Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 8.2e-118 427.2 230 100.0
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 9.0e-117 423.7 228 99.6
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 1.7e-86 323.2 229 73.4
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 2.8e-86 322.4 192 82.3
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 2.0e-84 316.2 183 81.4
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 4.5e-84 315.1 239 69.9
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 3.8e-83 312.0 176 83.5
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 6.5e-83 311.2 183 78.7
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 3.2e-82 308.9 183 78.7
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 5.5e-82 308.1 227 67.8
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 9.4e-82 307.4 186 79.0
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 1.2e-81 307.0 183 80.3
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.6e-81 306.6 186 78.0
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 2.7e-81 305.8 175 81.7
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 4.7e-81 305.1 176 83.5
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 1.0e-80 303.9 175 83.4
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 1.4e-80 303.5 176 82.4
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 5.2e-80 301.6 186 76.9
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 8.8e-80 300.8 172 83.7
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 2.0e-79 299.7 231 65.8
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 2.6e-79 299.3 177 80.8
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 3.3e-79 298.9 176 80.7
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 4.4e-79 298.5 176 80.7
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 5.7e-79 298.1 216 68.1
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 1.3e-78 297.0 176 80.1
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.3e-78 297.0 185 76.8
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 2.8e-78 295.8 175 78.3
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 3.7e-78 295.4 185 76.2
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 6.3e-78 294.7 173 80.3
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 8.2e-78 294.3 185 76.2
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 1.1e-77 293.9 175 78.9
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 1.4e-77 293.5 183 78.1
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 2.4e-77 292.7 175 80.0
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 4.1e-77 292.0 182 76.4
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 9.1e-77 290.8 173 79.2
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 1.6e-76 290.0 173 79.2
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 2.7e-76 289.3 183 74.9
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 2.7e-76 289.3 179 76.5
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 7.7e-76 287.7 173 79.8
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 1.0e-75 287.3 183 74.9
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 1.7e-75 286.6 179 77.1
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 2.2e-75 286.2 185 74.1
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 2.9e-75 285.8 183 74.9
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 3.8e-75 285.4 178 74.7
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 6.5e-75 284.6 175 76.0
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 8.5e-75 284.3 178 76.4
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 1.9e-74 283.1 176 77.8
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 2.5e-74 282.7 184 73.9
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 2.5e-74 282.7 173 77.5
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 1.2e-73 280.4 175 76.0
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 1.2e-73 280.4 177 75.1
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 1.6e-73 280.0 183 71.6
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 1.6e-73 280.0 229 66.4
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 3.6e-73 278.9 176 76.1
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 5.7e-71 271.6 196 67.9
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 7.5e-71 271.2 175 74.3
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 1.3e-70 270.4 163 81.6
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 2.8e-70 269.2 201 67.7
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 8.3e-70 267.7 176 73.3
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 1.4e-69 266.9 176 72.2
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 1.8e-69 266.5 179 72.1
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 9.1e-69 264.2 184 70.1
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 9.1e-69 264.2 185 67.6
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 9.1e-69 264.2 184 70.1
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 9.1e-69 264.2 185 67.6
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 9.1e-69 264.2 181 70.2
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 1.6e-68 263.5 227 70.0
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 1.6e-68 263.5 183 68.9
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 2.0e-68 263.1 184 70.7
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 2.0e-68 263.1 184 70.7
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 2.0e-68 263.1 184 70.7
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 7.7e-68 261.2 173 72.3
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 1.3e-67 260.4 173 71.7
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 1.1e-66 257.3 173 71.7
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 1.5e-66 256.9 172 71.5
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 1.5e-66 256.9 173 71.7
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 2.5e-66 256.1 177 70.1
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 3.3e-66 255.8 143 85.3
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 9.5e-66 254.2 173 69.4
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 1.2e-65 253.8 182 70.9
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 2.1e-65 253.1 173 69.4
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 6.1e-65 251.5 182 70.3
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 6.1e-65 251.5 172 66.3
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 8.0e-65 251.1 173 68.8
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 2.3e-64 249.6 176 67.6
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 2.3e-64 249.6 152 76.3
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 4.0e-64 248.8 219 61.2
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 5.2e-64 248.4 152 76.3
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 8.9e-64 247.7 169 70.4
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 9.8e-63 244.2 151 78.8
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 4.5e-60 235.3 148 77.0
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 1.9e-58 229.9 176 65.9
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 2.5e-58 229.6 133 81.2
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 8.0e-57 224.6 137 75.2
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 1.3e-54 217.2 181 64.1
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 2.0e-52 209.9 160 68.8
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 1.3e-51 207.2 151 70.9
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 1.1e-50 204.1 147 68.7
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 2.8e-49 199.5 196 56.6
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 3.6e-49 199.1 167 59.3
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 3.4e-47 192.6 126 73.8
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 2.4e-45 186.4 165 54.5
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 9.2e-45 184.5 167 53.9
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 7.8e-44 181.4 186 52.2
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 1.9e-42 176.8 128 67.2
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 7.3e-42 174.9 168 50.0
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 4.0e-40 169.1 176 50.6
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 2.4e-37 159.8 93 76.3
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 4.3e-34 149.1 107 70.1
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 5.6e-34 148.7 85 80.0
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 2.1e-33 146.7 121 59.5
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 4.7e-33 145.6 123 58.5
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 6.2e-33 145.2 98 70.4
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 8.4e-30 134.8 84 75.0
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 5.4e-29 132.1 114 59.6
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 2.4e-24 116.7 95 60.0
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 1.2e-23 114.4 123 49.6
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 4.4e-23 112.5 63 77.8
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 9.9e-23 111.3 70 81.4
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 2.9e-22 109.8 129 45.7
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 3.2e-21 106.3 120 50.0
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 1.5e-18 97.4 99 56.6
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 5.3e-16 89.0 54 77.8
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 1.3e-14 84.3 71 64.8
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 2.1e-12 77.0 71 60.6
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 5.1e-11 72.4 109 33.0
MD11G1262900 Malus domestica HOM05D006215 ORTHO05D007719 3.3e-10 69.7 39 84.6
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 7.4e-10 68.6 48 70.8
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 1.4e-08 64.3 43 67.4

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (5 genes)
Brassica napus (6 genes)
Brassica oleracea (3 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (3 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (1 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings