Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011162 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 4.3e-113 411.4 214 100.0
CSS0022013 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 2.6e-110 402.1 215 98.6
Actinidia12688 Actinidia chinensis HOM05D006036 ORTHO05D007736 8.7e-90 334.0 221 77.4
Rhsim01G0147400 Rhododendron simsii HOM05D006036 ORTHO05D007736 4.3e-89 331.6 229 79.9
vmacro21009 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 5.5e-76 288.1 203 75.9
vmacro21008 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 1.2e-75 287.0 152 89.5
QL08p052466 Quercus lobata HOM05D006036 ORTHO05D007736 1.8e-74 283.1 222 67.1
Sopen01g037100 Solanum pennellii HOM05D006036 ORTHO05D007736 3.9e-74 282.0 163 80.4
Solyc01g091360.4 Solanum lycopersicum HOM05D006036 ORTHO05D007736 8.8e-74 280.8 163 80.4
PGSC0003DMG400012774 Solanum tuberosum HOM05D006036 ORTHO05D007736 8.8e-74 280.8 163 79.8
Oeu037915.1 Olea europaea HOM05D006036 ORTHO05D007736 1.1e-73 280.4 227 63.9
Nn1g01232 Nelumbo nucifera HOM05D006036 ORTHO05D007736 4.4e-73 278.5 224 66.1
CiPaw.01G261900 Carya illinoinensis HOM05D006036 ORTHO05D007736 8.2e-72 274.2 221 65.6
SalBow5G0783 Salvia bowleyana HOM05D006036 ORTHO05D007736 1.8e-71 273.1 228 63.6
TPR.G9852 Trifolium pratense HOM05D006036 ORTHO05D007736 2.4e-71 272.7 163 77.9
Prupe.2G145700 Prunus persica HOM05D006036 ORTHO05D007736 3.1e-71 272.3 221 65.6
Cpa.g.sc349.4 Carica papaya HOM05D006036 ORTHO05D007736 9.1e-71 270.8 223 65.5
GSVIVG01027612001 Vitis vinifera HOM05D006036 ORTHO05D007736 1.2e-70 270.4 220 65.0
TWI14G1308 Tripterygium wilfordii HOM05D006036 ORTHO05D007736 1.6e-70 270.0 224 64.7
EL10Ac1g00899 Beta vulgaris HOM05D006036 ORTHO05D007736 2.0e-70 269.6 168 78.0
SalBow5G3583 Salvia bowleyana HOM05D006036 ORTHO05D007736 2.0e-70 269.6 228 62.7
Gohir.A08G134500 Gossypium hirsutum HOM05D006036 ORTHO05D007736 4.5e-70 268.5 221 64.7
Medtr4g023550 Medicago truncatula HOM05D006036 ORTHO05D007736 5.9e-70 268.1 163 75.5
Cfa001720 Carpinus fangiana HOM05D006036 ORTHO05D007736 7.7e-70 267.7 221 63.8
Hund17020 Selenicereus undatus HOM05D006036 ORTHO05D007736 7.7e-70 267.7 168 76.2
CsaV3_6G006160 Cucumis sativus L. HOM05D006036 ORTHO05D007736 1.0e-69 267.3 168 76.2
FAN03G0372 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.3e-69 266.9 223 64.1
CDE02G2016 Ceratophyllum demersum HOM05D006036 ORTHO05D007736 1.7e-69 266.5 168 78.6
Cc02_g36690 Coffea canephora HOM05D006036 ORTHO05D007736 2.2e-69 266.2 166 76.5
Glyma.01G142900 Glycine max HOM05D006036 ORTHO05D007736 2.2e-69 266.2 165 75.2
Manes.05G045200 Manihot esculenta HOM05D006036 ORTHO05D007736 2.2e-69 266.2 226 63.3
Aqoxy7G00627 Aquilegia oxysepala HOM05D006036 ORTHO05D007736 2.9e-69 265.8 168 75.6
MSTRG.4890 Avicennia marina HOM05D006036 ORTHO05D007736 2.9e-69 265.8 168 77.4
Duzib133G1287 Durio zibethinus HOM05D006036 ORTHO05D007736 2.9e-69 265.8 224 64.7
Psat7g231640 Pisum sativum HOM05D006036 ORTHO05D007736 2.9e-69 265.8 165 74.5
Haze_16816 Corylus avellana HOM05D006036 ORTHO05D007736 3.8e-69 265.4 221 63.8
Ca_03013_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 6.5e-69 264.6 165 72.7
Sed0014119 Sechium edule HOM05D006036 ORTHO05D007736 6.5e-69 264.6 168 75.6
unitig_8.g4983 Utricularia gibba HOM05D006036 ORTHO05D007736 8.5e-69 264.2 168 75.6
FAN01G0425 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.1e-68 263.8 222 62.2
Glyma.03G023900 Glycine max HOM05D006036 ORTHO05D007736 1.5e-68 263.5 219 60.7
Sed0006891 Sechium edule HOM05D006036 ORTHO05D007736 1.5e-68 263.5 168 74.4
Ah.16g109830 Amaranthus hybridus HOM05D006036 ORTHO05D007736 2.5e-68 262.7 164 76.8
Glyma.14G070200 Glycine max HOM05D006036 ORTHO05D007736 2.5e-68 262.7 165 73.9
RcHm_v2.0_Chr1g0350591 Rosa chinensis HOM05D006036 ORTHO05D007736 2.5e-68 262.7 227 62.1
AUR62013628 Chenopodium quinoa HOM05D006036 ORTHO05D007736 3.2e-68 262.3 168 75.0
FAN10G3538 Fragaria x ananassa HOM05D006036 ORTHO05D007736 3.2e-68 262.3 223 62.3
Eucgr.E01417 Eucalyptus grandis HOM05D006036 ORTHO05D007736 4.2e-68 261.9 168 75.0
Dinv32378 Davidia involucrata HOM05D006036 ORTHO05D007736 5.5e-68 261.5 206 68.4
MD02G1204100 Malus domestica HOM05D006036 ORTHO05D007736 5.5e-68 261.5 226 63.7
Nitab4.5_0005372g0020 Nicotiana tabacum HOM05D006036 ORTHO05D007736 5.5e-68 261.5 218 62.8
Thecc.01G376100 Theobroma cacao HOM05D006036 ORTHO05D007736 7.2e-68 261.2 166 76.5
Lj3g0008791 Lotus japonicus HOM05D006036 ORTHO05D007736 1.2e-67 260.4 165 73.3
Sc02g0002580 Simmondsia chinensis HOM05D006036 ORTHO05D007736 2.1e-67 259.6 168 75.0
Sabra02G0117300 Salix brachista HOM05D006036 ORTHO05D007736 4.7e-67 258.5 165 76.4
PGR042G0035 Punica granatum HOM05D006036 ORTHO05D007736 6.1e-67 258.1 234 61.5
Sabra02G0115600 Salix brachista HOM05D006036 ORTHO05D007736 6.1e-67 258.1 165 75.8
MBI04_g35276_MAGBIO Magnolia biondii HOM05D006036 ORTHO05D007736 8.0e-67 257.7 177 71.2
FvH4_7g11910 Fragaria vesca HOM05D006036 ORTHO05D007736 1.0e-66 257.3 223 62.3
arahy.Tifrunner.gnm1.ann1.B3VI1A Arachis hypogaea HOM05D006036 ORTHO05D007736 2.3e-66 256.1 165 73.3
CANSAT56G2189 Cannabis sativa HOM05D006036 ORTHO05D007736 4.0e-66 255.4 219 61.6
Potri.002G148400 Populus trichocarpa HOM05D006036 ORTHO05D007736 4.0e-66 255.4 165 74.5
Lalb_Chr07g0189801 Lupinus albus HOM05D006036 ORTHO05D007736 5.2e-66 255.0 165 71.5
HanXRQChr16g0520241 Helianthus annuus HOM05D006036 ORTHO05D007736 1.1e-65 253.8 168 72.0
Glyma.08G286100 Glycine max HOM05D006036 ORTHO05D007736 2.0e-65 253.1 162 72.8
Ciclev10022362m.g Citrus clementina HOM05D006036 ORTHO05D007736 3.3e-65 252.3 153 81.0
ECA234G4399 Erigeron canadensis HOM05D006036 ORTHO05D007736 3.3e-65 252.3 168 71.4
Lsat_1_v5_gn_4_40940 Lactuca sativa HOM05D006036 ORTHO05D007736 3.3e-65 252.3 168 72.0
Phvul.010G084400 Phaseolus vulgaris HOM05D006036 ORTHO05D007736 5.7e-65 251.5 165 72.1
AUR62004220 Chenopodium quinoa HOM05D006036 ORTHO05D007736 2.8e-64 249.2 157 77.1
Lj9A569G50 Lonicera japonica HOM05D006036 ORTHO05D007736 2.8e-64 249.2 206 62.1
A09p53070 Brassica napus HOM05D006036 ORTHO05D007736 1.1e-63 247.3 165 76.4
BraA09t40733Z Brassica rapa HOM05D006036 ORTHO05D007736 1.1e-63 247.3 165 76.4
DCAR_031531 Daucus carota HOM05D006036 ORTHO05D007736 1.1e-63 247.3 201 62.7
BolC8t51167H Brassica oleracea HOM05D006036 ORTHO05D007736 1.4e-63 246.9 165 76.4
Sp5g02440 Schrenkiella parvula HOM05D006036 ORTHO05D007736 1.8e-63 246.5 165 76.4
Carub.0005s2756 Capsella rubella HOM05D006036 ORTHO05D007736 2.4e-63 246.1 219 64.4
SEGI_01363 Sequoiadendron giganteum HOM05D006036 ORTHO05D007736 2.4e-63 246.1 163 71.2
Atru.chr5.310 Acer truncatum HOM05D006036 ORTHO05D007736 3.1e-63 245.7 147 81.6
BcaC07g40602 Brassica carinata HOM05D006036 ORTHO05D007736 4.1e-63 245.4 165 75.8
C08p35770 Brassica napus HOM05D006036 ORTHO05D007736 4.1e-63 245.4 165 75.8
CARHR171200 Cardamine hirsuta HOM05D006036 ORTHO05D007736 5.3e-63 245.0 221 61.5
AL5G43130 Arabidopsis lyrata HOM05D006036 ORTHO05D007736 9.1e-63 244.2 165 75.8
AT3G60810 Arabidopsis thaliana HOM05D006036 ORTHO05D007736 9.1e-63 244.2 221 62.0
Zm00001eb210410 Zea mays HOM05D006036 ORTHO05D007736 1.6e-62 243.4 167 67.1
BcaC07g42642 Brassica carinata HOM05D006036 ORTHO05D007736 3.5e-62 242.3 165 74.5
Thhalv10006234m.g Eutrema salsugineum HOM05D006036 ORTHO05D007736 1.3e-61 240.4 218 62.8
Aa31LG10G15050 Aethionema arabicum HOM05D006036 ORTHO05D007736 2.9e-61 239.2 219 61.2
Medtr7g074920 Medicago truncatula HOM05D006036 ORTHO05D007736 8.5e-61 237.7 163 66.9
arahy.Tifrunner.gnm1.ann1.Y8TVDJ Arachis hypogaea HOM05D006036 ORTHO05D007736 1.5e-60 236.9 155 72.9
Os03g0858700 Oryza sativa ssp. japonica HOM05D006036 ORTHO05D007736 4.2e-60 235.3 167 67.1
THA.LOC104802443 Tarenaya hassleriana HOM05D006036 ORTHO05D007736 4.2e-60 235.3 224 59.4
FAN10G0738 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.6e-59 233.4 151 74.8
ATR0810G113 Amborella trichopoda HOM05D006036 ORTHO05D007736 2.7e-59 232.6 156 71.2
AagrBONN_evm.TU.Sc2ySwM_117.1558 Anthoceros agrestis HOM05D006036 ORTHO05D007736 3.1e-55 219.2 163 64.4
Hma1.2p1_1122F.1_g259290 Hydrangea macrophylla HOM05D006036 ORTHO05D007736 4.1e-55 218.8 167 66.5
SMO143G0045 Selaginella moellendorffii HOM05D006036 ORTHO05D007736 5.0e-53 211.8 151 65.6
Mapoly0007s0216 Marchantia polymorpha HOM05D006036 ORTHO05D007736 1.5e-52 210.3 160 60.6
Pp3c23_9860 Physcomitrium patens HOM05D006036 ORTHO05D007736 1.4e-50 203.8 160 60.6
PSO782G0421 Papaver somniferum HOM05D006036 ORTHO05D007736 2.0e-49 199.9 168 60.1
Gohir.D08G155400 Gossypium hirsutum HOM05D006036 ORTHO05D007736 2.2e-48 196.4 177 60.5
VMungo0251G0926 Vigna mungo HOM05D006036 ORTHO05D007736 3.7e-48 195.7 165 60.0
PSO478G2400 Papaver somniferum HOM05D006036 ORTHO05D007736 1.4e-47 193.7 168 58.3
Nitab4.5_0000457g0290 Nicotiana tabacum HOM05D006036 ORTHO05D007736 9.2e-47 191.0 210 51.9
Peaxi162Scf00021g01720 Petunia axillaris HOM05D006036 ORTHO05D007736 1.3e-45 187.2 110 80.9
VMungo0331G0186 Vigna mungo HOM05D006036 ORTHO05D007736 8.6e-45 184.5 193 51.8
SGA_v2.0_scaffold153G37014 Striga asiatica HOM05D006036 ORTHO05D001464 1.2e-43 180.6 157 58.0
CAN.G388.12 Capsicum annuum HOM05D006036 ORTHO05D007736 4.7e-43 178.7 108 76.9
ClCG06G000370 Citrullus lanatus HOM05D006036 ORTHO05D007736 4.9e-40 168.7 154 60.4
MELO3C035247.2 Cucumis melo HOM05D006036 ORTHO05D007736 5.4e-39 165.2 113 73.5
COL.COLO4_12549 Corchorus olitorius HOM05D006036 ORTHO05D007736 7.0e-39 164.9 169 55.6
Cre11.g468750 Chlamydomonas reinhardtii HOM05D006036 ORTHO05D007736 9.2e-39 164.5 165 50.9
FAN06G1700 Fragaria x ananassa HOM05D006036 ORTHO05D007736 2.3e-34 149.8 95 78.9
Glyma.09G269100 Glycine max HOM05D006036 ORTHO05D007736 2.0e-33 146.7 105 65.7
Ca_07819_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 6.0e-30 135.2 95 67.4
Lalb_Chr03g0039561 Lupinus albus HOM05D006036 ORTHO05D007736 7.8e-30 134.8 109 56.9
MCO13G087 Micromonas commoda HOM05D006036 ORTHO05D007736 1.1e-28 131.0 173 42.8
Ca_19909_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 1.5e-28 130.6 79 68.4
Migut.N01635 Erythranthe guttata HOM05D006036 ORTHO05D007736 2.5e-28 129.8 83 72.3
FAN06G2896 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.2e-27 127.5 76 80.3
CBR_g54966 Chara braunii HOM05D006036 ORTHO05D007736 2.8e-27 126.3 83 71.1
Ciclev10033315m.g Citrus clementina HOM05D006036 ORTHO05D007736 3.1e-26 122.9 143 53.1
Gorai.007G091200 Gossypium raimondii HOM05D001611 ORTHO05D001464 7.5e-25 118.2 90 64.4
Gohir.D11G085366 Gossypium hirsutum HOM05D001611 ORTHO05D001464 1.1e-23 114.4 90 62.2
MELO3C034959.2 Cucumis melo HOM05D006036 ORTHO05D007736 6.0e-22 108.6 55 87.3
Lalb_Chr03g0039551 Lupinus albus HOM05D006036 ORTHO05D007736 1.2e-19 100.9 69 68.1
Lj1g0011795 Lotus japonicus HOM05D006036 ORTHO05D007736 5.8e-17 92.0 53 79.2
Psat3g116040 Pisum sativum HOM05D006036 ORTHO05D007736 7.1e-15 85.1 53 71.7
arahy.Tifrunner.gnm1.ann1.WD24C8 Arachis hypogaea HOM05D006036 ORTHO05D007736 6.6e-13 78.6 54 64.8
arahy.Tifrunner.gnm1.ann1.BW32E7 Arachis hypogaea HOM05D006036 ORTHO05D000587 2.4e-10 70.1 53 60.4
Gorai.004G161600 Gossypium raimondii HOM05D006036 ORTHO05D007736 3.4e-09 66.2 67 56.7
Pp3c13_20640 Physcomitrium patens HOM05D020894 ORTHO05D021334 1.2e-06 57.8 147 32.7

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (3 genes)
Citrullus lanatus (1 genes)
Citrus clementina (2 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (5 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (3 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (0 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings