Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010099 Camellia sinensis var. sinensis HOM05D004764 ORTHO05D005580 9.1e-168 593.6 318 100.0
CSS0016003 Camellia sinensis var. sinensis HOM05D004764 ORTHO05D005580 2.2e-166 589.0 318 99.1
vmacro01597 Vaccinium macrocarpon HOM05D004764 ORTHO05D005580 3.5e-143 511.9 318 84.6
Dinv20933 Davidia involucrata HOM05D004764 ORTHO05D005580 4.5e-143 511.5 318 85.5
Dinv21011 Davidia involucrata HOM05D004764 ORTHO05D005580 4.5e-143 511.5 318 85.5
Rhsim09G0171300 Rhododendron simsii HOM05D004764 ORTHO05D005580 5.6e-141 504.6 362 76.2
Lj1A432T27 Lonicera japonica HOM05D004764 ORTHO05D005580 6.0e-135 484.6 318 81.8
QL07p043722 Quercus lobata HOM05D004764 ORTHO05D005580 6.0e-135 484.6 317 81.4
Lj1C949T1 Lonicera japonica HOM05D004764 ORTHO05D005580 6.6e-134 481.1 318 81.8
GSVIVG01016388001 Vitis vinifera HOM05D004764 ORTHO05D005580 8.0e-132 474.2 318 78.6
Migut.F01566 Erythranthe guttata HOM05D004764 ORTHO05D005580 4.0e-131 471.9 319 78.1
Cfa017589 Carpinus fangiana HOM05D004764 ORTHO05D005580 5.2e-131 471.5 318 78.6
TWI73G0601 Tripterygium wilfordii HOM05D004764 ORTHO05D005580 1.2e-130 470.3 318 78.6
TWI09G1390 Tripterygium wilfordii HOM05D004764 ORTHO05D005580 1.5e-130 469.9 318 79.2
MSTRG.8305 Avicennia marina HOM05D004764 ORTHO05D005580 3.4e-130 468.8 318 76.7
PGSC0003DMG400006372 Solanum tuberosum HOM05D004764 ORTHO05D005580 2.9e-129 465.7 319 78.1
DCAR_011775 Daucus carota HOM05D004764 ORTHO05D005580 3.7e-129 465.3 318 76.1
Potri.010G194300 Populus trichocarpa HOM05D004764 ORTHO05D005580 4.9e-129 464.9 320 78.1
Prupe.2G152400 Prunus persica HOM05D004764 ORTHO05D005580 6.4e-129 464.5 318 76.7
Sopen03g006610 Solanum pennellii HOM05D004764 ORTHO05D005580 6.4e-129 464.5 318 77.7
TAR623G1788 Trochodendron aralioides HOM05D004764 ORTHO05D005580 6.4e-129 464.5 318 78.9
Nitab4.5_0012769g0010 Nicotiana tabacum HOM05D004764 ORTHO05D005580 8.3e-129 464.2 318 78.0
Sopen04g027710 Solanum pennellii HOM05D004764 ORTHO05D005580 1.1e-128 463.8 319 77.7
Solyc04g071730.3 Solanum lycopersicum HOM05D004764 ORTHO05D005580 1.4e-128 463.4 319 77.7
Manes.10G019100 Manihot esculenta HOM05D004764 ORTHO05D005580 1.9e-128 463.0 318 77.7
CAN.G308.66 Capsicum annuum HOM05D004764 ORTHO05D005580 2.4e-128 462.6 318 76.7
CiPaw.10G131000 Carya illinoinensis HOM05D004764 ORTHO05D005580 2.4e-128 462.6 318 78.3
HanXRQChr12g0369401 Helianthus annuus HOM05D004764 ORTHO05D005580 3.2e-128 462.2 318 76.7
COL.COLO4_25609 Corchorus olitorius HOM05D004764 ORTHO05D005580 5.4e-128 461.5 318 78.3
TAR369G1012 Trochodendron aralioides HOM05D004764 ORTHO05D005580 5.4e-128 461.5 318 78.6
Atru.chr12.285 Acer truncatum HOM05D004764 ORTHO05D005580 7.0e-128 461.1 318 77.7
Atru.chr12.324 Acer truncatum HOM05D004764 ORTHO05D005580 9.2e-128 460.7 318 77.4
CAN.G2159.1 Capsicum annuum HOM05D004764 ORTHO05D005580 9.2e-128 460.7 318 76.4
Cpa.g.sc19.234 Carica papaya HOM05D004764 ORTHO05D005580 1.2e-127 460.3 318 77.4
MD02G1196300 Malus domestica HOM05D004764 ORTHO05D005580 1.2e-127 460.3 318 76.7
Duzib106G0320 Durio zibethinus HOM05D004764 ORTHO05D005580 1.6e-127 459.9 318 77.7
Ciclev10032191m.g Citrus clementina HOM05D004764 ORTHO05D005580 2.0e-127 459.5 318 76.1
ECA233G3311 Erigeron canadensis HOM05D004764 ORTHO05D005580 3.5e-127 458.8 319 76.5
MD07G1124900 Malus domestica HOM05D004764 ORTHO05D005580 3.5e-127 458.8 318 75.8
Nitab4.5_0000344g0160 Nicotiana tabacum HOM05D004764 ORTHO05D005580 7.8e-127 457.6 318 76.7
SGA_v2.0_scaffold130G34221 Striga asiatica HOM05D004764 ORTHO05D005580 1.0e-126 457.2 318 75.2
Thecc.10G137500 Theobroma cacao HOM05D004764 ORTHO05D005580 3.0e-126 455.7 318 77.7
Ciclev10016032m.g Citrus clementina HOM05D004764 ORTHO05D005580 8.6e-126 454.1 318 75.8
Hund16007 Selenicereus undatus HOM05D004764 ORTHO05D005580 8.6e-126 454.1 318 77.7
Cc02_g20660 Coffea canephora HOM05D004764 ORTHO05D005580 1.1e-125 453.8 318 74.8
VMungo0464G2049 Vigna mungo HOM05D004764 ORTHO05D005580 1.5e-125 453.4 318 76.4
THA.LOC104816565 Tarenaya hassleriana HOM05D004764 ORTHO05D005580 1.9e-125 453.0 318 75.8
Phvul.004G157700 Phaseolus vulgaris HOM05D004764 ORTHO05D005580 3.3e-125 452.2 318 76.4
Gorai.011G278800 Gossypium raimondii HOM05D004764 ORTHO05D005580 7.3e-125 451.1 318 77.0
Gohir.A10G228400 Gossypium hirsutum HOM05D004764 ORTHO05D005580 2.1e-124 449.5 318 76.7
SalBow6G7043 Salvia bowleyana HOM05D004764 ORTHO05D005580 2.1e-124 449.5 318 73.9
Actinidia00927 Actinidia chinensis HOM05D004764 ORTHO05D005580 3.6e-124 448.7 319 79.3
CANSAT21G1253 Cannabis sativa HOM05D004764 ORTHO05D005580 3.6e-124 448.7 318 75.2
Lj2g0017902 Lotus japonicus HOM05D004764 ORTHO05D005580 6.2e-124 448.0 318 76.1
Glyma.09G184900 Glycine max HOM05D004764 ORTHO05D005580 8.1e-124 447.6 318 75.8
Medtr6g084580 Medicago truncatula HOM05D004764 ORTHO05D005580 8.1e-124 447.6 318 75.5
Lj1g0004796 Lotus japonicus HOM05D004764 ORTHO05D005580 4.0e-123 445.3 318 75.8
Psat1g037840 Pisum sativum HOM05D004764 ORTHO05D005580 1.2e-122 443.7 318 75.2
Ca_25497_v3 Cicer arietinum L. HOM05D004764 ORTHO05D005580 1.5e-122 443.4 318 74.8
EL10Ac2g04766 Beta vulgaris HOM05D004764 ORTHO05D005580 2.6e-122 442.6 318 75.5
PGR142G0534 Punica granatum HOM05D004764 ORTHO05D005580 9.9e-122 440.7 319 74.0
Peaxi162Scf00064g00126 Petunia axillaris HOM05D004764 ORTHO05D005580 1.3e-121 440.3 318 75.2
FAN10G3109 Fragaria x ananassa HOM05D004764 ORTHO05D005580 6.4e-121 438.0 318 72.6
FAN10G1216 Fragaria x ananassa HOM05D004764 ORTHO05D005580 1.1e-120 437.2 317 72.6
Peaxi162Scf00010g01114 Petunia axillaris HOM05D004764 ORTHO05D005580 1.1e-120 437.2 318 74.8
RcHm_v2.0_Chr1g0351821 Rosa chinensis HOM05D004764 ORTHO05D005580 1.4e-120 436.8 318 73.3
MELO3C008270.2 Cucumis melo HOM05D004764 ORTHO05D005580 7.1e-120 434.5 318 73.3
FvH4_7g12790 Fragaria vesca HOM05D004764 ORTHO05D005580 2.1e-119 433.0 318 72.0
Sed0006926 Sechium edule HOM05D004764 ORTHO05D005580 3.5e-119 432.2 318 73.3
Sp1g38390 Schrenkiella parvula HOM05D004764 ORTHO05D005580 3.0e-118 429.1 318 71.7
Eucgr.G03020 Eucalyptus grandis HOM05D004764 ORTHO05D005580 1.5e-117 426.8 318 72.6
CARHR041910 Cardamine hirsuta HOM05D004764 ORTHO05D005580 4.3e-117 425.2 318 71.1
Thhalv10011542m.g Eutrema salsugineum HOM05D004764 ORTHO05D005580 4.3e-117 425.2 318 71.4
Lsat_1_v5_gn_8_14200 Lactuca sativa HOM05D004764 ORTHO05D005580 4.3e-117 425.2 315 72.4
PSO585G0029 Papaver somniferum HOM05D004764 ORTHO05D005580 7.3e-117 424.5 319 70.8
Ah.16g104720 Amaranthus hybridus HOM05D004764 ORTHO05D005580 9.5e-117 424.1 318 71.1
arahy.Tifrunner.gnm1.ann1.BR1H5V Arachis hypogaea HOM05D004764 ORTHO05D005580 9.5e-117 424.1 318 72.0
Lalb_Chr14g0371191 Lupinus albus HOM05D004764 ORTHO05D005580 9.5e-117 424.1 318 72.3
AL1G59680 Arabidopsis lyrata HOM05D004764 ORTHO05D005580 1.6e-116 423.3 319 71.2
ClCG11G006420 Citrullus lanatus HOM05D004764 ORTHO05D005580 1.6e-116 423.3 319 72.4
Aa31LG10G3070 Aethionema arabicum HOM05D004764 ORTHO05D005580 2.1e-116 422.9 323 69.0
Lalb_Chr22g0353041 Lupinus albus HOM05D004764 ORTHO05D005580 2.1e-116 422.9 318 72.3
Ah.02g115950 Amaranthus hybridus HOM05D004764 ORTHO05D005580 8.1e-116 421.0 318 70.4
PSO384G2817 Papaver somniferum HOM05D004764 ORTHO05D005580 1.4e-115 420.2 319 71.2
Aqoxy7G01280 Aquilegia oxysepala HOM05D004764 ORTHO05D005580 3.1e-115 419.1 318 71.4
Aqoxy1G00756 Aquilegia oxysepala HOM05D004764 ORTHO05D005580 4.0e-115 418.7 319 70.5
AT1G51740 Arabidopsis thaliana HOM05D004764 ORTHO05D005580 4.0e-115 418.7 319 70.8
FAN01G0026 Fragaria x ananassa HOM05D004764 ORTHO05D005580 1.5e-114 416.8 353 64.6
BcaB02g11053 Brassica carinata HOM05D004764 ORTHO05D005580 2.6e-114 416.0 320 70.0
Carub.0001s4061 Capsella rubella HOM05D004764 ORTHO05D005580 4.4e-114 415.2 319 70.2
arahy.Tifrunner.gnm1.ann1.V0Z2W7 Arachis hypogaea HOM05D004764 ORTHO05D005580 4.9e-113 411.8 318 70.8
Gohir.D10G242400 Gossypium hirsutum HOM05D004764 ORTHO05D005580 2.3e-110 402.9 286 76.9
Solyc03g033850.3 Solanum lycopersicum HOM05D004764 ORTHO05D005580 5.1e-110 401.7 281 76.9
Haze_20561 Corylus avellana HOM05D004764 ORTHO05D005580 1.9e-109 399.8 270 78.9
Lsat_1_v5_gn_9_12660 Lactuca sativa HOM05D004764 ORTHO05D005580 5.6e-109 398.3 318 67.9
Zm00001eb429110 Zea mays HOM05D004764 ORTHO05D005580 5.6e-109 398.3 319 68.7
BcaB07g33630 Brassica carinata HOM05D004764 ORTHO05D005580 3.6e-108 395.6 305 70.2
CsaV3_6G001590 Cucumis sativus L. HOM05D004764 ORTHO05D005580 4.7e-108 395.2 293 73.0
Os04g0530400 Oryza sativa ssp. japonica HOM05D004764 ORTHO05D005580 8.1e-108 394.4 318 67.6
Os12g0154400 Oryza sativa ssp. japonica HOM05D004764 ORTHO05D005580 1.1e-107 394.0 318 67.3
BolC6t35797H Brassica oleracea HOM05D004764 ORTHO05D005580 3.1e-107 392.5 302 69.5
A06p02240 Brassica napus HOM05D004764 ORTHO05D005580 6.9e-107 391.3 302 69.5
BraA06t23434Z Brassica rapa HOM05D004764 ORTHO05D005580 2.6e-106 389.4 302 69.2
Sabra10G0149400 Salix brachista HOM05D004764 ORTHO05D005580 7.6e-106 387.9 304 69.4
unitig_0.g2163 Utricularia gibba HOM05D004764 ORTHO05D005580 1.7e-105 386.7 321 65.4
Lj1C433T7 Lonicera japonica HOM05D004764 ORTHO05D005580 3.2e-104 382.5 256 79.3
Oeu013001.1 Olea europaea HOM05D004764 ORTHO05D005580 1.6e-103 380.2 280 72.1
Sc11g0007530 Simmondsia chinensis HOM05D004764 ORTHO05D005580 1.7e-102 376.7 270 74.1
BcaC08g43344 Brassica carinata HOM05D004764 ORTHO05D005580 2.3e-102 376.3 294 69.0
C06p07040 Brassica napus HOM05D004764 ORTHO05D005580 2.5e-101 372.9 294 67.7
ATR0736G027 Amborella trichopoda HOM05D004764 ORTHO05D005580 5.6e-101 371.7 320 64.4
AUR62041843 Chenopodium quinoa HOM05D004764 ORTHO05D005580 7.6e-98 361.3 318 64.5
Nn5g27977 Nelumbo nucifera HOM05D004764 ORTHO05D005580 7.6e-98 361.3 318 66.4
FAN06G0806 Fragaria x ananassa HOM05D004764 ORTHO05D005580 1.7e-97 360.1 264 72.7
vmacro10073 Vaccinium macrocarpon HOM05D004764 ORTHO05D005580 1.7e-97 360.1 230 83.0
Glyma.07G091000 Glycine max HOM05D004764 ORTHO05D005580 3.8e-97 359.0 318 65.1
AUR62032348 Chenopodium quinoa HOM05D004764 ORTHO05D005580 6.0e-95 351.7 270 68.9
Lj1C435T9 Lonicera japonica HOM05D004764 ORTHO05D005580 2.5e-93 346.3 242 76.0
SEGI_31890 Sequoiadendron giganteum HOM05D004764 ORTHO05D005580 1.6e-92 343.6 322 61.2
SHI03532 Sapria himalayana HOM05D004764 ORTHO05D005580 3.7e-92 342.4 323 62.2
Nitab4.5_0011923g0010 Nicotiana tabacum HOM05D004764 ORTHO05D005580 1.2e-90 337.4 318 60.7
HPP92_027811 Vanilla planifolia HOM05D004764 ORTHO05D005580 3.1e-83 312.8 318 55.7
Potri.008G063100 Populus trichocarpa HOM05D004764 ORTHO05D005580 5.8e-82 308.5 229 70.3
Nitab4.5_0002828g0150 Nicotiana tabacum HOM05D004764 ORTHO05D005580 6.3e-76 288.5 391 49.4
TPR.G27934 Trifolium pratense HOM05D004764 ORTHO05D005580 1.7e-73 280.4 748 32.5
Mapoly0024s0083 Marchantia polymorpha HOM05D004764 ORTHO05D005580 1.8e-70 270.4 322 50.6
Pp3c6_24680 Physcomitrium patens HOM05D004764 ORTHO05D005580 1.8e-67 260.4 320 48.4
SMO356G0668 Selaginella moellendorffii HOM05D004764 ORTHO05D005580 3.2e-64 249.6 315 49.8
Oeu032670.1 Olea europaea HOM05D004764 ORTHO05D005580 1.5e-61 240.7 182 76.4
AagrBONN_evm.TU.Sc2ySwM_368.928 Anthoceros agrestis HOM05D004764 ORTHO05D005580 5.3e-59 232.3 298 48.7
Actinidia27825 Actinidia chinensis HOM05D004764 ORTHO05D005580 7.0e-59 231.9 150 86.7
CDE09G0086 Ceratophyllum demersum HOM05D004764 ORTHO05D005580 2.8e-52 209.9 193 63.7
C06p13300 Brassica napus HOM05D001194 ORTHO05D005580 6.1e-47 192.2 274 48.5
Zm00001eb427200 Zea mays HOM05D004764 ORTHO05D005580 6.7e-46 188.7 160 68.8
PGSC0003DMG400022548 Solanum tuberosum HOM05D004764 ORTHO05D005580 2.8e-44 183.3 122 83.6
PSO339G3467 Papaver somniferum HOM05D004764 ORTHO05D005580 1.3e-41 174.5 154 66.9
Glyma.17G199500 Glycine max HOM05D004764 ORTHO05D005580 1.1e-40 171.4 120 80.0
Sabra08G0046500 Salix brachista HOM05D004764 ORTHO05D005580 2.5e-40 170.2 252 43.7
HPP92_004405 Vanilla planifolia HOM05D004764 ORTHO05D005580 2.8e-36 156.8 115 64.3
BolC6t36490H Brassica oleracea HOM05D001194 ORTHO05D000015 1.8e-35 154.1 275 41.8
vmacro10891 Vaccinium macrocarpon HOM05D004764 ORTHO05D005580 7.2e-32 142.1 167 56.9
MCO05G144 Micromonas commoda HOM05D004764 ORTHO05D005580 9.5e-32 141.7 311 33.4
vmacro10074 Vaccinium macrocarpon HOM05D004764 ORTHO05D005580 8.0e-31 138.7 112 67.0
Eucgr.L03566 Eucalyptus grandis HOM05D004764 ORTHO05D005580 1.8e-30 137.5 91 74.7
Actinidia13909 Actinidia chinensis HOM05D004764 ORTHO05D005580 8.9e-30 135.2 111 70.3
BcaC08g43937 Brassica carinata HOM05D001194 ORTHO05D004786 7.0e-27 125.6 138 58.7
BcaC08g43936 Brassica carinata HOM05D004764 ORTHO05D005580 8.6e-25 118.6 100 60.0
CBR_g29687 Chara braunii HOM05D004764 ORTHO05D005580 1.9e-24 117.5 93 66.7
SEGI_41058 Sequoiadendron giganteum HOM05D004764 ORTHO05D005580 6.8e-22 109.0 89 60.7
Actinidia13908 Actinidia chinensis HOM05D004764 ORTHO05D005580 4.9e-20 102.8 57 89.5
Cre17.g711450 Chlamydomonas reinhardtii HOM05D004764 ORTHO05D005580 3.1e-14 83.6 394 25.9
Ah.16g102910 Amaranthus hybridus HOM05D004764 ORTHO05D005580 6.8e-14 82.4 62 74.2
Sc11g0007520 Simmondsia chinensis HOM05D004764 ORTHO05D005580 3.2e-11 73.6 92 50.0
HanXRQChr16g0528961 Helianthus annuus HOM05D004764 ORTHO05D005580 3.6e-07 60.1 90 41.1
BraA05t20843Z Brassica rapa HOM05D000051 ORTHO05D000015 1.8e-06 57.8 32 78.1
PRCOL_00004763 Prasinoderma coloniale HOM05D001748 ORTHO05D001759 8.9e-06 55.5 129 34.1

Acer truncatum (2 genes)
Actinidia chinensis (4 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (3 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (5 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (2 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (2 genes)
Lonicera japonica (4 genes)
Lotus japonicus (2 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (4 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (3 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (4 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings