Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 1.8e-185 652.5 343 100.0
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 5.9e-181 637.5 343 97.7
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 1.4e-137 493.4 342 76.6
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 1.6e-122 443.4 343 69.7
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 4.8e-122 441.8 342 70.2
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 1.4e-121 440.3 341 70.1
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 2.0e-120 436.4 347 68.9
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 3.4e-120 435.6 347 68.9
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 1.6e-117 426.8 348 67.2
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 5.1e-116 421.8 348 67.2
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 8.7e-116 421.0 342 69.9
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 1.1e-115 420.6 343 65.9
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 1.5e-115 420.2 348 66.4
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 2.5e-115 419.5 344 67.4
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 2.5e-115 419.5 346 65.9
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 4.8e-114 415.2 345 65.2
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 2.4e-113 412.9 343 65.0
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 2.4e-113 412.9 344 65.7
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 4.0e-113 412.1 344 66.6
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 4.0e-113 412.1 343 64.7
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 5.8e-112 408.3 344 65.1
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 1.0e-111 407.5 343 64.4
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 3.8e-111 405.6 333 67.0
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 6.5e-111 404.8 345 65.2
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 2.5e-110 402.9 346 63.9
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 3.2e-110 402.5 346 63.6
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 4.2e-110 402.1 351 62.7
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 7.1e-110 401.4 343 64.4
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 1.2e-109 400.6 343 64.4
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 2.1e-109 399.8 345 65.2
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 3.5e-109 399.1 345 63.5
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 6.0e-109 398.3 345 64.3
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 1.0e-108 397.5 295 71.2
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 1.0e-108 397.5 344 64.2
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 5.1e-108 395.2 344 64.2
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 8.7e-108 394.4 344 61.6
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 1.5e-107 393.7 346 62.1
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 1.5e-107 393.7 346 62.1
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 1.5e-107 393.7 344 61.6
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 1.9e-107 393.3 349 62.5
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 4.3e-107 392.1 344 60.8
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 1.3e-106 390.6 344 63.1
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 1.6e-106 390.2 345 59.4
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 2.8e-106 389.4 345 61.4
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 2.8e-106 389.4 344 63.1
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 4.8e-106 388.7 345 62.0
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 6.3e-106 388.3 342 62.6
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 8.2e-106 387.9 346 61.8
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 9.0e-105 384.4 352 63.4
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 1.2e-104 384.0 346 63.3
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 1.5e-104 383.6 345 62.9
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 2.0e-104 383.3 348 60.3
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 3.4e-104 382.5 347 61.1
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 3.4e-104 382.5 351 61.8
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 4.5e-104 382.1 350 62.3
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 5.9e-104 381.7 345 60.0
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 1.0e-103 380.9 343 60.9
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 5.0e-103 378.6 348 62.6
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 2.5e-102 376.3 283 67.8
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 2.5e-102 376.3 346 62.4
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 5.5e-102 375.2 346 58.4
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 8.8e-100 367.9 346 57.8
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 4.3e-99 365.5 354 56.8
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 1.7e-98 363.6 345 59.7
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 1.1e-97 360.9 274 71.5
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 1.5e-96 357.1 351 57.5
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 2.9e-95 352.8 336 61.3
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 3.8e-95 352.4 280 65.4
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 3.2e-94 349.4 312 62.5
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 1.0e-92 344.4 281 63.3
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 4.8e-90 335.5 276 62.7
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 8.2e-90 334.7 347 57.9
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 1.1e-89 334.3 347 57.3
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 1.8e-89 333.6 340 58.5
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 1.8e-89 333.6 347 57.1
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 9.1e-89 331.3 347 56.2
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 2.0e-88 330.1 351 57.8
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 4.5e-88 328.9 343 53.9
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 1.3e-87 327.4 347 56.8
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 2.9e-87 326.2 347 56.5
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 1.9e-86 323.6 340 57.4
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 1.9e-86 323.6 340 57.4
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 2.5e-86 323.2 351 56.1
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 1.8e-84 317.0 350 55.4
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 4.4e-83 312.4 348 56.0
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 2.2e-82 310.1 318 58.8
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 2.6e-80 303.1 348 54.6
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 4.4e-75 285.8 316 50.0
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 2.2e-74 283.5 206 71.8
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 1.0e-60 238.0 329 42.9
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 1.8e-60 237.3 184 63.0
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 1.2e-56 224.6 308 46.4
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 2.8e-53 213.4 133 75.9
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 5.2e-52 209.1 201 59.2
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 2.4e-49 200.3 121 81.8
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 7.8e-48 195.3 271 38.7
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 4.1e-33 146.4 273 33.7
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 2.1e-32 144.1 248 44.0
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 6.0e-32 142.5 275 34.5
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 3.6e-29 133.3 115 64.3
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 5.2e-28 129.4 215 44.7
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 3.8e-26 123.2 135 50.4
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 1.7e-23 114.4 115 53.9
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 1.7e-18 97.8 263 27.0
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 6.9e-12 75.9 107 39.3
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 1.4e-09 68.2 237 25.3

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (5 genes)
Brassica napus (2 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (1 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings