Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 5.3e-122 441.0 222 100.0
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.8e-115 418.7 239 90.0
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.2e-113 413.3 239 88.7
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 3.5e-102 375.2 241 80.5
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 3.5e-102 375.2 232 81.9
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 5.7e-100 367.9 261 75.1
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 6.3e-99 364.4 230 78.3
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 8.2e-99 364.0 231 79.7
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 1.8e-98 362.8 237 78.1
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 1.8e-98 362.8 231 78.8
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 2.4e-98 362.5 233 79.0
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 9.0e-98 360.5 239 75.7
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 2.0e-97 359.4 234 76.5
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 2.0e-97 359.4 230 78.3
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 2.6e-97 359.0 239 76.2
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 3.4e-97 358.6 234 76.1
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 1.3e-96 356.7 235 76.6
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 1.3e-96 356.7 235 76.6
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 2.9e-96 355.5 239 75.7
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 8.5e-96 354.0 235 74.9
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 8.5e-96 354.0 235 74.9
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 1.1e-95 353.6 235 74.5
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 1.9e-95 352.8 239 74.1
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 1.9e-95 352.8 232 76.3
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 2.5e-95 352.4 234 75.6
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 3.2e-95 352.1 239 75.7
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 9.4e-95 350.5 235 74.9
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 9.4e-95 350.5 233 76.4
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 1.2e-94 350.1 220 80.9
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 1.2e-94 350.1 232 75.9
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 2.1e-94 349.4 233 75.5
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 2.1e-94 349.4 234 75.6
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 2.7e-94 349.0 247 72.5
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 6.1e-94 347.8 233 75.1
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 1.0e-93 347.1 230 75.7
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 1.4e-93 346.7 239 73.6
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 1.8e-93 346.3 235 71.9
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 1.8e-93 346.3 242 74.0
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 3.0e-93 345.5 232 75.4
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 3.9e-93 345.1 233 73.8
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 3.9e-93 345.1 228 73.2
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 8.8e-93 344.0 234 71.8
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 1.1e-92 343.6 233 73.0
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 1.5e-92 343.2 232 72.4
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 2.5e-92 342.4 232 72.4
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 2.5e-92 342.4 231 71.9
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.5e-92 342.4 234 74.4
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 3.3e-92 342.0 239 72.4
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 4.3e-92 341.7 232 74.1
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 4.3e-92 341.7 231 74.5
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 7.4e-92 340.9 232 72.0
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 7.4e-92 340.9 231 71.4
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 7.4e-92 340.9 252 70.6
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 1.3e-91 340.1 237 72.2
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 1.7e-91 339.7 269 66.9
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.2e-91 339.3 234 73.5
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 2.8e-91 339.0 232 71.6
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 8.2e-91 337.4 234 70.9
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 1.1e-90 337.0 247 69.6
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 1.4e-90 336.7 234 69.7
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 3.1e-90 335.5 228 71.1
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 3.1e-90 335.5 228 71.1
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 3.1e-90 335.5 228 71.1
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 2.6e-89 332.4 230 71.7
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 2.6e-89 332.4 233 70.0
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 7.7e-89 330.9 233 70.0
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 7.7e-89 330.9 233 70.0
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.7e-88 329.7 233 70.0
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 3.8e-88 328.6 234 71.4
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 5.0e-88 328.2 225 73.8
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 6.5e-88 327.8 220 73.2
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 8.5e-88 327.4 226 70.4
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.1e-87 327.0 186 86.0
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 2.5e-87 325.9 232 69.4
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 4.7e-86 321.6 234 69.2
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 1.8e-85 319.7 231 68.4
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 1.8e-85 319.7 234 68.4
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 5.1e-85 318.2 186 83.9
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 8.8e-85 317.4 233 67.4
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 2.0e-84 316.2 233 66.1
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 7.4e-84 314.3 259 67.2
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 8.2e-83 310.8 256 62.5
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 1.1e-82 310.5 235 68.1
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 2.9e-80 302.4 277 58.5
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 5.0e-80 301.6 224 66.1
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 1.1e-79 300.4 224 66.5
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 1.5e-79 300.1 233 67.0
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.2e-79 298.9 224 66.1
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 4.4e-76 288.5 180 76.1
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 7.5e-76 287.7 246 60.6
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.4e-74 282.7 255 58.0
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 5.9e-73 278.1 191 71.7
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 7.7e-73 277.7 155 85.2
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 2.2e-72 276.2 239 65.3
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 4.2e-71 271.9 192 73.4
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 5.5e-71 271.6 192 70.8
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 4.0e-69 265.4 191 71.7
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 1.2e-68 263.8 227 58.6
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 4.4e-68 261.9 222 59.9
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 8.3e-67 257.7 284 50.7
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 1.0e-64 250.8 182 70.3
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 3.2e-63 245.7 191 68.6
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.2e-62 243.8 171 74.3
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 1.6e-62 243.4 182 68.1
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 1.6e-62 243.4 182 68.1
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 2.1e-62 243.0 162 71.0
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 6.1e-62 241.5 149 79.2
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 2.3e-61 239.6 234 52.6
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 2.7e-57 226.1 220 51.8
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 2.8e-54 216.1 222 50.5
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 9.8e-52 207.6 221 47.1
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 3.0e-40 169.5 147 60.5
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 8.9e-37 157.9 143 60.1
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 1.1e-34 151.0 119 65.5
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 1.2e-30 137.5 118 62.7
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 8.9e-29 131.3 90 72.2
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.5e-28 130.6 96 77.1
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 6.4e-27 125.2 86 70.9
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 1.1e-26 124.4 61 96.7
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 3.9e-24 115.9 71 74.6
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 6.2e-22 108.6 55 89.1
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 4.9e-19 99.0 109 56.0
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 9.6e-15 84.7 152 34.2
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 5.4e-10 68.9 72 52.8
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 1.6e-09 67.4 50 66.0

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (3 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (5 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (3 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings