Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004577 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 1.4e-270 935.6 466 100.0
CSS0007070 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 1.6e-266 922.2 466 98.7
Dinv36732 Davidia involucrata HOM05D005294 ORTHO05D006720 5.5e-214 747.7 462 80.1
Actinidia39748 Actinidia chinensis HOM05D005294 ORTHO05D006720 3.4e-211 738.4 468 80.1
Rhsim05G0031400 Rhododendron simsii HOM05D005294 ORTHO05D006720 4.2e-206 721.5 466 79.2
Lj7C671G8 Lonicera japonica HOM05D005294 ORTHO05D006720 1.3e-199 699.9 461 75.1
vmacro10822 Vaccinium macrocarpon HOM05D005294 ORTHO05D006720 4.2e-198 694.9 500 72.6
Haze_25869 Corylus avellana HOM05D005294 ORTHO05D006720 2.9e-186 655.6 461 70.3
Potri.013G068200 Populus trichocarpa HOM05D005294 ORTHO05D006720 3.5e-184 648.7 461 69.2
Ciclev10008203m.g Citrus clementina HOM05D005294 ORTHO05D006720 7.8e-184 647.5 459 68.2
Nitab4.5_0004011g0060 Nicotiana tabacum HOM05D005294 ORTHO05D006720 1.0e-183 647.1 460 68.7
QL02p063470 Quercus lobata HOM05D005294 ORTHO05D006720 1.9e-182 642.9 461 68.5
CiPaw.03G219800 Carya illinoinensis HOM05D005294 ORTHO05D006720 6.2e-181 637.9 462 67.7
Atru.chr7.1522 Acer truncatum HOM05D005294 ORTHO05D006720 3.4e-179 632.1 465 65.6
Cfa003134 Carpinus fangiana HOM05D005294 ORTHO05D006720 2.9e-178 629.0 461 68.3
GSVIVG01015248001 Vitis vinifera HOM05D005294 ORTHO05D006720 8.3e-178 627.5 465 66.2
Nitab4.5_0001492g0020 Nicotiana tabacum HOM05D005294 ORTHO05D006720 2.4e-177 625.9 462 66.7
Manes.16G105100 Manihot esculenta HOM05D005294 ORTHO05D006720 9.2e-177 624.0 463 66.3
Sabra13G0059500 Salix brachista HOM05D005294 ORTHO05D006720 2.1e-176 622.9 513 62.0
TWI34G0876 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 1.9e-174 616.3 461 65.7
DCAR_012006 Daucus carota HOM05D005294 ORTHO05D006720 4.3e-174 615.1 461 65.9
Sc08g0008210 Simmondsia chinensis HOM05D005294 ORTHO05D006720 5.6e-174 614.8 460 65.0
PGSC0003DMG400033362 Solanum tuberosum HOM05D005294 ORTHO05D006720 8.1e-173 610.9 461 65.3
TAR624G1381 Trochodendron aralioides HOM05D005294 ORTHO05D006720 8.1e-173 610.9 461 65.3
CAN.G142.7 Capsicum annuum HOM05D005294 ORTHO05D006720 1.1e-172 610.5 461 65.3
COL.COLO4_18242 Corchorus olitorius HOM05D005294 ORTHO05D006720 2.6e-171 605.9 469 62.9
Cpa.g.sc32.101 Carica papaya HOM05D005294 ORTHO05D006720 3.7e-170 602.1 453 64.5
Lsat_1_v5_gn_5_146040 Lactuca sativa HOM05D005294 ORTHO05D006720 1.9e-169 599.7 462 63.4
CANSAT64G1758 Cannabis sativa HOM05D005294 ORTHO05D006720 5.4e-169 598.2 461 65.9
MD15G1202500 Malus domestica HOM05D005294 ORTHO05D006720 7.1e-169 597.8 461 63.3
MSTRG.19532 Avicennia marina HOM05D005294 ORTHO05D006720 1.6e-168 596.7 461 64.4
TWI63G0491 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 2.7e-168 595.9 461 63.3
MD02G1072700 Malus domestica HOM05D005294 ORTHO05D006720 4.6e-168 595.1 461 64.0
Gohir.D06G069100 Gossypium hirsutum HOM05D005294 ORTHO05D006720 6.0e-168 594.7 463 63.9
Gorai.010G080700 Gossypium raimondii HOM05D005294 ORTHO05D006720 6.0e-168 594.7 463 63.9
Eucgr.C03688 Eucalyptus grandis HOM05D005294 ORTHO05D006720 1.7e-167 593.2 463 62.9
LjContig00141g0021499 Lotus japonicus HOM05D005294 ORTHO05D006720 1.7e-167 593.2 461 62.0
Gohir.A06G070500 Gossypium hirsutum HOM05D005294 ORTHO05D006720 2.3e-167 592.8 463 63.7
Thecc.09G094300 Theobroma cacao HOM05D005294 ORTHO05D006720 2.3e-167 592.8 446 65.0
Peaxi162Scf01468g00004 Petunia axillaris HOM05D005294 ORTHO05D006720 3.9e-167 592.0 461 65.9
Duzib168G2227 Durio zibethinus HOM05D005294 ORTHO05D006720 5.1e-167 591.7 445 65.4
Lalb_Chr18g0053011 Lupinus albus HOM05D005294 ORTHO05D006720 1.1e-166 590.5 464 61.4
Prupe.7G214700 Prunus persica HOM05D005294 ORTHO05D006720 6.2e-165 584.7 456 63.8
arahy.Tifrunner.gnm1.ann1.CWN4E9 Arachis hypogaea HOM05D005294 ORTHO05D006720 8.1e-165 584.3 461 61.0
arahy.Tifrunner.gnm1.ann1.T94LMP Arachis hypogaea HOM05D005294 ORTHO05D006720 1.4e-164 583.6 461 61.2
Glyma.14G065800 Glycine max HOM05D005294 ORTHO05D006720 4.0e-164 582.0 461 62.5
Glyma.02G250900 Glycine max HOM05D005294 ORTHO05D006720 1.3e-162 577.0 461 61.6
HanXRQChr12g0355321 Helianthus annuus HOM05D005294 ORTHO05D006720 1.3e-162 577.0 470 61.5
ECA234G1346 Erigeron canadensis HOM05D005294 ORTHO05D006720 2.9e-162 575.9 470 62.3
Lalb_Chr15g0084501 Lupinus albus HOM05D005294 ORTHO05D006720 2.9e-162 575.9 454 61.9
Sopen02g017740 Solanum pennellii HOM05D005294 ORTHO05D006720 2.9e-162 575.9 463 62.6
Solyc02g068580.1 Solanum lycopersicum HOM05D005294 ORTHO05D006720 4.9e-162 575.1 463 62.6
PGR102G3363 Punica granatum HOM05D005294 ORTHO05D006720 1.9e-161 573.2 457 58.6
Cc06_g10960 Coffea canephora HOM05D005294 ORTHO05D006720 4.2e-161 572.0 434 65.2
RcHm_v2.0_Chr2g0092581 Rosa chinensis HOM05D005294 ORTHO05D006720 7.8e-160 567.8 458 61.1
Phvul.008G230500 Phaseolus vulgaris HOM05D005294 ORTHO05D006720 8.7e-159 564.3 462 60.0
Hund05510 Selenicereus undatus HOM05D005294 ORTHO05D006720 5.6e-158 561.6 458 60.3
Aqoxy7G03926 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 3.6e-157 558.9 466 60.3
FvH4_1g06810 Fragaria vesca HOM05D005294 ORTHO05D006720 2.6e-155 552.7 459 60.1
TPR.G25848 Trifolium pratense HOM05D005294 ORTHO05D006720 3.4e-155 552.4 453 59.4
Migut.J00438 Erythranthe guttata HOM05D005294 ORTHO05D006720 4.4e-155 552.0 454 61.2
FAN26G2354 Fragaria x ananassa HOM05D005294 ORTHO05D006720 1.7e-154 550.1 459 60.3
Medtr5g080780 Medicago truncatula HOM05D005294 ORTHO05D006720 3.8e-154 548.9 453 59.2
PSO210G3043 Papaver somniferum HOM05D005294 ORTHO05D006720 3.8e-154 548.9 464 60.1
THA.LOC104811733 Tarenaya hassleriana HOM05D005294 ORTHO05D006720 3.8e-154 548.9 460 58.3
FAN23G1873 Fragaria x ananassa HOM05D005294 ORTHO05D006720 4.2e-153 545.4 459 59.7
BcaC01g06444 Brassica carinata HOM05D005294 ORTHO05D006720 5.4e-153 545.0 467 56.5
PSO210G1233 Papaver somniferum HOM05D005294 ORTHO05D006720 1.6e-152 543.5 464 59.7
A03p13220 Brassica napus HOM05D005294 ORTHO05D006720 2.7e-152 542.7 465 57.0
AL8G32570 Arabidopsis lyrata HOM05D005294 ORTHO05D006720 6.0e-152 541.6 456 57.0
ClCG11G001870 Citrullus lanatus HOM05D005294 ORTHO05D006720 7.9e-152 541.2 463 60.3
BraA03t10634Z Brassica rapa HOM05D005294 ORTHO05D006720 3.0e-151 539.3 465 56.6
Carub.0008s1722 Capsella rubella HOM05D005294 ORTHO05D006720 5.1e-151 538.5 463 56.2
CsaV3_2G001600 Cucumis sativus L. HOM05D005294 ORTHO05D006720 6.6e-151 538.1 463 60.3
BolC3t13987H Brassica oleracea HOM05D005294 ORTHO05D006720 8.7e-151 537.7 468 56.8
Thhalv10013465m.g Eutrema salsugineum HOM05D005294 ORTHO05D006720 1.1e-150 537.3 459 56.9
CARHR270490 Cardamine hirsuta HOM05D005294 ORTHO05D006720 2.5e-150 536.2 454 56.6
C03p15490 Brassica napus HOM05D005294 ORTHO05D006720 2.1e-149 533.1 468 56.4
BcaB01g04417 Brassica carinata HOM05D005294 ORTHO05D006720 2.8e-149 532.7 472 56.4
AT5G56740 Arabidopsis thaliana HOM05D005294 ORTHO05D006720 4.8e-149 531.9 456 56.8
BcaB08g36064 Brassica carinata HOM05D005294 ORTHO05D006720 8.1e-149 531.2 458 56.6
BraA10t43499Z Brassica rapa HOM05D005294 ORTHO05D006720 1.1e-148 530.8 454 56.6
Psat2g038680 Pisum sativum HOM05D005294 ORTHO05D006720 2.0e-147 526.6 454 57.0
A10p14080 Brassica napus HOM05D005294 ORTHO05D006720 3.4e-147 525.8 454 56.2
Ah.15g091540 Amaranthus hybridus HOM05D005294 ORTHO05D006720 4.5e-147 525.4 465 57.2
Sp6g18490 Schrenkiella parvula HOM05D005294 ORTHO05D006720 1.3e-146 523.9 469 56.1
VMungo0647G0234 Vigna mungo HOM05D005294 ORTHO05D006720 1.1e-145 520.8 462 58.0
AUR62008827 Chenopodium quinoa HOM05D005294 ORTHO05D006720 4.2e-145 518.8 465 57.4
EL10Ac7g17721 Beta vulgaris HOM05D005294 ORTHO05D006720 1.2e-144 517.3 423 60.5
Sed0020374 Sechium edule HOM05D005294 ORTHO05D006720 1.2e-144 517.3 462 58.4
AUR62025414 Chenopodium quinoa HOM05D005294 ORTHO05D006720 3.5e-144 515.8 465 56.8
SGA_v2.0_scaffold62G21576 Striga asiatica HOM05D005294 ORTHO05D006720 7.9e-144 514.6 497 53.3
FAN19G0312 Fragaria x ananassa HOM05D005294 ORTHO05D006720 1.1e-142 510.8 438 58.4
FAN26G0700 Fragaria x ananassa HOM05D005294 ORTHO05D006720 1.9e-142 510.0 460 56.7
MBI04_g06995_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 1.3e-135 487.3 456 55.3
unitig_26.g9161 Utricularia gibba HOM05D005294 ORTHO05D006720 1.1e-129 467.6 490 49.6
Aqoxy4G01946 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 4.2e-129 465.7 457 52.3
HPP92_009085 Vanilla planifolia HOM05D005294 ORTHO05D006720 1.2e-128 464.2 459 52.1
Ca_05904_v3 Cicer arietinum L. HOM05D005294 ORTHO05D006720 2.7e-128 463.0 421 54.2
Aa31LG3G12690 Aethionema arabicum HOM05D005294 ORTHO05D006720 1.0e-127 461.1 458 50.7
Os09g0347800 Oryza sativa ssp. japonica HOM05D005294 ORTHO05D006720 7.4e-126 454.9 468 48.3
Haze_25870 Corylus avellana HOM05D005294 ORTHO05D006720 3.7e-125 452.6 422 56.4
BcaC04g20057 Brassica carinata HOM05D005294 ORTHO05D006720 4.5e-123 445.7 449 50.1
Zm00001eb310550 Zea mays HOM05D005294 ORTHO05D006720 5.5e-121 438.7 454 50.4
Nn6g35397 Nelumbo nucifera HOM05D005294 ORTHO05D006720 6.7e-111 405.2 295 64.7
SGA_v2.0_scaffold10G05199 Striga asiatica HOM05D005294 ORTHO05D006720 1.7e-101 374.0 530 42.3
ATR0705G179 Amborella trichopoda HOM05D005294 ORTHO05D006720 8.2e-101 371.7 418 45.0
C09p48310 Brassica napus HOM05D005294 ORTHO05D006720 2.2e-93 347.1 369 48.0
BolC9t57681H Brassica oleracea HOM05D005294 ORTHO05D006720 2.2e-93 347.1 369 48.0
MELO3C004615.2 Cucumis melo HOM05D005294 ORTHO05D006720 1.2e-88 331.3 277 60.3
SEGI_34717 Sequoiadendron giganteum HOM05D005294 ORTHO05D006720 3.4e-86 323.2 490 38.4
CDE09G1011 Ceratophyllum demersum HOM05D005294 ORTHO05D006720 4.4e-86 322.8 445 40.4
SHI02790 Sapria himalayana HOM05D005294 ORTHO05D006720 3.8e-82 309.7 466 39.9
Oeu052126.1 Olea europaea HOM05D005294 ORTHO05D006720 4.9e-77 292.7 329 51.1
Actinidia25279 Actinidia chinensis HOM05D005294 ORTHO05D006720 2.4e-68 263.8 367 45.2
Mapoly0079s0005 Marchantia polymorpha HOM05D005294 ORTHO05D006720 2.1e-64 250.8 510 32.2
Pp3c15_19200 Physcomitrium patens HOM05D005294 ORTHO05D006720 1.5e-62 244.6 499 32.3
MBI14_g43979_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 1.6e-48 198.0 192 54.2
CBR_g45363 Chara braunii HOM05D005294 ORTHO05D006720 8.1e-48 195.7 391 32.7
Zm00001eb171070 Zea mays HOM05D005294 ORTHO05D006720 1.6e-43 181.4 162 54.9
Zm00001eb301910 Zea mays HOM05D005294 ORTHO05D006720 6.0e-43 179.5 162 54.3
RcHm_v2.0_Chr2g0093921 Rosa chinensis HOM05D005294 ORTHO05D006720 1.7e-37 161.4 117 65.8
Aa31LG3G12580 Aethionema arabicum HOM05D005294 ORTHO05D006720 3.9e-34 150.2 124 54.0
Aa31LG3G12620 Aethionema arabicum HOM05D005294 ORTHO05D006720 3.9e-34 150.2 124 54.0
CARHR271620 Cardamine hirsuta HOM05D005294 ORTHO05D006720 8.7e-34 149.1 105 63.8
Aa31sc2040G10 Aethionema arabicum HOM05D005294 ORTHO05D006720 5.6e-33 146.4 121 53.7
Aqoxy4G01950 Aquilegia oxysepala HOM05D002435 ORTHO05D002550 5.6e-33 146.4 217 39.6
Aa31LG3G12670 Aethionema arabicum HOM05D004235 ORTHO05D005157 2.1e-32 144.4 230 37.4
PRCOL_00004982 Prasinoderma coloniale HOM05D005294 ORTHO05D006720 4.8e-32 143.3 423 26.2
RcHm_v2.0_Chr2g0093931 Rosa chinensis HOM05D005294 ORTHO05D006720 2.4e-31 141.0 124 55.6
MCO15G657 Micromonas commoda HOM05D005294 ORTHO05D006720 3.2e-28 130.6 451 23.5
Cre03.g186500 Chlamydomonas reinhardtii HOM05D005294 ORTHO05D006720 6.7e-26 122.9 275 29.8
SMO281G0026 Selaginella moellendorffii HOM05D005294 ORTHO05D006720 9.3e-20 102.4 121 42.1
SGA_v2.0_scaffold194G40752 Striga asiatica HOM05D005294 ORTHO05D006720 6.3e-16 89.7 71 62.0
SMO244G0078 Selaginella moellendorffii HOM05D005294 ORTHO05D006720 1.4e-15 88.6 170 34.1
Zm00001eb382850 Zea mays HOM05D005294 ORTHO05D006720 9.0e-15 85.9 88 50.0
Zm00001eb383990 Zea mays HOM05D005294 ORTHO05D006720 1.5e-14 85.1 88 50.0
Aqoxy4G01951 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 3.2e-12 77.4 69 58.0
Cc06_g10970 Coffea canephora HOM05D005294 ORTHO05D038989 1.8e-10 71.6 40 82.5
GSVIVG01027373001 Vitis vinifera HOM05D005294 ORTHO05D006720 4.3e-09 67.0 39 76.9
GSVIVG01038419001 Vitis vinifera HOM05D005294 ORTHO05D008307 4.3e-09 67.0 38 78.9

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (5 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (4 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (2 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (3 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (3 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (3 genes)
Zea mays (5 genes)

Program Settings