Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009438 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D008018 1.9e-256 888.6 445 100.0
CSS0027895 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D008018 1.1e-254 882.9 445 99.6
vmacro07336 Vaccinium macrocarpon HOM05D001312 ORTHO05D008018 4.2e-219 764.6 444 84.9
Actinidia39872 Actinidia chinensis HOM05D001312 ORTHO05D008018 2.9e-212 741.9 442 84.2
Rhsim03G0083100 Rhododendron simsii HOM05D001312 ORTHO05D008018 7.6e-205 717.2 418 85.4
TAR633G1314 Trochodendron aralioides HOM05D001312 ORTHO05D001832 7.2e-195 684.1 441 76.0
Thecc.05G079000 Theobroma cacao HOM05D001312 ORTHO05D008018 2.2e-188 662.5 441 73.0
Potri.016G095900 Populus trichocarpa HOM05D001312 ORTHO05D008018 2.7e-186 655.6 443 72.7
PGSC0003DMG400028176 Solanum tuberosum HOM05D001312 ORTHO05D008018 4.7e-186 654.8 442 72.4
Lj3A1005G38 Lonicera japonica HOM05D001312 ORTHO05D008018 8.8e-185 650.6 488 67.6
COL.COLO4_22294 Corchorus olitorius HOM05D001312 ORTHO05D008018 9.7e-184 647.1 443 72.5
Nitab4.5_0004490g0050 Nicotiana tabacum HOM05D001312 ORTHO05D008018 1.4e-182 643.3 471 67.5
Gorai.009G409200 Gossypium raimondii HOM05D001312 ORTHO05D008018 7.0e-182 641.0 435 71.5
TWI53G1380 Tripterygium wilfordii HOM05D001312 ORTHO05D008018 1.2e-181 640.2 438 70.8
RcHm_v2.0_Chr3g0471781 Rosa chinensis HOM05D001312 ORTHO05D008018 1.5e-181 639.8 442 70.6
Gohir.D04G105500 Gossypium hirsutum HOM05D001312 ORTHO05D008018 2.6e-181 639.0 435 71.5
Migut.J00495 Erythranthe guttata HOM05D001312 ORTHO05D008018 1.0e-180 637.1 439 70.6
MSTRG.5801 Avicennia marina HOM05D001312 ORTHO05D008018 5.0e-180 634.8 439 69.2
Cc06_g05050 Coffea canephora HOM05D001312 ORTHO05D008018 8.5e-180 634.0 441 69.8
CiPaw.10G004200 Carya illinoinensis HOM05D001312 ORTHO05D008018 1.1e-179 633.6 438 70.5
FvH4_6g17520 Fragaria vesca HOM05D001312 ORTHO05D008018 5.5e-179 631.3 442 70.1
MD14G1093900 Malus domestica HOM05D001312 ORTHO05D008018 1.6e-178 629.8 443 69.1
CANSAT80G2114 Cannabis sativa HOM05D001312 ORTHO05D008018 8.8e-177 624.0 443 70.2
FAN05G3053 Fragaria x ananassa HOM05D001312 ORTHO05D008018 4.4e-176 621.7 451 68.1
FAN05G0775 Fragaria x ananassa HOM05D001312 ORTHO05D008018 1.3e-175 620.2 451 67.8
Aqoxy1G00967 Aquilegia oxysepala HOM05D001312 ORTHO05D008018 3.7e-175 618.6 442 69.5
Solyc10g083710.2 Solanum lycopersicum HOM05D001312 ORTHO05D008018 1.8e-174 616.3 442 69.0
arahy.Tifrunner.gnm1.ann1.42C0B0 Arachis hypogaea HOM05D001312 ORTHO05D008018 5.3e-174 614.8 441 67.3
arahy.Tifrunner.gnm1.ann1.C1UQYX Arachis hypogaea HOM05D001312 ORTHO05D008018 5.3e-174 614.8 441 67.3
Cpa.g.sc5.99 Carica papaya HOM05D001312 ORTHO05D008018 5.3e-174 614.8 435 69.7
FAN14G3191 Fragaria x ananassa HOM05D001312 ORTHO05D008018 5.3e-174 614.8 468 66.0
Phvul.007G224100 Phaseolus vulgaris HOM05D001312 ORTHO05D008018 7.0e-174 614.4 436 69.0
TPR.G5684 Trifolium pratense HOM05D001312 ORTHO05D008018 7.0e-174 614.4 436 67.7
Dinv35859 Davidia involucrata HOM05D001312 ORTHO05D008018 2.0e-173 612.8 362 82.6
Lsat_1_v5_gn_1_50640 Lactuca sativa HOM05D001312 ORTHO05D008018 4.5e-173 611.7 434 68.0
QL07p040881 Quercus lobata HOM05D001312 ORTHO05D008018 5.9e-173 611.3 509 62.1
GSVIVG01033751001 Vitis vinifera HOM05D001312 ORTHO05D008018 1.0e-172 610.5 382 77.7
Lj5g0006635 Lotus japonicus HOM05D001312 ORTHO05D008018 2.9e-172 609.0 438 68.0
ECA248G1880 Erigeron canadensis HOM05D001312 ORTHO05D008018 1.1e-171 607.1 436 67.0
SalBow3G2703 Salvia bowleyana HOM05D001312 ORTHO05D008018 3.2e-171 605.5 466 65.2
VMungo0720G0477 Vigna mungo HOM05D001312 ORTHO05D008018 3.2e-171 605.5 434 68.4
Glyma.10G065300 Glycine max HOM05D001312 ORTHO05D008018 5.5e-171 604.7 434 68.2
Medtr1g061560 Medicago truncatula HOM05D001312 ORTHO05D008018 2.1e-170 602.8 434 67.3
BcaC06g32083 Brassica carinata HOM05D001312 ORTHO05D008018 1.8e-169 599.7 436 66.7
FAN09G2766 Fragaria x ananassa HOM05D001312 ORTHO05D008018 8.8e-169 597.4 468 64.3
Sabra16G0101200 Salix brachista HOM05D001312 ORTHO05D008018 3.3e-168 595.5 550 57.5
CsaV3_6G040350 Cucumis sativus L. HOM05D001312 ORTHO05D008018 4.4e-168 595.1 443 65.9
AT5G03770 Arabidopsis thaliana HOM05D001312 ORTHO05D008018 1.7e-167 593.2 434 67.1
Thhalv10013569m.g Eutrema salsugineum HOM05D001312 ORTHO05D008018 1.7e-167 593.2 436 66.5
Eucgr.A01566 Eucalyptus grandis HOM05D001312 ORTHO05D008018 2.2e-167 592.8 435 66.4
Sed0012062 Sechium edule HOM05D001312 ORTHO05D008018 2.8e-167 592.4 443 66.4
Sp6g38960 Schrenkiella parvula HOM05D001312 ORTHO05D008018 8.3e-167 590.9 437 65.7
FAN02G1263 Fragaria x ananassa HOM05D001312 ORTHO05D008018 1.1e-166 590.5 442 67.0
ClCG04G009690 Citrullus lanatus HOM05D001312 ORTHO05D008018 3.1e-166 589.0 440 66.6
A10p32330 Brassica napus HOM05D001312 ORTHO05D008018 7.0e-166 587.8 437 66.1
BraA10t45274Z Brassica rapa HOM05D001312 ORTHO05D008018 7.0e-166 587.8 437 66.1
Oeu039841.2 Olea europaea HOM05D001312 ORTHO05D008018 3.5e-165 585.5 568 55.3
C09p73160 Brassica napus HOM05D001312 ORTHO05D008018 5.9e-165 584.7 437 66.1
Carub.0006s0268 Capsella rubella HOM05D001312 ORTHO05D008018 7.7e-165 584.3 439 65.6
PSO063G2793 Papaver somniferum HOM05D001312 ORTHO05D008018 2.9e-164 582.4 468 60.5
BolC9t60051H Brassica oleracea HOM05D001312 ORTHO05D008018 1.1e-163 580.5 437 65.9
HanXRQChr01g0028401 Helianthus annuus HOM05D001312 ORTHO05D008018 1.1e-163 580.5 433 65.4
AL6G13310 Arabidopsis lyrata HOM05D001312 ORTHO05D008018 4.2e-163 578.6 456 63.6
Atru.BG.216.p Acer truncatum HOM05D001312 ORTHO05D008018 1.2e-162 577.0 433 68.4
Nn6g35083 Nelumbo nucifera HOM05D001312 ORTHO05D008018 1.2e-162 577.0 440 66.8
PSO339G3022 Papaver somniferum HOM05D001312 ORTHO05D008018 8.0e-162 574.3 430 64.2
Sc02g0001220 Simmondsia chinensis HOM05D001312 ORTHO05D008018 1.0e-161 573.9 387 72.1
SGA_v2.0_scaffold40G15429 Striga asiatica HOM05D001312 ORTHO05D008018 5.2e-161 571.6 447 63.8
Nitab4.5_0000132g0320 Nicotiana tabacum HOM05D001312 ORTHO05D008018 3.4e-160 568.9 470 62.1
EL10Ac7g16768 Beta vulgaris HOM05D001312 ORTHO05D008018 4.4e-160 568.5 439 63.6
Haze_19515 Corylus avellana HOM05D001312 ORTHO05D008018 7.5e-160 567.8 438 65.3
Gohir.A04G066728 Gossypium hirsutum HOM05D001312 ORTHO05D008018 4.8e-159 565.1 382 72.8
Manes.08G018900 Manihot esculenta HOM05D001312 ORTHO05D008018 8.3e-159 564.3 380 73.4
THA.LOC104816378 Tarenaya hassleriana HOM05D001312 ORTHO05D008018 8.3e-159 564.3 439 63.3
MELO3C024510.2 Cucumis melo HOM05D001312 ORTHO05D008018 9.5e-155 550.8 389 68.9
Ca_11617_v3 Cicer arietinum L. HOM05D001312 ORTHO05D008018 3.5e-149 532.3 412 65.0
CiPaw.09G007400 Carya illinoinensis HOM05D001312 ORTHO05D008018 8.0e-146 521.2 370 70.8
ATR0820G168 Amborella trichopoda HOM05D001312 ORTHO05D008018 2.2e-143 513.1 441 58.3
Peaxi162Scf00110g01214 Petunia axillaris HOM05D001312 ORTHO05D008018 1.9e-142 510.0 458 59.4
SEGI_32755 Sequoiadendron giganteum HOM05D001312 ORTHO05D008018 7.8e-141 504.6 429 58.5
Hma1.2p1_0651F.1_g195720 Hydrangea macrophylla HOM05D001312 ORTHO05D008018 1.5e-136 490.3 324 76.2
Zm00001eb147410 Zea mays HOM05D001312 ORTHO05D008018 1.5e-136 490.3 429 56.2
Atru.chr8.1664 Acer truncatum HOM05D001312 ORTHO05D008018 7.0e-134 481.5 318 73.9
Aa31LG1G21490 Aethionema arabicum HOM05D001312 ORTHO05D008018 1.7e-132 476.9 408 60.8
unitig_744.g24689 Utricularia gibba HOM05D001312 ORTHO05D008018 3.6e-130 469.2 425 56.0
Prupe.7G120300 Prunus persica HOM05D001312 ORTHO05D008018 7.5e-128 461.5 322 70.8
Ah.15g091190 Amaranthus hybridus HOM05D001312 ORTHO05D008018 1.7e-127 460.3 384 61.5
SMO364G0357 Selaginella moellendorffii HOM05D001312 ORTHO05D008018 3.0e-116 422.9 427 50.6
AagrBONN_evm.TU.Sc2ySwM_344.3661 Anthoceros agrestis HOM05D001312 ORTHO05D008018 1.1e-115 421.0 430 50.2
MBI01_g23067_MAGBIO Magnolia biondii HOM05D001312 ORTHO05D008018 9.6e-115 417.9 293 69.3
Pp3c21_8090 Physcomitrium patens HOM05D001312 ORTHO05D008018 4.8e-114 415.6 430 48.1
CARHR209530 Cardamine hirsuta HOM05D001312 ORTHO05D008018 9.9e-112 407.9 287 68.6
DCAR_015029 Daucus carota HOM05D001312 ORTHO05D008018 1.4e-110 404.1 313 64.5
Psat6g076240 Pisum sativum HOM05D001312 ORTHO05D008018 1.6e-109 400.6 280 72.9
Mapoly0002s0209 Marchantia polymorpha HOM05D001312 ORTHO05D008018 1.3e-106 391.0 431 47.1
Ciclev10032390m.g Citrus clementina HOM05D001312 ORTHO05D008018 2.9e-103 379.8 251 74.5
CBR_g874 Chara braunii HOM05D001312 ORTHO05D008018 7.9e-93 345.1 371 49.6
Hund20444 Selenicereus undatus HOM05D001312 ORTHO05D008018 5.0e-87 325.9 288 58.0
Sopen10g033180 Solanum pennellii HOM05D001312 ORTHO05D008018 2.6e-67 260.4 183 70.5
Os01g0857300 Oryza sativa ssp. japonica HOM05D001312 ORTHO05D008018 1.9e-62 244.2 190 63.7
AUR62037894 Chenopodium quinoa HOM05D001312 ORTHO05D008018 1.8e-60 237.7 286 47.6
Lalb_Chr21g0315421 Lupinus albus HOM05D001312 ORTHO05D008018 3.5e-56 223.4 155 71.6
AUR62033601 Chenopodium quinoa HOM05D001312 ORTHO05D008018 6.8e-52 209.1 307 41.0
Lalb_Chr21g0315431 Lupinus albus HOM05D001312 ORTHO05D008018 1.2e-51 208.4 154 68.2
HPP92_006796 Vanilla planifolia HOM05D001312 ORTHO05D008018 1.5e-51 208.0 332 38.6
Ciclev10013092m.g Citrus clementina HOM05D001312 ORTHO05D008018 5.4e-49 199.5 132 74.2
MBI01_g48091_MAGBIO Magnolia biondii HOM05D001312 ORTHO05D008018 8.5e-47 192.2 149 65.1
HPP92_006792 Vanilla planifolia HOM05D001312 ORTHO05D008018 4.0e-44 183.3 211 46.0
arahy.Tifrunner.gnm1.ann1.IWGZ26 Arachis hypogaea HOM05D001312 ORTHO05D008018 8.3e-42 175.6 155 60.6
Glyma.13G150200 Glycine max HOM05D001312 ORTHO05D008018 1.7e-39 167.9 143 61.5
CARHR208850 Cardamine hirsuta HOM05D001312 ORTHO05D008018 6.1e-37 159.5 122 63.9
DCAR_015030 Daucus carota HOM05D001312 ORTHO05D008018 7.5e-35 152.5 98 71.4
Lalb_Chr21g0315441 Lupinus albus HOM05D001312 ORTHO05D008018 4.9e-34 149.8 93 71.0
Zm00001eb059120 Zea mays HOM05D000212 ORTHO05D008018 3.9e-31 140.2 96 63.5
CARHR208860 Cardamine hirsuta HOM05D001312 ORTHO05D008018 2.8e-29 134.0 92 71.7
Cre13.g583100 Chlamydomonas reinhardtii HOM05D001312 ORTHO05D008018 1.2e-27 128.6 386 28.8
arahy.Tifrunner.gnm1.ann1.UHL2QJ Arachis hypogaea HOM05D000705 ORTHO05D008018 6.0e-16 89.7 154 34.4
Zm00001eb009840 Zea mays HOM05D001312 ORTHO05D008018 1.6e-13 81.6 63 57.1
VMungo0251G1834 Vigna mungo HOM05D001312 ORTHO05D008018 3.6e-13 80.5 50 68.0
Zm00001eb059130 Zea mays HOM05D000212 ORTHO05D002824 3.6e-13 80.5 55 65.5
A03p01370 Brassica napus HOM05D001312 ORTHO05D008018 9.9e-11 72.4 70 48.6
CARHR208870 Cardamine hirsuta HOM05D001312 ORTHO05D008018 9.9e-11 72.4 68 51.5
C03p01710 Brassica napus HOM05D001312 ORTHO05D008018 9.2e-09 65.9 69 46.4
BolC3t12726H Brassica oleracea HOM05D001312 ORTHO05D008018 9.2e-09 65.9 69 46.4
BraA03t09516Z Brassica rapa HOM05D001312 ORTHO05D008018 1.5e-06 58.5 58 48.3
Rhsim03G0100700 Rhododendron simsii HOM05D005422 ORTHO05D006578 5.6e-06 56.6 39 66.7

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (4 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (2 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (1 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (3 genes)
Magnolia biondii (2 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (0 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (4 genes)

Program Settings