Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010861 Camellia sinensis var. sinensis HOM05D004847 ORTHO05D005856 1.1e-182 643.3 336 100.0
Actinidia24643 Actinidia chinensis HOM05D004847 ORTHO05D005856 1.5e-120 436.8 357 70.9
QL03p006978 Quercus lobata HOM05D004847 ORTHO05D005856 8.3e-119 431.0 345 70.4
Thecc.05G303800 Theobroma cacao HOM05D004847 ORTHO05D005856 8.3e-119 431.0 352 69.9
Cc11_g03560 Coffea canephora HOM05D004847 ORTHO05D005856 1.6e-117 426.8 350 70.3
Dinv23942 Davidia involucrata HOM05D004847 ORTHO05D005856 1.3e-116 423.7 351 72.6
vmacro19624 Vaccinium macrocarpon HOM05D004847 ORTHO05D005856 3.8e-116 422.2 351 73.5
Gohir.A11G264800 Gossypium hirsutum HOM05D004847 ORTHO05D005856 1.5e-115 420.2 374 64.7
COL.COLO4_13475 Corchorus olitorius HOM05D004847 ORTHO05D005856 1.9e-115 419.9 356 69.9
Gohir.D11G275000 Gossypium hirsutum HOM05D004847 ORTHO05D005856 3.2e-115 419.1 374 64.7
Gorai.007G296800 Gossypium raimondii HOM05D004847 ORTHO05D005856 3.2e-115 419.1 374 64.7
TAR633G0229 Trochodendron aralioides HOM05D004847 ORTHO05D005856 9.4e-115 417.5 334 71.9
Potri.013G022600 Populus trichocarpa HOM05D004847 ORTHO05D005856 1.2e-114 417.2 363 67.8
Prupe.6G326100 Prunus persica HOM05D004847 ORTHO05D005856 1.2e-114 417.2 358 68.2
TAR362G0189 Trochodendron aralioides HOM05D004847 ORTHO05D005856 8.8e-113 411.0 349 68.2
TWI56G1294 Tripterygium wilfordii HOM05D004847 ORTHO05D005856 1.5e-112 410.2 348 67.5
Sabra05G0035400 Salix brachista HOM05D004847 ORTHO05D005856 3.4e-112 409.1 351 67.2
Hma1.2p1_0928F.1_g237810 Hydrangea macrophylla HOM05D004847 ORTHO05D005856 4.4e-112 408.7 346 70.5
Potri.005G033200 Populus trichocarpa HOM05D004847 ORTHO05D005856 1.7e-111 406.8 352 66.8
Gorai.004G241800 Gossypium raimondii HOM05D004847 ORTHO05D005856 2.2e-111 406.4 350 68.9
Duzib106G0633 Durio zibethinus HOM05D004847 ORTHO05D005856 1.6e-109 400.2 379 61.7
Nn4g26247 Nelumbo nucifera HOM05D004847 ORTHO05D005856 4.5e-109 398.7 338 68.9
GSVIVG01000048001 Vitis vinifera HOM05D004847 ORTHO05D005856 7.7e-109 397.9 345 68.7
Gohir.A08G210800 Gossypium hirsutum HOM05D004847 ORTHO05D005856 1.0e-108 397.5 350 68.0
SalBow3G4161 Salvia bowleyana HOM05D004847 ORTHO05D005856 3.8e-108 395.6 347 64.8
Atru.chr2.410 Acer truncatum HOM05D004847 ORTHO05D005856 2.5e-107 392.9 375 63.2
CSS0017838 Camellia sinensis var. sinensis HOM05D004847 ORTHO05D005856 1.6e-106 390.2 346 68.8
Manes.09G166900 Manihot esculenta HOM05D004847 ORTHO05D005856 2.8e-106 389.4 363 64.2
RcHm_v2.0_Chr3g0454731 Rosa chinensis HOM05D004847 ORTHO05D005856 8.0e-106 387.9 364 63.5
Eucgr.L01544 Eucalyptus grandis HOM05D004847 ORTHO05D005856 5.2e-105 385.2 352 65.3
FAN05G5722 Fragaria x ananassa HOM05D004847 ORTHO05D005856 2.0e-104 383.3 365 62.5
Sabra13G0024700 Salix brachista HOM05D004847 ORTHO05D005856 4.4e-104 382.1 337 67.1
FAN05G5436 Fragaria x ananassa HOM05D004847 ORTHO05D005856 5.7e-104 381.7 365 62.2
Duzib128G0091 Durio zibethinus HOM05D004847 ORTHO05D005856 1.7e-103 380.2 327 67.6
MD12G1219500 Malus domestica HOM05D004847 ORTHO05D005856 1.1e-102 377.5 365 63.8
Lj5A533T17 Lonicera japonica HOM05D004847 ORTHO05D005856 1.8e-102 376.7 361 63.4
Ciclev10003680m.g Citrus clementina HOM05D004847 ORTHO05D001311 3.1e-102 375.9 386 60.6
CiPaw.08G164900 Carya illinoinensis HOM05D004847 ORTHO05D005856 5.4e-102 375.2 368 61.7
PSO832G1768 Papaver somniferum HOM05D004847 ORTHO05D005856 1.6e-101 373.6 348 63.5
TWI12G0805 Tripterygium wilfordii HOM05D004847 ORTHO05D005856 1.6e-101 373.6 348 62.9
Nitab4.5_0003156g0010 Nicotiana tabacum HOM05D004847 ORTHO05D005856 2.7e-101 372.9 390 59.7
DCAR_003332 Daucus carota HOM05D004847 ORTHO05D005856 5.9e-101 371.7 353 64.0
FvH4_6g05820 Fragaria vesca HOM05D004847 ORTHO05D005856 1.0e-100 370.9 365 61.4
FAN14G3900 Fragaria x ananassa HOM05D004847 ORTHO05D005856 1.0e-100 370.9 365 61.4
Nitab4.5_0000137g0030 Nicotiana tabacum HOM05D004847 ORTHO05D005856 1.3e-100 370.5 397 59.2
Haze_04198 Corylus avellana HOM05D004847 ORTHO05D005856 2.3e-100 369.8 346 63.0
CiPaw.07G017600 Carya illinoinensis HOM05D004847 ORTHO05D005856 3.9e-100 369.0 325 66.5
Peaxi162Scf00037g00632 Petunia axillaris HOM05D004847 ORTHO05D005856 6.6e-100 368.2 408 57.4
Ca_10113_v3 Cicer arietinum L. HOM05D004847 ORTHO05D005856 1.9e-99 366.7 363 61.4
PSO210G5284 Papaver somniferum HOM05D004847 ORTHO05D005856 8.0e-98 361.3 347 62.8
CAN.G1034.25 Capsicum annuum HOM05D004847 ORTHO05D005856 1.4e-97 360.5 458 51.7
Oeu017487.1 Olea europaea HOM05D004847 ORTHO05D005856 2.3e-97 359.8 329 65.3
MD04G1205400 Malus domestica HOM05D004847 ORTHO05D005856 1.5e-96 357.1 364 60.4
Phvul.007G179800 Phaseolus vulgaris HOM05D004847 ORTHO05D005856 4.4e-96 355.5 383 57.7
Migut.B01038 Erythranthe guttata HOM05D004847 ORTHO05D005856 5.8e-96 355.1 336 62.8
CANSAT54G0893 Cannabis sativa HOM05D004847 ORTHO05D005856 7.5e-96 354.8 367 59.9
Aqoxy5G00505 Aquilegia oxysepala HOM05D004847 ORTHO05D005856 1.3e-95 354.0 365 59.5
Glyma.10G154100 Glycine max HOM05D004847 ORTHO05D005856 9.2e-94 347.8 386 55.4
Hund07068 Selenicereus undatus HOM05D004847 ORTHO05D005856 9.2e-94 347.8 360 60.3
PGSC0003DMG401024742 Solanum tuberosum HOM05D004847 ORTHO05D005856 1.2e-93 347.4 443 51.5
Gohir.D08G227600 Gossypium hirsutum HOM05D004847 ORTHO05D005856 1.3e-92 344.0 281 71.2
arahy.Tifrunner.gnm1.ann1.WTPV8B Arachis hypogaea HOM05D004847 ORTHO05D005856 3.0e-92 342.8 392 55.4
arahy.Tifrunner.gnm1.ann1.91A0PW Arachis hypogaea HOM05D004847 ORTHO05D005856 5.0e-92 342.0 391 55.2
MBI19_g05601_MAGBIO Magnolia biondii HOM05D004847 ORTHO05D005856 6.6e-92 341.7 354 60.7
Rhsim05G0141800 Rhododendron simsii HOM05D004847 ORTHO05D005856 1.1e-91 340.9 352 62.5
MSTRG.27999 Avicennia marina HOM05D004847 ORTHO05D005856 1.5e-91 340.5 299 64.2
Actinidia28666 Actinidia chinensis HOM05D004847 ORTHO05D005856 2.5e-91 339.7 340 62.9
Migut.N02003 Erythranthe guttata HOM05D004847 ORTHO05D005856 4.3e-91 339.0 367 59.7
Solyc01g099270.2 Solanum lycopersicum HOM05D004847 ORTHO05D005856 5.6e-91 338.6 475 48.2
VMungo0720G3140 Vigna mungo HOM05D004847 ORTHO05D005856 9.5e-91 337.8 357 58.3
Psat0s3135g0240 Pisum sativum HOM05D004847 ORTHO05D005856 2.1e-90 336.7 388 54.6
PGR083G0144 Punica granatum HOM05D004847 ORTHO05D005856 2.8e-90 336.3 364 58.0
THA.LOC104818696 Tarenaya hassleriana HOM05D004847 ORTHO05D005856 3.6e-90 335.9 410 54.1
Glyma.20G234200 Glycine max HOM05D004847 ORTHO05D005856 4.7e-90 335.5 376 55.6
Lsat_1_v5_gn_9_123520 Lactuca sativa HOM05D004847 ORTHO05D005856 4.7e-90 335.5 353 58.1
Sopen01g042820 Solanum pennellii HOM05D004847 ORTHO05D005856 1.4e-89 334.0 475 47.8
Lalb_Chr04g0260731 Lupinus albus HOM05D004847 ORTHO05D005856 2.6e-88 329.7 329 59.9
CsaV3_2G005250 Cucumis sativus L. HOM05D004847 ORTHO05D005856 7.5e-88 328.2 402 54.2
Migut.O00711 Erythranthe guttata HOM05D004847 ORTHO05D005856 8.3e-87 324.7 368 59.0
MELO3C004268.2 Cucumis melo HOM05D004847 ORTHO05D005856 1.1e-86 324.3 403 52.4
Sc16g0008460 Simmondsia chinensis HOM05D004847 ORTHO05D005856 4.1e-86 322.4 375 54.9
DCAR_029413 Daucus carota HOM05D004847 ORTHO05D005856 1.6e-85 320.5 362 55.5
AUR62005144 Chenopodium quinoa HOM05D004847 ORTHO05D005856 1.3e-84 317.4 361 54.8
AUR62000830 Chenopodium quinoa HOM05D004847 ORTHO05D005856 1.1e-83 314.3 361 54.8
HanXRQChr09g0248411 Helianthus annuus HOM05D004847 ORTHO05D005856 1.9e-83 313.5 371 55.5
ECA240G3864 Erigeron canadensis HOM05D004847 ORTHO05D005856 2.5e-83 313.2 337 59.6
Sed0004129 Sechium edule HOM05D004847 ORTHO05D005856 2.3e-81 306.6 426 48.8
EL10Ac4g09352 Beta vulgaris HOM05D004847 ORTHO05D005856 1.2e-80 304.3 352 54.0
Lalb_Chr02g0148231 Lupinus albus HOM05D004847 ORTHO05D005856 2.6e-80 303.1 374 52.4
Medtr7g113510 Medicago truncatula HOM05D004847 ORTHO05D005856 1.4e-78 297.4 417 48.2
ClCG02G015810 Citrullus lanatus HOM05D000141 ORTHO05D001311 7.8e-77 291.6 340 56.5
BraSC132t45510Z Brassica rapa HOM05D004847 ORTHO05D005856 3.0e-76 289.7 440 47.5
Ah.06g189340 Amaranthus hybridus HOM05D004847 ORTHO05D005856 6.6e-76 288.5 363 52.1
BNapus_Darmor_BZH_scaffold_114p00170 Brassica napus HOM05D004847 ORTHO05D005856 6.6e-76 288.5 443 46.7
Lj5g0019148 Lotus japonicus HOM05D004847 ORTHO05D005856 4.3e-75 285.8 440 46.8
BraA05t23024Z Brassica rapa HOM05D004847 ORTHO05D005856 5.6e-75 285.4 444 45.5
A05p42290 Brassica napus HOM05D004847 ORTHO05D005856 9.5e-75 284.6 445 45.4
BolC1t05700H Brassica oleracea HOM05D004847 ORTHO05D005856 2.1e-74 283.5 442 46.8
AL3G15780 Arabidopsis lyrata HOM05D004847 ORTHO05D005856 1.5e-72 277.3 473 44.0
TPR.G33190 Trifolium pratense HOM05D004847 ORTHO05D005856 3.4e-72 276.2 461 43.2
BolC5t34847H Brassica oleracea HOM05D004847 ORTHO05D005856 4.9e-71 272.3 439 45.6
Thhalv10020613m.g Eutrema salsugineum HOM05D004847 ORTHO05D005856 8.4e-71 271.6 475 43.6
C05p61870 Brassica napus HOM05D004847 ORTHO05D005856 1.1e-70 271.2 440 45.2
Carub.0003s0461 Capsella rubella HOM05D004847 ORTHO05D005856 2.1e-69 266.9 475 43.6
CARHR079680 Cardamine hirsuta HOM05D004847 ORTHO05D005856 2.7e-69 266.5 474 43.0
AT3G05330 Arabidopsis thaliana HOM05D004847 ORTHO05D005856 6.0e-69 265.4 370 48.4
CDE10G0375 Ceratophyllum demersum HOM05D004847 ORTHO05D005856 1.3e-68 264.2 325 50.2
Sp3g04200 Schrenkiella parvula HOM05D004847 ORTHO05D005856 1.9e-67 260.4 470 43.6
Glyma.19G235300 Glycine max HOM05D004847 ORTHO05D005856 3.6e-66 256.1 336 50.9
HPP92_003277 Vanilla planifolia HOM05D004847 ORTHO05D005856 3.6e-66 256.1 345 49.3
Medtr1g082940 Medicago truncatula HOM05D004847 ORTHO05D005856 1.1e-65 254.6 325 51.1
Aa31LG5G15720 Aethionema arabicum HOM05D000141 ORTHO05D001311 9.0e-65 251.5 425 43.8
TPR.G11389 Trifolium pratense HOM05D004847 ORTHO05D005856 5.8e-64 248.8 277 59.2
Cpa.g.sc48.48 Carica papaya HOM05D004847 ORTHO05D005856 1.2e-61 241.1 279 58.1
Phvul.006G091600 Phaseolus vulgaris HOM05D004847 ORTHO05D005856 1.3e-60 237.7 393 45.8
BcaC05g30136 Brassica carinata HOM05D004847 ORTHO05D005856 1.3e-58 231.1 318 50.6
Zm00001eb286860 Zea mays HOM05D004847 ORTHO05D005856 1.6e-58 230.7 410 42.7
SGA_v2.0_scaffold81G26072 Striga asiatica HOM05D004847 ORTHO05D005856 1.3e-55 221.1 372 48.4
CDE10G0883 Ceratophyllum demersum HOM05D004847 ORTHO05D005856 6.0e-53 212.2 417 39.6
ATR0626G214 Amborella trichopoda HOM05D004847 ORTHO05D005856 3.9e-52 209.5 370 43.5
BcaC05g30154 Brassica carinata HOM05D004847 ORTHO05D005856 4.8e-50 202.6 247 53.4
Ca_09350_v3 Cicer arietinum L. HOM05D004847 ORTHO05D005856 4.8e-50 202.6 315 46.7
Glyma.03G237700 Glycine max HOM05D004847 ORTHO05D005856 3.4e-48 196.4 316 45.9
SGA_v2.0_scaffold80G25911 Striga asiatica HOM05D004847 ORTHO05D005856 3.8e-47 193.0 336 45.8
VMungo0540G0069 Vigna mungo HOM05D004847 ORTHO05D005856 3.8e-47 193.0 315 45.4
Manes.08G120800 Manihot esculenta HOM05D004847 ORTHO05D005856 2.8e-42 176.8 358 41.6
TPR.G6113 Trifolium pratense HOM05D006420 ORTHO05D008009 5.3e-41 172.6 117 76.1
Psat0s212g0040 Pisum sativum HOM05D004847 ORTHO05D005856 4.6e-37 159.5 343 39.7
Os02g0459300 Oryza sativa ssp. japonica HOM05D004847 ORTHO05D005856 1.5e-35 154.5 332 38.9
CDE10G0745 Ceratophyllum demersum HOM05D004847 ORTHO05D005856 4.6e-29 132.9 102 68.6
Actinidia19789 Actinidia chinensis HOM05D004847 ORTHO05D005856 1.7e-23 114.4 82 76.8
Cpa.g.sc48.49 Carica papaya HOM05D004847 ORTHO05D005856 2.5e-22 110.5 64 84.4
Zm00001eb269750 Zea mays HOM05D004847 ORTHO05D005856 1.8e-20 104.4 269 35.7
Gohir.D12G153350 Gossypium hirsutum HOM05D004847 ORTHO05D005856 8.8e-20 102.1 67 74.6
GSVIVG01000050001 Vitis vinifera HOM05D000141 ORTHO05D001311 1.5e-19 101.3 84 63.1
MD00G1120700 Malus domestica HOM05D004847 ORTHO05D005856 5.7e-19 99.4 67 73.1
MD02G1275700 Malus domestica HOM05D004847 ORTHO05D005856 7.4e-19 99.0 67 71.6
SEGI_00809 Sequoiadendron giganteum HOM05D004847 ORTHO05D005856 9.7e-19 98.6 217 36.9
Gorai.004G124500 Gossypium raimondii HOM05D004847 ORTHO05D005856 4.8e-18 96.3 71 66.2
SHI18142 Sapria himalayana HOM05D000141 ORTHO05D001311 1.2e-16 91.7 327 33.6
Ca_09354_v3 Cicer arietinum L. HOM05D004847 ORTHO05D005856 1.7e-15 87.8 66 68.2
Psat3g073720 Pisum sativum HOM05D004847 ORTHO05D005856 1.1e-14 85.1 153 42.5
Gohir.D08G115550 Gossypium hirsutum HOM05D004847 ORTHO05D005856 4.2e-14 83.2 56 73.2
SEGI_03169 Sequoiadendron giganteum HOM05D004847 ORTHO05D005856 4.7e-13 79.7 175 39.4
Zm00001eb092520 Zea mays HOM05D004847 ORTHO05D005856 4.7e-13 79.7 179 41.9
Lsat_1_v5_gn_8_18301 Lactuca sativa HOM05D004847 ORTHO05D005856 2.3e-12 77.4 101 50.5
C05p10080 Brassica napus HOM05D004847 ORTHO05D005856 2.0e-11 74.3 226 36.7
Gohir.A10G185000 Gossypium hirsutum HOM05D000639 ORTHO05D020118 5.3e-09 66.2 52 71.2
Gohir.A01G045000 Gossypium hirsutum HOM05D004847 ORTHO05D005856 7.0e-09 65.9 52 71.2
Gohir.D04G107600 Gossypium hirsutum HOM05D004847 ORTHO05D005856 7.0e-09 65.9 52 71.2
Gohir.D09G147300 Gossypium hirsutum HOM05D004847 ORTHO05D005856 7.0e-09 65.9 52 71.2
Gohir.D10G096100 Gossypium hirsutum HOM05D004847 ORTHO05D005856 7.0e-09 65.9 52 71.2
Gohir.D07G076600 Gossypium hirsutum HOM05D000639 ORTHO05D020118 1.6e-08 64.7 52 69.2
Gohir.D10G149400 Gossypium hirsutum HOM05D000639 ORTHO05D020118 2.0e-08 64.3 52 69.2
Gohir.D05G046500 Gossypium hirsutum HOM05D004847 ORTHO05D005856 2.9e-07 60.5 52 67.3

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (3 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (3 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (4 genes)
Gossypium hirsutum (14 genes)
Gossypium raimondii (3 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (4 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (3 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (2 genes)
Zea mays (3 genes)

Program Settings