Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005985 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 6.9e-35 150.2 83 100.0
CSS0005499 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 1.5e-34 149.1 83 98.8
Nitab4.5_0003551g0100 Nicotiana tabacum HOM05D006325 ORTHO05D007878 2.7e-18 95.1 81 70.4
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.7e-17 92.4 78 70.5
PGSC0003DMG402022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.7e-17 92.4 81 69.1
PGSC0003DMG403011204 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.7e-17 92.4 81 69.1
Hma1.2p1_0594F.1_g185940 Hydrangea macrophylla HOM05D006325 ORTHO05D007878 2.9e-17 91.7 83 65.1
Nitab4.5_0002611g0130 Nicotiana tabacum HOM05D006325 ORTHO05D007878 3.8e-17 91.3 79 67.1
CAN.G160.11 Capsicum annuum HOM05D006325 ORTHO05D007878 1.5e-16 89.4 82 63.4
PGSC0003DMG400011149 Solanum tuberosum HOM05D006325 ORTHO05D007878 4.2e-16 87.8 80 66.2
Phvul.002G178300 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 9.4e-16 86.7 80 63.8
Phvul.002G179400 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 9.4e-16 86.7 80 63.8
Ca_18164_v3 Cicer arietinum L. HOM05D006325 ORTHO05D007878 3.6e-15 84.7 87 58.6
CAN.G160.12 Capsicum annuum HOM05D006325 ORTHO05D007878 1.8e-14 82.4 105 51.4
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 1.8e-14 82.4 83 63.9
Lalb_Chr13g0293971 Lupinus albus HOM05D006325 ORTHO05D007878 4.0e-14 81.3 90 61.1
Sopen11g011030 Solanum pennellii HOM05D006325 ORTHO05D007878 4.0e-14 81.3 75 61.3
PGSC0003DMG401022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 4.0e-14 81.3 82 61.0
Ciclev10026747m.g Citrus clementina HOM05D006325 ORTHO05D007878 5.2e-14 80.9 77 62.3
Solyc11g020860.1 Solanum lycopersicum HOM05D006325 ORTHO05D007878 5.2e-14 80.9 76 64.5
RcHm_v2.0_Chr5g0014631 Rosa chinensis HOM05D006325 ORTHO05D007878 8.8e-14 80.1 98 54.1
CAN.G2122.1 Capsicum annuum HOM05D006325 ORTHO05D007878 1.2e-13 79.7 102 51.0
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 1.5e-13 79.3 93 57.0
FvH4_3g05130 Fragaria vesca HOM05D006325 ORTHO05D007878 2.0e-13 79.0 88 58.0
CAN.G160.10 Capsicum annuum HOM05D006325 ORTHO05D007878 2.6e-13 78.6 102 51.0
Ciclev10026858m.g Citrus clementina HOM05D006325 ORTHO05D007878 2.6e-13 78.6 78 60.3
MD10G1258900 Malus domestica HOM05D006325 ORTHO05D007878 2.6e-13 78.6 96 56.2
Nn3g20453 Nelumbo nucifera HOM05D006325 ORTHO05D007878 2.6e-13 78.6 86 61.6
CiPaw.10G089300 Carya illinoinensis HOM05D006325 ORTHO05D007878 3.4e-13 78.2 89 60.7
CiPaw.09G120800 Carya illinoinensis HOM05D006325 ORTHO05D007878 4.4e-13 77.8 84 58.3
CsaV3_6G051960 Cucumis sativus L. HOM05D006325 ORTHO05D007878 5.7e-13 77.4 86 55.8
MELO3C007112.2 Cucumis melo HOM05D006325 ORTHO05D007878 1.3e-12 76.3 85 57.6
Potri.011G081001 Populus trichocarpa HOM05D006325 ORTHO05D007878 1.3e-12 76.3 80 55.0
Lalb_Chr07g0187521 Lupinus albus HOM05D006325 ORTHO05D007878 1.7e-12 75.9 99 50.5
Medtr4g083110 Medicago truncatula HOM05D006325 ORTHO05D007878 1.7e-12 75.9 83 57.8
Psat7g080360 Pisum sativum HOM05D006325 ORTHO05D007878 2.8e-12 75.1 95 52.6
FAN21G1261 Fragaria x ananassa HOM05D006325 ORTHO05D007878 3.7e-12 74.7 88 54.5
FAN25G3009 Fragaria x ananassa HOM05D006325 ORTHO05D007878 3.7e-12 74.7 88 54.5
Psat7g080440 Pisum sativum HOM05D006325 ORTHO05D007878 3.7e-12 74.7 91 53.8
FAN11G2857 Fragaria x ananassa HOM05D006325 ORTHO05D007878 4.8e-12 74.3 88 54.5
PGSC0003DMG400009263 Solanum tuberosum HOM05D006325 ORTHO05D007878 4.8e-12 74.3 77 57.1
Glyma.08G099000 Glycine max HOM05D006325 ORTHO05D007878 6.3e-12 73.9 88 53.4
Potri.004G133180 Populus trichocarpa HOM05D006325 ORTHO05D007878 6.3e-12 73.9 80 53.8
TWI09G0296 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 6.3e-12 73.9 95 55.8
CAN.G2122.2 Capsicum annuum HOM05D006325 ORTHO05D007878 1.1e-11 73.2 78 57.7
Haze_05647 Corylus avellana HOM05D006325 ORTHO05D007878 1.4e-11 72.8 80 60.0
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 1.4e-11 72.8 80 56.2
Medtr5g077640 Medicago truncatula HOM05D006325 ORTHO05D007878 1.4e-11 72.8 87 55.2
Sed0008419 Sechium edule HOM05D006325 ORTHO05D007878 1.4e-11 72.8 80 56.2
Thecc.06G145500 Theobroma cacao HOM05D006325 ORTHO05D007878 1.4e-11 72.8 81 58.0
Sabra11G0064500 Salix brachista HOM05D006325 ORTHO05D007878 1.8e-11 72.4 82 52.4
TWI53G1846 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 1.8e-11 72.4 95 51.6
FAN16G1041 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.4e-11 72.0 88 53.4
FAN16G2667 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.4e-11 72.0 88 53.4
QL05p055432 Quercus lobata HOM05D006325 ORTHO05D007878 2.4e-11 72.0 85 55.3
ClCG01G024840 Citrullus lanatus HOM05D006325 ORTHO05D007878 4.1e-11 71.2 50 74.0
TPR.G34042 Trifolium pratense HOM05D006325 ORTHO05D007878 4.1e-11 71.2 85 50.6
Cc00_g01980 Coffea canephora HOM05D006325 ORTHO05D007878 5.4e-11 70.9 81 53.1
Psat7g080320 Pisum sativum HOM05D006325 ORTHO05D007878 5.4e-11 70.9 90 46.7
Sopen07g002000 Solanum pennellii HOM05D006325 ORTHO05D007878 7.0e-11 70.5 81 56.8
QL04p045948 Quercus lobata HOM05D006325 ORTHO05D007878 1.6e-10 69.3 65 61.5
Glyma.05G143000 Glycine max HOM05D006325 ORTHO05D007878 2.7e-10 68.6 87 50.6
QL04p045922 Quercus lobata HOM05D006325 ORTHO05D007878 2.7e-10 68.6 59 64.4
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 2.7e-10 68.6 54 68.5
Cpa.g.sc17.42 Carica papaya HOM05D006325 ORTHO05D007878 3.5e-10 68.2 88 50.0
TPR.G13312 Trifolium pratense HOM05D006325 ORTHO05D007878 3.5e-10 68.2 91 50.5
CANSAT35G0285 Cannabis sativa HOM05D006325 ORTHO05D007878 4.5e-10 67.8 51 70.6
DCAR_007876 Daucus carota HOM05D006325 ORTHO05D007878 4.5e-10 67.8 81 53.1
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 5.9e-10 67.4 50 68.0
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 5.9e-10 67.4 50 68.0
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 5.9e-10 67.4 50 68.0
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 5.9e-10 67.4 50 68.0
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 5.9e-10 67.4 50 68.0
TPR.G21965 Trifolium pratense HOM05D006325 ORTHO05D007878 7.7e-10 67.0 95 48.4
Ciclev10017179m.g Citrus clementina HOM05D006325 ORTHO05D007878 1.0e-09 66.6 88 48.9
Duzib192G0952 Durio zibethinus HOM05D006325 ORTHO05D007878 1.0e-09 66.6 84 50.0
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 1.0e-09 66.6 52 67.3
CAN.G160.9 Capsicum annuum HOM05D006325 ORTHO05D007878 1.7e-09 65.9 79 53.2
Gorai.009G153100 Gossypium raimondii HOM05D006325 ORTHO05D007878 1.7e-09 65.9 79 54.4
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 2.2e-09 65.5 58 62.1
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 2.9e-09 65.1 63 58.7
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 2.9e-09 65.1 68 57.4
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 3.8e-09 64.7 74 52.7
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 3.8e-09 64.7 74 52.7
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 3.8e-09 64.7 74 52.7
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 3.8e-09 64.7 68 57.4
Eucgr.D00273 Eucalyptus grandis HOM05D006325 ORTHO05D007878 5.0e-09 64.3 48 72.9
Gohir.A05G146600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 8.5e-09 63.5 78 55.1
Nitab4.5_0008310g0030 Nicotiana tabacum HOM05D006325 ORTHO05D007878 8.5e-09 63.5 61 54.1
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 1.1e-08 63.2 67 56.7
MELO3C002763.2 Cucumis melo HOM05D006325 ORTHO05D007878 1.1e-08 63.2 82 48.8
Gohir.D05G149100 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.1e-08 63.2 78 55.1
Nn4g26622 Nelumbo nucifera HOM05D006325 ORTHO05D007878 1.1e-08 63.2 50 66.0
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 1.5e-08 62.8 49 65.3
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 1.5e-08 62.8 49 63.3
Lj4g0007216 Lotus japonicus HOM05D006325 ORTHO05D007878 2.5e-08 62.0 87 48.3
Medtr5g077680 Medicago truncatula HOM05D006325 ORTHO05D007878 3.2e-08 61.6 48 64.6
Medtr8g079458 Medicago truncatula HOM05D006325 ORTHO05D007878 3.2e-08 61.6 48 64.6
Peaxi162Scf00062g00009 Petunia axillaris HOM05D006325 ORTHO05D007878 3.2e-08 61.6 61 57.4
Lsat_1_v5_gn_0_34220 Lactuca sativa HOM05D006325 ORTHO05D007878 4.2e-08 61.2 77 51.9
ClCG03G006550 Citrullus lanatus HOM05D006325 ORTHO05D007878 5.5e-08 60.8 87 44.8
Lsat_1_v5_gn_7_27621 Lactuca sativa HOM05D006325 ORTHO05D007878 7.2e-08 60.5 86 47.7
Medtr4g012020 Medicago truncatula HOM05D006325 ORTHO05D007878 7.2e-08 60.5 48 64.6
COL.COLO4_31021 Corchorus olitorius HOM05D006325 ORTHO05D007878 1.2e-07 59.7 63 57.1
CsaV3_1G036810 Cucumis sativus L. HOM05D006325 ORTHO05D007878 1.2e-07 59.7 80 48.8
Manes.15G124400 Manihot esculenta HOM05D006325 ORTHO05D007878 1.6e-07 59.3 60 61.7
MBI02_g07020_MAGBIO Magnolia biondii HOM05D006325 ORTHO05D007878 2.1e-07 58.9 50 68.0
Medtr1437s0010 Medicago truncatula HOM05D006325 ORTHO05D007878 2.1e-07 58.9 48 60.4
Oeu030957.1 Olea europaea HOM05D006325 ORTHO05D007878 2.7e-07 58.5 61 54.1
PSO541G2396 Papaver somniferum HOM05D006325 ORTHO05D007878 2.7e-07 58.5 88 46.6
Gohir.A06G139600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 3.6e-07 58.2 57 59.6
Duzib160G0583 Durio zibethinus HOM05D006325 ORTHO05D007878 4.7e-07 57.8 56 57.1
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 6.1e-07 57.4 51 62.7
Lj4g0010729 Lotus japonicus HOM05D006325 ORTHO05D007878 6.1e-07 57.4 85 45.9
Oeu030955.1 Olea europaea HOM05D006325 ORTHO05D007878 8.0e-07 57.0 38 71.1
Gohir.D06G144350 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.8e-06 55.8 57 57.9
Gorai.010G168000 Gossypium raimondii HOM05D006325 ORTHO05D007878 1.8e-06 55.8 57 57.9
Aqoxy4G00063 Aquilegia oxysepala HOM05D006325 ORTHO05D007878 2.3e-06 55.5 75 49.3
MBI18_g11235_MAGBIO Magnolia biondii HOM05D006325 ORTHO05D007878 5.2e-06 54.3 77 50.6

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (4 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (6 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (3 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (2 genes)
Daucus carota (1 genes)
Davidia involucrata (0 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (0 genes)
Lotus japonicus (2 genes)
Lupinus albus (2 genes)
Magnolia biondii (2 genes)
Malus domestica (1 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (6 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (4 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (3 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (0 genes)
Quercus lobata (3 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (3 genes)
Solanum tuberosum (5 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings