Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005455 Camellia sinensis var. sinensis HOM05D005134 ORTHO05D006548 7.1e-192 673.7 325 100.0
Dinv14615 Davidia involucrata HOM05D005134 ORTHO05D006548 1.8e-126 456.4 300 74.0
Actinidia34743 Actinidia chinensis HOM05D005134 ORTHO05D006548 5.5e-120 434.9 341 66.0
vmacro02444 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 1.7e-113 413.3 312 67.6
TAR365G0228 Trochodendron aralioides HOM05D005134 ORTHO05D006548 1.9e-112 409.8 303 67.3
TAR636G3303 Trochodendron aralioides HOM05D005134 ORTHO05D006548 9.8e-109 397.5 306 65.0
GSVIVG01036192001 Vitis vinifera HOM05D005134 ORTHO05D006548 1.8e-107 393.3 306 64.7
Cpa.g.sc162.33 Carica papaya HOM05D005134 ORTHO05D006548 5.9e-106 388.3 237 76.8
Manes.09G148800 Manihot esculenta HOM05D005134 ORTHO05D006548 2.3e-105 386.3 298 64.8
Nn1g02742 Nelumbo nucifera HOM05D005134 ORTHO05D006548 2.9e-105 386.0 306 64.7
QL03p031652 Quercus lobata HOM05D005134 ORTHO05D006548 7.3e-104 381.3 285 68.1
QL09p031144 Quercus lobata HOM05D005134 ORTHO05D006548 7.3e-104 381.3 285 68.1
Thecc.05G272900 Theobroma cacao HOM05D005134 ORTHO05D006548 7.3e-104 381.3 306 66.0
Lj5g0005697 Lotus japonicus HOM05D005134 ORTHO05D006548 1.6e-103 380.2 309 62.1
TWI63G1834 Tripterygium wilfordii HOM05D005134 ORTHO05D006548 1.6e-103 380.2 224 77.7
CiPaw.08G117800 Carya illinoinensis HOM05D005134 ORTHO05D006548 3.6e-103 379.0 302 63.9
MD12G1246100 Malus domestica HOM05D005134 ORTHO05D006548 1.4e-102 377.1 299 65.6
Gohir.D13G173500 Gossypium hirsutum HOM05D005134 ORTHO05D006548 4.0e-102 375.6 228 76.3
Sc09g0004160 Simmondsia chinensis HOM05D005134 ORTHO05D006548 1.2e-101 374.0 297 64.3
RcHm_v2.0_Chr3g0449951 Rosa chinensis HOM05D005134 ORTHO05D006548 9.8e-101 370.9 296 63.5
Prupe.6G348800 Prunus persica HOM05D005134 ORTHO05D006548 1.3e-100 370.5 301 63.5
Duzib177G0085 Durio zibethinus HOM05D005134 ORTHO05D006548 1.7e-100 370.2 304 62.8
FvH4_6g02180 Fragaria vesca HOM05D005134 ORTHO05D006548 2.9e-100 369.4 295 64.4
Gorai.013G187000 Gossypium raimondii HOM05D005134 ORTHO05D006548 3.7e-100 369.0 298 62.8
Rhsim13G0009400 Rhododendron simsii HOM05D005134 ORTHO05D006548 4.9e-100 368.6 299 64.9
THA.LOC104807079 Tarenaya hassleriana HOM05D005134 ORTHO05D006548 4.9e-100 368.6 228 73.2
MBI18_g13184_MAGBIO Magnolia biondii HOM05D005134 ORTHO05D006548 6.4e-100 368.2 218 78.4
Phvul.L001688 Phaseolus vulgaris HOM05D005134 ORTHO05D006548 6.4e-100 368.2 227 74.9
Gohir.A13G168200 Gossypium hirsutum HOM05D005134 ORTHO05D006548 8.3e-100 367.9 228 76.3
Potri.019G017900 Populus trichocarpa HOM05D005134 ORTHO05D006548 1.1e-99 367.5 251 71.7
FAN05G3609 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.4e-99 367.1 295 64.1
Glyma.10G166800 Glycine max HOM05D005134 ORTHO05D006548 3.2e-99 365.9 313 60.7
VMungo0720G0573 Vigna mungo HOM05D005134 ORTHO05D006548 5.4e-99 365.2 227 74.0
Ciclev10001967m.g Citrus clementina HOM05D005134 ORTHO05D006548 7.0e-99 364.8 301 62.1
FAN14G0587 Fragaria x ananassa HOM05D005134 ORTHO05D006548 9.2e-99 364.4 295 63.7
CsaV3_2G003750 Cucumis sativus L. HOM05D005134 ORTHO05D006548 2.7e-98 362.8 230 73.0
PGR004G2085 Punica granatum HOM05D005134 ORTHO05D006548 2.7e-98 362.8 227 73.1
MELO3C004420.2 Cucumis melo HOM05D005134 ORTHO05D006548 3.5e-98 362.5 230 73.5
Medtr1g079925 Medicago truncatula HOM05D005134 ORTHO05D006548 4.6e-98 362.1 311 59.2
Sabra13G0042100 Salix brachista HOM05D005134 ORTHO05D006548 1.0e-97 360.9 216 77.8
Lalb_Chr02g0149171 Lupinus albus HOM05D005134 ORTHO05D006548 1.7e-97 360.1 231 73.6
Eucgr.H04250 Eucalyptus grandis HOM05D005134 ORTHO05D006548 2.3e-97 359.8 257 68.1
Aa31LG2G12350 Aethionema arabicum HOM05D005134 ORTHO05D006548 3.0e-97 359.4 236 69.9
CDE02G0996 Ceratophyllum demersum HOM05D005134 ORTHO05D006548 3.0e-97 359.4 224 72.3
Aqoxy5G00231 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 3.9e-97 359.0 223 74.0
Potri.013G045800 Populus trichocarpa HOM05D005134 ORTHO05D006548 5.0e-97 358.6 218 77.1
PSO170G6910 Papaver somniferum HOM05D005134 ORTHO05D006548 6.6e-97 358.2 217 76.0
Hma1.2p1_1006F.1_g247010 Hydrangea macrophylla HOM05D005134 ORTHO05D006548 8.6e-97 357.8 216 77.8
Lj3A700T11 Lonicera japonica HOM05D005134 ORTHO05D006548 1.1e-96 357.5 220 74.1
FAN05G5817 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.5e-96 357.1 295 62.4
Nitab4.5_0000044g0220 Nicotiana tabacum HOM05D005134 ORTHO05D006548 1.5e-96 357.1 237 72.2
TPR.G32267 Trifolium pratense HOM05D005134 ORTHO05D006548 1.5e-96 357.1 314 59.6
Nitab4.5_0011884g0010 Nicotiana tabacum HOM05D005134 ORTHO05D006548 4.3e-96 355.5 225 73.8
Eucgr.H04279 Eucalyptus grandis HOM05D005134 ORTHO05D006548 5.6e-96 355.1 257 66.9
Manes.08G138000 Manihot esculenta HOM05D005134 ORTHO05D006548 7.3e-96 354.8 250 70.0
Actinidia04451 Actinidia chinensis HOM05D005134 ORTHO05D006548 2.1e-95 353.2 223 74.0
Peaxi162Scf00409g00421 Petunia axillaris HOM05D005134 ORTHO05D006548 2.8e-95 352.8 225 74.7
CANSAT54G0719 Cannabis sativa HOM05D005134 ORTHO05D006548 3.6e-95 352.4 224 72.8
Atru.chr6.1561 Acer truncatum HOM05D005134 ORTHO05D006548 6.2e-95 351.7 297 59.9
Sed0011924 Sechium edule HOM05D005134 ORTHO05D006548 4.0e-94 349.0 226 73.0
Haze_04438 Corylus avellana HOM05D005134 ORTHO05D006548 5.2e-94 348.6 255 68.6
Sed0016660 Sechium edule HOM05D005134 ORTHO05D006548 5.2e-94 348.6 229 72.9
COL.COLO4_15462 Corchorus olitorius HOM05D005134 ORTHO05D006548 8.9e-94 347.8 300 61.3
Rhsim04G0183700 Rhododendron simsii HOM05D005134 ORTHO05D006548 8.9e-94 347.8 217 74.7
Sopen09g032960 Solanum pennellii HOM05D005134 ORTHO05D006548 8.9e-94 347.8 233 72.5
CARHR110960 Cardamine hirsuta HOM05D005134 ORTHO05D006548 1.5e-93 347.1 223 70.4
arahy.Tifrunner.gnm1.ann1.JQR6X4 Arachis hypogaea HOM05D005134 ORTHO05D006548 2.0e-93 346.7 287 59.6
GSVIVG01027798001 Vitis vinifera HOM05D005134 ORTHO05D006548 2.0e-93 346.7 208 75.5
Glyma.20G222300 Glycine max HOM05D005134 ORTHO05D006548 2.6e-93 346.3 244 68.4
arahy.Tifrunner.gnm1.ann1.MCCA8X Arachis hypogaea HOM05D005134 ORTHO05D006548 7.5e-93 344.7 287 59.2
Carub.0003s3480 Capsella rubella HOM05D005134 ORTHO05D006548 7.5e-93 344.7 308 57.5
CAN.G793.56 Capsicum annuum HOM05D005134 ORTHO05D006548 7.5e-93 344.7 221 73.8
MSTRG.21911 Avicennia marina HOM05D005134 ORTHO05D006548 1.3e-92 344.0 229 72.1
AL3G53380 Arabidopsis lyrata HOM05D005134 ORTHO05D006548 1.7e-92 343.6 287 57.8
AUR62002121 Chenopodium quinoa HOM05D005134 ORTHO05D006548 2.2e-92 343.2 222 71.2
Cc03_g05430 Coffea canephora HOM05D005134 ORTHO05D006548 2.2e-92 343.2 218 72.9
Oeu028977.1 Olea europaea HOM05D005134 ORTHO05D006548 2.9e-92 342.8 220 72.3
Aqoxy2G03635 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 4.9e-92 342.0 291 60.8
PGSC0003DMG400017174 Solanum tuberosum HOM05D005134 ORTHO05D006548 4.9e-92 342.0 224 73.7
ClCG02G016990 Citrullus lanatus HOM05D005134 ORTHO05D006548 6.4e-92 341.7 312 57.7
Thhalv10027851m.g Eutrema salsugineum HOM05D005134 ORTHO05D006548 1.1e-91 340.9 256 63.3
SpUn0001_1010 Schrenkiella parvula HOM05D005134 ORTHO05D006548 1.1e-91 340.9 217 72.8
EL10Ac3g05020 Beta vulgaris HOM05D005134 ORTHO05D006548 3.2e-91 339.3 222 70.3
Migut.N00267 Erythranthe guttata HOM05D005134 ORTHO05D006548 3.2e-91 339.3 221 73.8
HPP92_015212 Vanilla planifolia HOM05D005134 ORTHO05D006548 3.2e-91 339.3 237 68.4
PSO173G0035 Papaver somniferum HOM05D005134 ORTHO05D006548 2.0e-90 336.7 252 63.9
AT2G20410 Arabidopsis thaliana HOM05D005134 ORTHO05D006548 2.7e-90 336.3 306 55.9
AUR62028240 Chenopodium quinoa HOM05D005134 ORTHO05D006548 2.7e-90 336.3 274 62.0
Hund06912 Selenicereus undatus HOM05D005134 ORTHO05D006548 7.8e-90 334.7 291 59.1
FAN02G2775 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.0e-89 334.3 363 51.8
HPP92_025481 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.0e-89 334.3 214 72.9
ATR0730G220 Amborella trichopoda HOM05D005134 ORTHO05D006548 1.1e-88 330.9 213 72.3
Zm00001eb210280 Zea mays HOM05D005134 ORTHO05D006548 1.1e-88 330.9 214 73.4
Ah.04g155980 Amaranthus hybridus HOM05D005134 ORTHO05D006548 1.5e-88 330.5 220 71.8
BcaB04g20137 Brassica carinata HOM05D005134 ORTHO05D006548 4.3e-88 328.9 223 67.7
Solyc09g090050.4 Solanum lycopersicum HOM05D005134 ORTHO05D006548 9.5e-88 327.8 203 74.4
SalBow3G1367 Salvia bowleyana HOM05D005134 ORTHO05D006548 1.6e-87 327.0 231 67.5
SEGI_05528 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 1.6e-87 327.0 214 68.2
EL10Ac4g09067 Beta vulgaris HOM05D005134 ORTHO05D006548 4.7e-87 325.5 222 69.8
Lsat_1_v5_gn_3_118860 Lactuca sativa HOM05D005134 ORTHO05D006548 1.4e-86 323.9 217 67.7
SHI23170 Sapria himalayana HOM05D005134 ORTHO05D006548 1.4e-86 323.9 221 69.7
Hund03036 Selenicereus undatus HOM05D005134 ORTHO05D006548 1.8e-86 323.6 250 62.8
HanXRQChr03g0091791 Helianthus annuus HOM05D005134 ORTHO05D006548 4.0e-86 322.4 233 63.9
unitig_0.g910 Utricularia gibba HOM05D005134 ORTHO05D006548 5.2e-86 322.0 212 72.2
ECA240G2747 Erigeron canadensis HOM05D005134 ORTHO05D006548 4.4e-85 318.9 233 67.0
BcaC09g49624 Brassica carinata HOM05D005134 ORTHO05D006548 1.3e-84 317.4 218 67.0
C01p34370 Brassica napus HOM05D005134 ORTHO05D006548 2.2e-84 316.6 218 67.0
BolC1t03407H Brassica oleracea HOM05D005134 ORTHO05D006548 2.2e-84 316.6 218 67.0
Eucgr.H04252 Eucalyptus grandis HOM05D005134 ORTHO05D006548 2.3e-81 306.6 307 55.0
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 1.9e-80 303.5 191 77.0
GSVIVG01027796001 Vitis vinifera HOM05D005134 ORTHO05D006548 6.4e-76 288.5 178 75.8
FAN09G4497 Fragaria x ananassa HOM05D005134 ORTHO05D006548 4.1e-75 285.8 247 60.7
Actinidia38945 Actinidia chinensis HOM05D005134 ORTHO05D006548 7.1e-75 285.0 307 53.4
vmacro08495 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 9.2e-75 284.6 359 44.6
Ca_10010_v3 Cicer arietinum L. HOM05D005134 ORTHO05D006548 3.5e-74 282.7 257 57.2
MD04G1229000 Malus domestica HOM05D005134 ORTHO05D006548 7.3e-72 275.0 330 50.0
AUR62004857 Chenopodium quinoa HOM05D005134 ORTHO05D006548 2.6e-69 266.5 222 61.7
Mapoly0025s0138 Marchantia polymorpha HOM05D005134 ORTHO05D006548 3.8e-68 262.7 248 51.2
Ah.06g191930 Amaranthus hybridus HOM05D005134 ORTHO05D006548 5.4e-67 258.8 253 54.9
Eucgr.H04289 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.0e-65 254.6 230 57.8
AUR62040940 Chenopodium quinoa HOM05D005134 ORTHO05D006548 1.4e-59 234.2 190 58.4
SMO367G0112 Selaginella moellendorffii HOM05D005134 ORTHO05D006548 3.2e-59 233.0 162 64.2
HPP92_015224 Vanilla planifolia HOM05D005134 ORTHO05D006548 3.2e-59 233.0 237 52.7
SGA_v2.0_scaffold308G48086 Striga asiatica HOM05D005134 ORTHO05D006548 2.7e-58 229.9 129 76.7
DCAR_002321 Daucus carota HOM05D005134 ORTHO05D006548 7.4e-56 221.9 164 65.9
Actinidia01853 Actinidia chinensis HOM05D005134 ORTHO05D006548 1.3e-55 221.1 216 53.7
Os03g0860000 Oryza sativa ssp. japonica HOM05D005134 ORTHO05D006548 6.2e-55 218.8 129 72.9
Eucgr.H04247 Eucalyptus grandis HOM05D005134 ORTHO05D006548 4.0e-54 216.1 127 73.2
Dinv29871 Davidia involucrata HOM05D005134 ORTHO05D006548 1.2e-50 204.5 190 57.9
Psat6g143200 Pisum sativum HOM05D005134 ORTHO05D006548 6.2e-47 192.2 227 48.5
SEGI_11048 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 8.4e-44 181.8 151 57.6
AagrBONN_evm.TU.Sc2ySwM_344.1164 Anthoceros agrestis HOM05D005134 ORTHO05D006548 2.7e-42 176.8 124 58.9
vmacro02443 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 5.9e-37 159.1 95 75.8
Cre16.g655100 Chlamydomonas reinhardtii HOM05D005134 ORTHO05D006548 1.9e-35 154.1 197 41.1
Manes.15G040000 Manihot esculenta HOM05D005134 ORTHO05D006548 4.8e-31 139.4 90 71.1
Eucgr.H04286 Eucalyptus grandis HOM05D005134 ORTHO05D006548 5.5e-27 125.9 133 52.6
Duzib177G1154 Durio zibethinus HOM05D005134 ORTHO05D013855 1.0e-20 105.1 162 44.4
FAN14G5434 Fragaria x ananassa HOM05D005134 ORTHO05D006548 7.4e-16 89.0 143 44.1
RcHm_v2.0_Chr6g0274061 Rosa chinensis HOM05D005134 ORTHO05D006548 2.7e-10 70.5 71 57.7
FAN06G2241 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.2e-08 65.1 32 84.4

Acer truncatum (1 genes)
Actinidia chinensis (4 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (2 genes)
Brassica carinata (2 genes)
Brassica napus (1 genes)
Brassica oleracea (1 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (4 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (6 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (7 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (3 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (3 genes)
Vanilla planifolia (3 genes)
Vigna mungo (1 genes)
Vitis vinifera (3 genes)
Zea mays (1 genes)

Program Settings