Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.2e-184 647.9 332 100.0
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 8.6e-169 597.0 332 93.1
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 2.1e-167 592.4 327 92.4
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 6.8e-166 587.4 329 90.0
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.5e-165 586.3 332 90.1
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 4.4e-165 584.7 328 90.2
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 9.8e-165 583.6 332 89.5
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 2.2e-164 582.4 332 88.9
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 4.9e-164 581.3 332 88.6
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 6.4e-164 580.9 332 88.9
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 6.4e-164 580.9 332 88.6
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 8.3e-164 580.5 332 88.6
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 1.1e-163 580.1 332 88.9
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 3.2e-163 578.6 359 84.4
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 5.4e-163 577.8 333 88.6
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 7.0e-163 577.4 325 90.8
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 1.2e-162 576.6 332 87.7
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 3.5e-162 575.1 332 88.3
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 7.8e-162 573.9 333 88.3
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 1.0e-161 573.5 332 87.7
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 2.3e-161 572.4 330 88.5
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.5e-160 569.7 333 87.4
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.5e-160 569.7 333 87.4
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 2.5e-160 568.9 328 87.5
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 2.5e-160 568.9 328 88.1
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 3.3e-160 568.5 330 87.9
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 5.6e-160 567.8 325 88.9
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.2e-159 566.6 327 86.9
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 1.2e-159 566.6 335 86.0
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 1.6e-159 566.2 329 86.9
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 4.7e-159 564.7 323 88.5
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 4.7e-159 564.7 327 87.2
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 1.8e-158 562.8 329 86.9
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 2.3e-158 562.4 328 85.7
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 5.2e-158 561.2 327 86.2
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 5.2e-158 561.2 329 86.6
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 8.9e-158 560.5 329 86.0
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 8.9e-158 560.5 332 84.9
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.2e-157 560.1 332 84.9
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.5e-157 559.7 327 86.2
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 2.6e-157 558.9 332 84.6
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 3.4e-157 558.5 332 86.1
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 4.4e-157 558.1 327 85.9
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 4.4e-157 558.1 327 85.9
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 5.8e-157 557.8 326 85.9
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 5.8e-157 557.8 329 86.3
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 9.9e-157 557.0 327 85.6
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 9.9e-157 557.0 332 85.8
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 9.9e-157 557.0 330 85.8
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 9.9e-157 557.0 327 85.6
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.3e-156 556.6 332 84.3
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 2.9e-156 555.4 329 86.0
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.1e-155 553.5 329 85.4
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 1.1e-155 553.5 328 84.8
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 3.2e-155 552.0 327 85.3
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 9.2e-155 550.4 332 84.0
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 2.7e-154 548.9 371 78.4
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 2.7e-154 548.9 328 85.1
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 2.7e-154 548.9 332 83.7
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 3.5e-154 548.5 332 83.4
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 7.8e-154 547.4 332 83.4
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 7.8e-154 547.4 328 83.8
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 1.7e-153 546.2 332 83.4
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 5.1e-153 544.7 332 82.5
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 6.6e-153 544.3 327 84.1
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 2.5e-152 542.3 328 83.5
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 5.6e-152 541.2 332 82.5
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 5.6e-152 541.2 332 82.5
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 7.3e-152 540.8 332 81.6
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 1.6e-151 539.7 338 81.7
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 3.6e-151 538.5 331 81.6
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 1.4e-150 536.6 386 74.6
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 1.8e-150 536.2 300 90.0
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 5.2e-150 534.6 331 81.9
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 6.8e-150 534.3 329 80.5
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 6.8e-150 534.3 327 84.1
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.5e-149 533.1 331 80.1
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 1.5e-149 533.1 331 81.6
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 1.5e-149 533.1 329 80.5
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 2.0e-149 532.7 323 83.3
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 4.4e-149 531.6 329 80.2
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 5.8e-149 531.2 329 80.2
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 5.8e-149 531.2 329 80.2
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 5.8e-149 531.2 329 80.2
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 5.8e-149 531.2 329 80.2
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 7.6e-149 530.8 329 79.9
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 9.9e-149 530.4 329 79.9
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.3e-148 530.0 331 80.4
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.9e-148 528.9 331 80.1
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 2.9e-148 528.9 332 82.2
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 6.4e-148 527.7 329 79.3
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 1.6e-146 523.1 455 63.7
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.0e-145 520.4 314 82.2
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.3e-145 520.0 302 90.4
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 1.9e-144 516.2 329 78.4
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.5e-144 515.8 305 84.6
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.6e-143 513.1 338 79.0
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.1e-142 510.4 325 78.8
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 9.0e-142 507.3 333 80.5
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 7.6e-141 504.2 330 77.9
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 4.9e-140 501.5 328 77.1
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 2.4e-139 499.2 328 78.4
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 2.3e-137 492.7 326 81.0
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 2.5e-136 489.2 332 75.3
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 2.1e-135 486.1 330 73.6
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 4.8e-135 485.0 333 74.8
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 9.0e-134 480.7 329 77.8
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.5e-133 478.4 377 68.2
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 4.2e-131 471.9 332 74.7
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 9.3e-131 470.7 335 76.1
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 3.3e-128 462.2 326 71.2
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 4.9e-124 448.4 277 80.5
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 8.4e-124 447.6 233 98.7
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 8.7e-121 437.6 323 73.1
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 8.2e-111 404.4 323 61.9
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 1.5e-109 400.2 330 62.7
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 2.6e-109 399.4 319 62.7
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 6.5e-108 394.8 234 83.8
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 4.4e-96 355.5 274 67.2
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 4.8e-95 352.1 321 59.2
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 6.9e-94 348.2 227 78.9
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.2e-92 343.2 338 61.8
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 1.9e-91 340.1 197 87.3
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.3e-87 327.4 235 68.9
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 1.3e-84 317.4 335 55.2
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 8.0e-82 308.1 220 74.5
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 3.0e-81 306.2 167 91.6
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 4.4e-80 302.4 220 72.7
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.5e-75 287.3 220 70.9
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 5.5e-75 285.4 165 87.3
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 5.2e-73 278.9 333 44.7
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 1.0e-68 264.6 165 80.6
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 2.3e-68 263.5 279 57.7
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 6.3e-63 245.4 329 47.1
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 2.0e-61 240.4 135 88.1
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 2.9e-55 219.9 130 85.4
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.9e-43 180.6 103 85.4
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 1.1e-38 164.9 150 57.3
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 4.1e-38 162.9 204 50.5
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 5.4e-38 162.5 162 54.3
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 3.0e-36 156.8 92 88.0
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 5.1e-36 156.0 87 85.1
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 8.6e-36 155.2 103 74.8
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 4.9e-31 139.4 88 77.3
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 1.9e-30 137.5 69 91.3
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 4.2e-30 136.3 91 80.2
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.2e-30 136.3 77 89.6
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 4.6e-29 132.9 80 81.2
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 8.7e-28 128.6 74 83.8
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 2.5e-27 127.1 72 83.3
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 9.6e-27 125.2 75 82.7
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 2.6e-24 117.1 77 76.6
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 1.1e-22 111.7 69 79.7
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 2.7e-21 107.1 67 83.6
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 6.2e-18 95.9 65 78.5
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 6.2e-10 69.3 85 49.4
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 3.4e-08 63.5 77 45.5
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 5.8e-08 62.8 33 87.9

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings