Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004779 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 6.9e-86 320.5 148 100.0
CSS0018913 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 6.7e-81 303.9 144 97.2
CSS0001924 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 2.5e-80 302.0 144 96.5
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 3.2e-75 285.0 144 91.0
GSVIVG01019532001 Vitis vinifera HOM05D005474 ORTHO05D006551 4.2e-75 284.6 144 91.7
vmacro11424 Vaccinium macrocarpon HOM05D005474 ORTHO05D006551 3.6e-74 281.6 144 88.9
Rhsim02G0243400 Rhododendron simsii HOM05D005474 ORTHO05D006551 7.9e-74 280.4 144 88.9
Actinidia22160 Actinidia chinensis HOM05D005474 ORTHO05D006551 1.8e-73 279.3 144 89.6
Lj2C167G11 Lonicera japonica HOM05D005474 ORTHO05D006551 1.5e-72 276.2 144 87.5
Cfa012014 Carpinus fangiana HOM05D005474 ORTHO05D006551 3.7e-71 271.6 144 87.5
Haze_09055 Corylus avellana HOM05D005474 ORTHO05D006551 4.8e-71 271.2 144 87.5
Prupe.5G120100 Prunus persica HOM05D005474 ORTHO05D006551 8.2e-71 270.4 137 89.1
TAR629G2557 Trochodendron aralioides HOM05D005474 ORTHO05D006551 1.4e-70 269.6 144 87.5
PGR042G2806 Punica granatum HOM05D005474 ORTHO05D006551 3.1e-70 268.5 137 86.9
FvH4_5g04600 Fragaria vesca HOM05D005474 ORTHO05D006551 9.1e-70 266.9 144 82.6
Glyma.11G017200 Glycine max HOM05D005474 ORTHO05D006551 9.1e-70 266.9 135 85.9
FAN08G2748 Fragaria x ananassa HOM05D005474 ORTHO05D006551 1.2e-69 266.5 144 82.6
CANSAT21G1635 Cannabis sativa HOM05D005474 ORTHO05D006551 1.5e-69 266.2 144 81.9
FAN04G1263 Fragaria x ananassa HOM05D005474 ORTHO05D006551 1.5e-69 266.2 144 82.6
FAN18G3330 Fragaria x ananassa HOM05D005474 ORTHO05D006551 1.5e-69 266.2 144 82.6
QL02p030435 Quercus lobata HOM05D005474 ORTHO05D006551 1.5e-69 266.2 139 87.1
RcHm_v2.0_Chr7g0194791 Rosa chinensis HOM05D005474 ORTHO05D006551 2.0e-69 265.8 144 83.3
Aqoxy7G00102 Aquilegia oxysepala HOM05D005474 ORTHO05D006551 3.4e-69 265.0 144 83.3
TAR374G0037 Trochodendron aralioides HOM05D005474 ORTHO05D006551 3.4e-69 265.0 144 84.7
FAN18G1504 Fragaria x ananassa HOM05D005474 ORTHO05D006551 4.5e-69 264.6 144 81.9
FAN13G0565 Fragaria x ananassa HOM05D005474 ORTHO05D006551 5.9e-69 264.2 144 81.9
MD14G1128900 Malus domestica HOM05D005474 ORTHO05D006551 5.9e-69 264.2 137 88.3
Cc08_g16070 Coffea canephora HOM05D005474 ORTHO05D006551 7.7e-69 263.8 144 83.3
CiPaw.11G121500 Carya illinoinensis HOM05D005474 ORTHO05D006551 1.0e-68 263.5 144 83.3
CAN.G532.121 Capsicum annuum HOM05D005474 ORTHO05D006551 1.3e-68 263.1 144 84.0
Glyma.01G225700 Glycine max HOM05D005474 ORTHO05D006551 2.2e-68 262.3 135 85.2
SalBow8G3265 Salvia bowleyana HOM05D005474 ORTHO05D006551 3.8e-68 261.5 144 79.9
Migut.E01253 Erythranthe guttata HOM05D005474 ORTHO05D006551 1.1e-67 260.0 144 80.6
Eucgr.D01738 Eucalyptus grandis HOM05D005474 ORTHO05D006551 1.1e-67 260.0 144 81.2
ClCG01G001840 Citrullus lanatus HOM05D005474 ORTHO05D006551 1.4e-67 259.6 144 81.9
Ciclev10020308m.g Citrus clementina HOM05D005474 ORTHO05D006551 1.4e-67 259.6 144 79.2
Lsat_1_v5_gn_6_83981 Lactuca sativa HOM05D005474 ORTHO05D006551 1.4e-67 259.6 144 81.9
MD06G1107100 Malus domestica HOM05D005474 ORTHO05D006551 1.4e-67 259.6 144 83.3
Nitab4.5_0002782g0080 Nicotiana tabacum HOM05D005474 ORTHO05D006551 1.4e-67 259.6 144 81.9
Oeu063522.1 Olea europaea HOM05D005474 ORTHO05D006551 1.9e-67 259.2 148 79.7
CsaV3_5G001990 Cucumis sativus L. HOM05D005474 ORTHO05D006551 2.5e-67 258.8 144 81.9
MSTRG.13885 Avicennia marina HOM05D005474 ORTHO05D006551 1.2e-66 256.5 144 78.5
Ca_24501_v3 Cicer arietinum L. HOM05D005474 ORTHO05D006551 1.2e-66 256.5 135 82.2
Ca_29734_v3 Cicer arietinum L. HOM05D005474 ORTHO05D006551 1.2e-66 256.5 135 82.2
MELO3C005754.2 Cucumis melo HOM05D005474 ORTHO05D006551 1.2e-66 256.5 144 81.2
Psat2g185600 Pisum sativum HOM05D005474 ORTHO05D006551 1.2e-66 256.5 144 77.8
PGSC0003DMG400012286 Solanum tuberosum HOM05D005474 ORTHO05D006551 1.2e-66 256.5 144 80.6
Sopen08g030580 Solanum pennellii HOM05D005474 ORTHO05D006551 2.1e-66 255.8 144 80.6
SGA_v2.0_scaffold144G35858 Striga asiatica HOM05D005474 ORTHO05D006551 2.7e-66 255.4 144 77.1
Medtr5g009240 Medicago truncatula HOM05D005474 ORTHO05D006551 4.7e-66 254.6 144 78.5
Sed0020716 Sechium edule HOM05D005474 ORTHO05D006551 4.7e-66 254.6 144 79.9
Phvul.002G164600 Phaseolus vulgaris HOM05D005474 ORTHO05D006551 6.1e-66 254.2 144 79.2
Sed0014344 Sechium edule HOM05D005474 ORTHO05D006551 6.1e-66 254.2 144 79.9
VMungo1215G0769 Vigna mungo HOM05D005474 ORTHO05D006551 6.1e-66 254.2 135 82.2
MBI06_g08456_MAGBIO Magnolia biondii HOM05D005474 ORTHO05D006551 1.0e-65 253.4 144 80.6
Cpa.g.sc128.67 Carica papaya HOM05D005474 ORTHO05D006551 1.8e-65 252.7 138 81.2
Manes.01G049100 Manihot esculenta HOM05D005474 ORTHO05D006551 1.8e-65 252.7 137 82.5
PSO063G4762 Papaver somniferum HOM05D005474 ORTHO05D006551 1.8e-65 252.7 144 81.2
Solyc08g082320.3 Solanum lycopersicum HOM05D005474 ORTHO05D006551 2.3e-65 252.3 144 79.9
TPR.G25600 Trifolium pratense HOM05D005474 ORTHO05D006551 3.0e-65 251.9 135 80.7
PSO170G1345 Papaver somniferum HOM05D005474 ORTHO05D006551 8.8e-65 250.4 144 80.6
Atru.chr9.1979 Acer truncatum HOM05D005474 ORTHO05D006551 1.1e-64 250.0 139 79.9
unitig_0.g387 Utricularia gibba HOM05D005474 ORTHO05D006551 1.1e-64 250.0 146 78.1
Atru.chr9.1994 Acer truncatum HOM05D005474 ORTHO05D006551 2.0e-64 249.2 139 79.9
CSS0034140 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 2.0e-64 249.2 115 95.7
CDE02G2859 Ceratophyllum demersum HOM05D002290 ORTHO05D002532 2.6e-64 248.8 144 79.2
SalBow1G8106 Salvia bowleyana HOM05D005474 ORTHO05D006551 4.4e-64 248.1 144 76.4
Thecc.03G298100 Theobroma cacao HOM05D005474 ORTHO05D006551 9.7e-64 246.9 139 76.3
SalBow1G1678 Salvia bowleyana HOM05D005474 ORTHO05D006551 1.3e-63 246.5 144 75.7
Lalb_Chr05g0211531 Lupinus albus HOM05D005474 ORTHO05D006551 1.7e-63 246.1 140 79.3
COL.COLO4_10702 Corchorus olitorius HOM05D005474 ORTHO05D006551 2.2e-63 245.7 144 73.6
Duzib084G1138 Durio zibethinus HOM05D005474 ORTHO05D006551 2.8e-63 245.4 139 76.3
Potri.003G140000 Populus trichocarpa HOM05D005474 ORTHO05D006551 2.8e-63 245.4 144 77.8
Sc22g0005000 Simmondsia chinensis HOM05D005474 ORTHO05D006551 3.7e-63 245.0 144 76.4
Hund14220 Selenicereus undatus HOM05D005474 ORTHO05D006551 4.8e-63 244.6 144 73.6
arahy.Tifrunner.gnm1.ann1.Z0ACGZ Arachis hypogaea HOM05D005474 ORTHO05D006551 1.1e-62 243.4 160 69.4
Gohir.A12G236400 Gossypium hirsutum HOM05D005474 ORTHO05D006551 1.1e-62 243.4 135 77.8
Gohir.D12G237600 Gossypium hirsutum HOM05D005474 ORTHO05D006551 1.1e-62 243.4 135 77.8
Gorai.008G254400 Gossypium raimondii HOM05D005474 ORTHO05D006551 1.1e-62 243.4 135 77.8
ATR0602G179 Amborella trichopoda HOM05D005474 ORTHO05D006551 1.8e-62 242.7 144 77.8
Potri.001G091600 Populus trichocarpa HOM05D005474 ORTHO05D006551 9.1e-62 240.4 144 76.4
ECA240G1977 Erigeron canadensis HOM05D005474 ORTHO05D006551 1.6e-61 239.6 142 76.8
AUR62010840 Chenopodium quinoa HOM05D005474 ORTHO05D006551 2.6e-61 238.8 144 72.9
AUR62019839 Chenopodium quinoa HOM05D005474 ORTHO05D006551 2.6e-61 238.8 144 72.9
Lalb_Chr16g0376951 Lupinus albus HOM05D005474 ORTHO05D006551 5.9e-61 237.7 140 76.4
Sabra01G0068000 Salix brachista HOM05D005474 ORTHO05D006551 5.9e-61 237.7 148 75.7
TWI56G1439 Tripterygium wilfordii HOM05D005474 ORTHO05D006551 7.7e-61 237.3 144 73.6
TWI12G0204 Tripterygium wilfordii HOM05D005474 ORTHO05D006551 1.0e-60 236.9 144 74.3
LjContig00312_ERROPOS870357g0016174 Lotus japonicus HOM05D005474 ORTHO05D006551 2.2e-60 235.7 139 73.4
Aa31LG6G7070 Aethionema arabicum HOM05D005474 ORTHO05D006551 2.9e-60 235.3 135 76.3
THA.LOC104806435 Tarenaya hassleriana HOM05D005474 ORTHO05D006551 3.8e-60 235.0 139 74.8
EL10Ac5g12915 Beta vulgaris HOM05D005474 ORTHO05D006551 5.0e-60 234.6 139 74.8
Zm00001eb277940 Zea mays HOM05D005474 ORTHO05D006551 6.5e-60 234.2 135 77.0
AL7G29500 Arabidopsis lyrata HOM05D005474 ORTHO05D006551 8.5e-60 233.8 137 74.5
Os06g0529800 Oryza sativa ssp. japonica HOM05D005474 ORTHO05D006551 1.5e-59 233.0 137 76.6
BcaNung01092 Brassica carinata HOM05D005474 ORTHO05D006551 1.9e-59 232.6 140 74.3
HPP92_026770 Vanilla planifolia HOM05D005474 ORTHO05D006551 1.9e-59 232.6 144 72.9
Carub.0007s1727 Capsella rubella HOM05D005474 ORTHO05D006551 2.5e-59 232.3 138 73.2
TAR636G0569 Trochodendron aralioides HOM05D005474 ORTHO05D006551 3.2e-59 231.9 126 83.3
CARHR231240 Cardamine hirsuta HOM05D005474 ORTHO05D006551 5.5e-59 231.1 137 73.0
AT4G23860 Arabidopsis thaliana HOM05D005474 ORTHO05D006551 7.2e-59 230.7 141 72.3
Sabra03G0101000 Salix brachista HOM05D005474 ORTHO05D006551 7.2e-59 230.7 159 69.2
BraA01t01454Z Brassica rapa HOM05D005474 ORTHO05D006551 1.6e-58 229.6 139 72.7
Sp7g21810 Schrenkiella parvula HOM05D005474 ORTHO05D006551 1.6e-58 229.6 140 72.1
PGSC0003DMG401028714 Solanum tuberosum HOM05D005474 ORTHO05D006551 1.6e-58 229.6 144 75.0
BcaC09g50941 Brassica carinata HOM05D005474 ORTHO05D006551 2.7e-58 228.8 139 71.9
A01p15160 Brassica napus HOM05D005474 ORTHO05D006551 2.7e-58 228.8 139 71.9
C01p19060 Brassica napus HOM05D005474 ORTHO05D006551 2.7e-58 228.8 139 71.9
BolC1t01832H Brassica oleracea HOM05D005474 ORTHO05D006551 2.7e-58 228.8 139 71.9
Thhalv10025382m.g Eutrema salsugineum HOM05D005474 ORTHO05D006551 2.7e-58 228.8 137 73.0
arahy.Tifrunner.gnm1.ann1.1UFI8K Arachis hypogaea HOM05D005474 ORTHO05D006551 3.6e-58 228.4 188 59.0
Peaxi162Scf00074g00931 Petunia axillaris HOM05D005474 ORTHO05D006551 6.1e-58 227.6 115 85.2
HanXRQChr03g0083521 Helianthus annuus HOM05D005474 ORTHO05D006551 1.8e-57 226.1 115 84.3
CiPaw.12G083000 Carya illinoinensis HOM05D005474 ORTHO05D006551 5.7e-56 221.1 144 70.8
Pp3c7_4800 Physcomitrium patens HOM05D005474 ORTHO05D006551 5.9e-53 211.1 130 70.0
Mapoly0095s0049 Marchantia polymorpha HOM05D005474 ORTHO05D006551 5.0e-52 208.0 133 68.4
Pp3c18_8230 Physcomitrium patens HOM05D005474 ORTHO05D006551 4.7e-50 201.4 142 63.4
CSS0021446 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 3.0e-49 198.7 91 94.5
SMO200G0193 Selaginella moellendorffii HOM05D005474 ORTHO05D006551 3.4e-48 195.3 137 65.7
Oeu034333.1 Olea europaea HOM05D005474 ORTHO05D006551 1.7e-47 193.0 95 86.3
CBR_g50475 Chara braunii HOM05D005474 ORTHO05D006551 6.1e-42 174.5 136 56.6
PSO017G5523 Papaver somniferum HOM05D005474 ORTHO05D006551 1.7e-39 166.4 95 75.8
Nn3g19016 Nelumbo nucifera HOM05D005474 ORTHO05D006551 1.4e-33 146.7 107 70.1
Hma1.2p1_1746F.1_g300392 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 5.4e-30 134.8 63 87.3
Hma1.2p1_1746F.1_g300400 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 5.4e-30 134.8 63 87.3
Hma1.2p1_1746F.1_g300390 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 5.6e-27 124.8 73 83.6
Hma1.2p1_1746F.1_g300398 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 5.6e-27 124.8 73 83.6
Duzib084G0281 Durio zibethinus HOM05D005474 ORTHO05D006551 7.3e-27 124.4 78 71.8
SEGI_08425 Sequoiadendron giganteum HOM05D005474 ORTHO05D006551 2.6e-24 115.9 66 78.8
DCAR_027700 Daucus carota HOM05D005474 ORTHO05D006551 1.4e-22 110.2 144 41.0
SHI06991 Sapria himalayana HOM05D005474 ORTHO05D006551 1.2e-21 107.1 59 78.0
SEGI_30990 Sequoiadendron giganteum HOM05D005474 ORTHO05D006551 1.3e-20 103.6 63 63.5
CDE08G0829 Ceratophyllum demersum HOM05D005474 ORTHO05D006551 3.9e-20 102.1 68 75.0
Cfa025394 Carpinus fangiana HOM05D005474 ORTHO05D122676 4.6e-13 78.6 145 34.5

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (5 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (4 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (1 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (3 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (3 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings