634 2.2e-15 86.3 45 86.7
FAN19G0481 Fragaria x ananassa HOM05D000050 ORTHO05D009634 2.2e-15 86.3 45 86.7
FAN26G1381 Fragaria x ananassa HOM05D000050 ORTHO05D009634 2.2e-15 86.3 45 86.7
THA.LOC104808760 Tarenaya hassleriana HOM05D005853 ORTHO05D007308 2.2e-15 86.3 123 48.0
BcaC06g36242 Brassica carinata HOM05D005853 ORTHO05D007308 2.8e-15 85.9 118 50.8
C07p06090 Brassica napus HOM05D005853 ORTHO05D007308 2.8e-15 85.9 118 50.8
BolC7t41022H Brassica oleracea HOM05D005853 ORTHO05D007308 2.8e-15 85.9 118 50.8
Lalb_Chr22g0351311 Lupinus albus HOM05D005853 ORTHO05D007308 2.8e-15 85.9 126 62.7
Sp3g30580 Schrenkiella parvula HOM05D005853 ORTHO05D007308 2.8e-15 85.9 109 50.5
Solyc04g008710.4 Solanum lycopersicum HOM05D005853 ORTHO05D007308 2.8e-15 85.9 114 51.8
Aqoxy7G03791 Aquilegia oxysepala HOM05D005853 ORTHO05D007308 3.7e-15 85.5 123 46.3
Gohir.D06G060700 Gossypium hirsutum HOM05D005853 ORTHO05D007308 3.7e-15 85.5 106 52.8
AT2G17240 Arabidopsis thaliana HOM05D005853 ORTHO05D007308 4.8e-15 85.1 116 49.1
BraA07t28175Z Brassica rapa HOM05D005853 ORTHO05D007308 4.8e-15 85.1 117 51.3
Prupe.7G230800 Prunus persica HOM05D005853 ORTHO05D007308 4.8e-15 85.1 47 87.2
Sed0009205 Sechium edule HOM05D005853 ORTHO05D007308 4.8e-15 85.1 78 87.2
MSTRG.22678 Avicennia marina HOM05D005853 ORTHO05D007308 6.3e-15 84.7 149 52.3
Nitab4.5_0001983g0030 Nicotiana tabacum HOM05D005853 ORTHO05D007308 8.2e-15 84.3 148 56.1
Psat7g250480 Pisum sativum HOM05D005853 ORTHO05D007308 8.2e-15 84.3 47 80.9
MSTRG.11072 Avicennia marina HOM05D005853 ORTHO05D007308 1.1e-14 84.0 107 52.3
Prupe.3G069800 Prunus persica HOM05D005853 ORTHO05D007308 1.1e-14 84.0 69 63.8
Carub.0003s2483 Capsella rubella HOM05D005853 ORTHO05D007308 1.4e-14 83.6 55 72.7
MD02G1047200 Malus domestica HOM05D005853 ORTHO05D007308 1.8e-14 83.2 102 58.8
Thecc.06G089900 Theobroma cacao HOM05D005853 ORTHO05D007308 1.8e-14 83.2 87 74.7
Hma1.2p1_1455F.1_g284500 Hydrangea macrophylla HOM05D005853 ORTHO05D007308 2.4e-14 82.8 66 63.6
Thhalv10022893m.g Eutrema salsugineum HOM05D005853 ORTHO05D007308 4.1e-14 82.0 61 70.5
CBR_g48216 Chara braunii HOM05D005853 ORTHO05D007308 5.3e-14 81.6 77 62.3
Duzib150G0727 Durio zibethinus HOM05D005853 ORTHO05D007308 5.3e-14 81.6 42 85.7
AL3G39990 Arabidopsis lyrata HOM05D005853 ORTHO05D007308 9.1e-14 80.9 41 87.8
HanXRQChr09g0239771 Helianthus annuus HOM05D005853 ORTHO05D007308 9.1e-14 80.9 117 47.0
Medtr4g012810 Medicago truncatula HOM05D005853 ORTHO05D007308 9.1e-14 80.9 137 53.3
MBI13_g01620_MAGBIO Magnolia biondii HOM05D005853 ORTHO05D007308 1.2e-13 80.5 151 57.0
PGR102G2925 Punica granatum HOM05D005853 ORTHO05D007308 1.2e-13 80.5 46 82.6
SGA_v2.0_scaffold5G02572 Striga asiatica HOM05D005853 ORTHO05D007308 1.6e-13 80.1 119 47.1
Lsat_1_v5_gn_7_40661 Lactuca sativa HOM05D005853 ORTHO05D007308 2.0e-13 79.7 122 50.0
AL3G50100 Arabidopsis lyrata HOM05D005853 ORTHO05D007308 3.5e-13 79.0 125 48.0
AT3G24506 Arabidopsis thaliana HOM05D005853 ORTHO05D007308 4.5e-13 78.6 90 54.4
PGSC0003DMG400025300 Solanum tuberosum HOM05D005853 ORTHO05D007308 4.5e-13 78.6 89 53.9
CsaV3_1G030480 Cucumis sativus L. HOM05D005853 ORTHO05D007308 5.9e-13 78.2 101 50.5
CANSAT56G2684 Cannabis sativa HOM05D005853 ORTHO05D007308 7.7e-13 77.8 42 83.3
Pp3c2_3480 Physcomitrium patens HOM05D005853 ORTHO05D007308 7.7e-13 77.8 104 46.2
BcaB08g34716 Brassica carinata HOM05D005853 ORTHO05D007308 1.3e-12 77.0 107 54.2
DCAR_028712 Daucus carota HOM05D005181 ORTHO05D006086 1.3e-12 77.0 116 52.6
MD09G1211800 Malus domestica HOM05D005853 ORTHO05D007308 1.3e-12 77.0 98 50.0
CDE07G2010 Ceratophyllum demersum HOM05D005853 ORTHO05D007308 2.2e-12 76.3 116 49.1
TPR.G17682 Trifolium pratense HOM05D005853 ORTHO05D007308 2.2e-12 76.3 87 47.1
Zm00001eb247070 Zea mays HOM05D005853 ORTHO05D007308 2.9e-12 75.9 47 74.5
FvH4_6g31380 Fragaria vesca HOM05D005853 ORTHO05D007308 3.8e-12 75.5 40 82.5
RcHm_v2.0_Chr2g0138141 Rosa chinensis HOM05D005853 ORTHO05D007308 3.8e-12 75.5 40 82.5
Os02g0614200 Oryza sativa ssp. japonica HOM05D005853 ORTHO05D007308 1.1e-11 73.9 46 73.9
arahy.Tifrunner.gnm1.ann1.84WEKL Arachis hypogaea HOM05D005853 ORTHO05D007308 1.5e-11 73.6 35 91.4
arahy.Tifrunner.gnm1.ann1.JCT5CV Arachis hypogaea HOM05D005853 ORTHO05D007308 1.5e-11 73.6 35 91.4
Cc04_g03260 Coffea canephora HOM05D005853 ORTHO05D007308 1.5e-11 73.6 109 46.8
Zm00001eb184630 Zea mays HOM05D005853 ORTHO05D007308 2.5e-11 72.8 38 81.6
PSO210G7285 Papaver somniferum HOM05D005853 ORTHO05D007308 3.2e-11 72.4 40 80.0
Pp3c1_36270 Physcomitrium patens HOM05D005853 ORTHO05D007308 4.2e-11 72.0 111 45.0
SMO347G0073 Selaginella moellendorffii HOM05D005853 ORTHO05D007308 5.5e-11 71.6 35 85.7
ATR0724G055 Amborella trichopoda HOM05D005853 ORTHO05D007308 7.2e-11 71.2 106 46.2
Lsat_1_v5_gn_8_95440 Lactuca sativa HOM05D005853 ORTHO05D007308 7.2e-11 71.2 105 49.5
PSO210G6545 Papaver somniferum HOM05D005853 ORTHO05D007308 7.2e-11 71.2 40 77.5
SEGI_01601 Sequoiadendron giganteum HOM05D005853 ORTHO05D007308 7.2e-11 71.2 106 45.3
unitig_22.g5469 Utricularia gibba HOM05D005853 ORTHO05D007308 7.2e-11 71.2 84 51.2
Mapoly0029s0025 Marchantia polymorpha HOM05D005853 ORTHO05D007308 2.1e-10 69.7 35 80.0
CSS0027693 Camellia sinensis var. sinensis HOM05D005853 ORTHO05D007308 2.7e-10 69.3 96 52.1
SalBow2G1576 Salvia bowleyana HOM05D005853 ORTHO05D007308 1.4e-09 67.0 96 46.9
Sc12g0009330 Simmondsia chinensis HOM05D005853 ORTHO05D007308 1.2e-08 63.9 99 43.4
Oeu024066.2 Olea europaea HOM05D005853 ORTHO05D007308 9.7e-08 60.8 174 35.1
HPP92_004788 Vanilla planifolia HOM05D005853 ORTHO05D007308 9.1e-06 54.3 43 69.8

Acer truncatum (1 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (0 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (2 genes)
Glycine max (2 genes)
Gossypium hirsutum (7 genes)
Gossypium raimondii (3 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (2 genes)
Quercus lobata (1 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (2 genes)
Salix brachista (0 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (2 genes)

Program Settings