Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004145 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 5.8e-47 190.7 104 100.0
CSS0035645 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 9.9e-39 163.3 108 79.6
CSS0025832 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 1.8e-27 125.9 110 66.4
Rhsim08G0203200 Rhododendron simsii HOM05D004918 ORTHO05D005706 4.1e-24 114.8 98 62.2
Actinidia25464 Actinidia chinensis HOM05D004918 ORTHO05D005706 2.0e-23 112.5 107 59.8
vmacro19072 Vaccinium macrocarpon HOM05D004918 ORTHO05D005706 1.9e-21 105.9 75 73.3
Dinv23270 Davidia involucrata HOM05D004918 ORTHO05D005706 7.4e-18 94.0 111 49.5
Manes.11G069000 Manihot esculenta HOM05D004918 ORTHO05D005706 9.7e-18 93.6 107 47.7
TAR625G0238 Trochodendron aralioides HOM05D004918 ORTHO05D005706 6.3e-17 90.9 77 58.4
DCAR_025541 Daucus carota HOM05D004918 ORTHO05D005706 4.1e-16 88.2 75 58.7
Nn2g12451 Nelumbo nucifera HOM05D004918 ORTHO05D005706 4.1e-16 88.2 78 55.1
Prupe.3G103300 Prunus persica HOM05D004918 ORTHO05D005706 4.1e-16 88.2 105 45.7
Hma1.2p1_1914F.1_g307380 Hydrangea macrophylla HOM05D004918 ORTHO05D005706 9.0e-16 87.0 77 57.1
Cpa.g.sc14.108 Carica papaya HOM05D004918 ORTHO05D005706 1.5e-15 86.3 79 53.2
Oeu004556.1 Olea europaea HOM05D004918 ORTHO05D005706 2.0e-15 85.9 77 53.2
Nn2g14031 Nelumbo nucifera HOM05D004918 ORTHO05D005706 2.6e-15 85.5 78 52.6
Atru.chr8.1159 Acer truncatum HOM05D004918 ORTHO05D005706 5.9e-15 84.3 77 54.5
Cc04_g05650 Coffea canephora HOM05D004918 ORTHO05D005706 7.7e-15 84.0 105 42.9
Ciclev10026430m.g Citrus clementina HOM05D004918 ORTHO05D005706 1.0e-14 83.6 77 54.5
Atru.chr1.2801 Acer truncatum HOM05D004918 ORTHO05D005706 1.7e-14 82.8 77 54.5
TPR.G15094 Trifolium pratense HOM05D004918 ORTHO05D005706 1.7e-14 82.8 77 54.5
GSVIVG01016107001 Vitis vinifera HOM05D004918 ORTHO05D005706 1.7e-14 82.8 107 42.1
PGR102G0155 Punica granatum HOM05D004918 ORTHO05D005706 2.9e-14 82.0 104 45.2
Nitab4.5_0004738g0120 Nicotiana tabacum HOM05D004918 ORTHO05D005706 5.0e-14 81.3 107 43.9
Medtr3g110270 Medicago truncatula HOM05D004918 ORTHO05D005706 8.5e-14 80.5 77 51.9
Nitab4.5_0002700g0180 Nicotiana tabacum HOM05D004918 ORTHO05D005706 1.4e-13 79.7 107 43.9
Oeu035883.1 Olea europaea HOM05D004918 ORTHO05D005706 1.4e-13 79.7 106 42.5
Thecc.06G046100 Theobroma cacao HOM05D004918 ORTHO05D005706 1.4e-13 79.7 77 49.4
CiPaw.02G163500 Carya illinoinensis HOM05D004918 ORTHO05D005706 2.5e-13 79.0 77 54.5
Lj6g0018730 Lotus japonicus HOM05D004918 ORTHO05D005706 2.5e-13 79.0 79 49.4
RcHm_v2.0_Chr2g0132361 Rosa chinensis HOM05D004918 ORTHO05D005706 2.5e-13 79.0 77 48.1
ClCG10G012810 Citrullus lanatus HOM05D004918 ORTHO05D005706 3.2e-13 78.6 107 43.0
Cc04_g05280 Coffea canephora HOM05D004918 ORTHO05D005706 4.2e-13 78.2 78 50.0
Lsat_1_v5_gn_4_85101 Lactuca sativa HOM05D004918 ORTHO05D005706 5.5e-13 77.8 77 51.9
Sc05g0005820 Simmondsia chinensis HOM05D004918 ORTHO05D005706 5.5e-13 77.8 76 51.3
CiPaw.01G073400 Carya illinoinensis HOM05D004918 ORTHO05D005706 7.2e-13 77.4 79 54.4
FAN09G4697 Fragaria x ananassa HOM05D004918 ORTHO05D005706 7.2e-13 77.4 79 48.1
MD12G1013200 Malus domestica HOM05D004918 ORTHO05D005706 7.2e-13 77.4 77 51.9
FvH4_6g28300 Fragaria vesca HOM05D004918 ORTHO05D005706 9.4e-13 77.0 107 39.3
VMungo1309G0542 Vigna mungo HOM05D004918 ORTHO05D005706 9.4e-13 77.0 77 49.4
Peaxi162Scf00314g01045 Petunia axillaris HOM05D004918 ORTHO05D005706 1.2e-12 76.6 108 42.6
Potri.003G184701 Populus trichocarpa HOM05D004918 ORTHO05D005706 1.6e-12 76.3 106 44.3
MBI19_g12142_MAGBIO Magnolia biondii HOM05D004918 ORTHO05D005706 2.7e-12 75.5 77 48.1
MD14G1138800 Malus domestica HOM05D004918 ORTHO05D005706 2.7e-12 75.5 79 49.4
AT1G16040 Arabidopsis thaliana HOM05D004918 ORTHO05D005706 3.6e-12 75.1 78 50.0
Cfa001859 Carpinus fangiana HOM05D004918 ORTHO05D005706 3.6e-12 75.1 79 51.9
MELO3C000966.2 Cucumis melo HOM05D004918 ORTHO05D005706 3.6e-12 75.1 108 41.7
Lalb_Chr13g0301111 Lupinus albus HOM05D004918 ORTHO05D005706 3.6e-12 75.1 107 39.3
Psat5g020280 Pisum sativum HOM05D004918 ORTHO05D005706 3.6e-12 75.1 79 46.8
Migut.I00673 Erythranthe guttata HOM05D004918 ORTHO05D005706 4.6e-12 74.7 77 51.9
Duzib192G0308 Durio zibethinus HOM05D004918 ORTHO05D005706 6.1e-12 74.3 77 46.8
MELO3C028676.2 Cucumis melo HOM05D004918 ORTHO05D005706 7.9e-12 73.9 107 41.1
HanXRQChr16g0499441 Helianthus annuus HOM05D004918 ORTHO05D005706 7.9e-12 73.9 75 49.3
AL1G28210 Arabidopsis lyrata HOM05D004918 ORTHO05D005706 1.0e-11 73.6 76 52.6
Sed0005872 Sechium edule HOM05D004918 ORTHO05D005706 1.0e-11 73.6 108 42.6
Solyc03g117650.4 Solanum lycopersicum HOM05D004918 ORTHO05D005706 1.0e-11 73.6 78 50.0
ECA232G4560 Erigeron canadensis HOM05D004918 ORTHO05D005706 1.4e-11 73.2 77 48.1
PSO063G6564 Papaver somniferum HOM05D004918 ORTHO05D005706 1.8e-11 72.8 76 46.1
FAN02G2144 Fragaria x ananassa HOM05D004918 ORTHO05D005706 3.0e-11 72.0 107 38.3
Sabra03G0135200 Salix brachista HOM05D004918 ORTHO05D005706 3.0e-11 72.0 77 51.9
CsaV3_3G032650 Cucumis sativus L. HOM05D004918 ORTHO05D005706 3.9e-11 71.6 77 49.4
Gorai.009G122300 Gossypium raimondii HOM05D004918 ORTHO05D005706 3.9e-11 71.6 77 42.9
HanXRQChr17g0561891 Helianthus annuus HOM05D004918 ORTHO05D005706 3.9e-11 71.6 77 48.1
Sopen03g036560 Solanum pennellii HOM05D004918 ORTHO05D005706 3.9e-11 71.6 107 40.2
TWI12G0375 Tripterygium wilfordii HOM05D004918 ORTHO05D005706 3.9e-11 71.6 77 48.1
MSTRG.22808 Avicennia marina HOM05D004918 ORTHO05D005706 5.1e-11 71.2 77 48.1
Ah.01g002790 Amaranthus hybridus HOM05D004918 ORTHO05D005706 6.7e-11 70.9 75 49.3
Glyma.09G000800 Glycine max HOM05D004918 ORTHO05D005706 8.8e-11 70.5 79 43.0
Aa31LG7G620 Aethionema arabicum HOM05D004918 ORTHO05D005706 1.1e-10 70.1 106 40.6
PSO017G2949 Papaver somniferum HOM05D004918 ORTHO05D005706 1.1e-10 70.1 76 46.1
PSO724G0600 Papaver somniferum HOM05D004918 ORTHO05D005706 1.1e-10 70.1 76 46.1
PSO729G0217 Papaver somniferum HOM05D004918 ORTHO05D005706 1.1e-10 70.1 76 46.1
Carub.0001s1585 Capsella rubella HOM05D004918 ORTHO05D005706 1.5e-10 69.7 76 51.3
Gohir.A05G117500 Gossypium hirsutum HOM05D004918 ORTHO05D005706 1.5e-10 69.7 77 41.6
PGSC0003DMG400014153 Solanum tuberosum HOM05D004918 ORTHO05D005706 1.5e-10 69.7 77 49.4
Gohir.D05G118400 Gossypium hirsutum HOM05D004918 ORTHO05D005706 2.0e-10 69.3 77 41.6
CDE02G0643 Ceratophyllum demersum HOM05D004918 ORTHO05D005706 2.5e-10 68.9 79 44.3
Phvul.009G194500 Phaseolus vulgaris HOM05D004918 ORTHO05D005706 2.5e-10 68.9 77 42.9
CARHR016550 Cardamine hirsuta HOM05D004918 ORTHO05D005706 4.3e-10 68.2 109 43.1
THA.LOC104808174 Tarenaya hassleriana HOM05D004918 ORTHO05D005706 4.3e-10 68.2 76 44.7
QL10p031453 Quercus lobata HOM05D004918 ORTHO05D005706 7.4e-10 67.4 61 55.7
arahy.Tifrunner.gnm1.ann1.T9YNFF Arachis hypogaea HOM05D004918 ORTHO05D005706 9.7e-10 67.0 77 45.5
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 1.3e-09 66.6 76 46.1
THA.LOC104812419 Tarenaya hassleriana HOM05D004918 ORTHO05D005706 1.3e-09 66.6 77 40.3
arahy.Tifrunner.gnm1.ann1.BN6NH6 Arachis hypogaea HOM05D004918 ORTHO05D005706 1.7e-09 66.2 77 44.2
arahy.Tifrunner.gnm1.ann1.U5XJV3 Arachis hypogaea HOM05D004918 ORTHO05D005706 1.7e-09 66.2 77 44.2
arahy.Tifrunner.gnm1.ann1.ZUNL57 Arachis hypogaea HOM05D004918 ORTHO05D005706 1.7e-09 66.2 77 44.2
Thhalv10008658m.g Eutrema salsugineum HOM05D004918 ORTHO05D005706 2.2e-09 65.9 106 39.6
Eucgr.F03982 Eucalyptus grandis HOM05D004918 ORTHO05D005706 2.8e-09 65.5 77 51.9
Sed0025979 Sechium edule HOM05D004918 ORTHO05D005706 2.8e-09 65.5 104 37.5
SalBow8G2778 Salvia bowleyana HOM05D004918 ORTHO05D005706 4.1e-08 61.6 74 45.9
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 4.1e-08 61.6 74 45.9
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 5.3e-08 61.2 76 47.4
CANSAT35G0550 Cannabis sativa HOM05D004918 ORTHO05D005706 5.3e-08 61.2 74 43.2
A08p31410 Brassica napus HOM05D004918 ORTHO05D005706 6.9e-08 60.8 76 47.4
BraA08t35064Z Brassica rapa HOM05D004918 ORTHO05D005706 6.9e-08 60.8 76 47.4
C08p17380 Brassica napus HOM05D004918 ORTHO05D005706 9.1e-08 60.5 76 47.4
BolC8t49364H Brassica oleracea HOM05D004918 ORTHO05D005706 9.1e-08 60.5 76 47.4
BcaB02g06654 Brassica carinata HOM05D004918 ORTHO05D005706 1.2e-07 60.1 76 46.1
BcaC07g38802 Brassica carinata HOM05D004918 ORTHO05D005706 1.2e-07 60.1 76 46.1
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 1.2e-07 60.1 77 45.5
BraA06t24376Z Brassica rapa HOM05D004918 ORTHO05D005706 1.2e-07 60.1 77 46.8
BcaB03g14507 Brassica carinata HOM05D004918 ORTHO05D005706 2.0e-07 59.3 76 46.1
A06p12070 Brassica napus HOM05D004918 ORTHO05D005706 2.0e-07 59.3 76 46.1
BcaB03g13048 Brassica carinata HOM05D004918 ORTHO05D005706 3.4e-07 58.5 106 37.7
BolC5t30156H Brassica oleracea HOM05D004918 ORTHO05D005706 3.4e-07 58.5 74 47.3
COL.COLO4_24896 Corchorus olitorius HOM05D004918 ORTHO05D005706 4.5e-07 58.2 75 40.0
BcaC05g25623 Brassica carinata HOM05D004918 ORTHO05D005706 7.7e-07 57.4 73 47.9
C05p14240 Brassica napus HOM05D004918 ORTHO05D005706 7.7e-07 57.4 73 47.9
SGA_v2.0_scaffold419G51286 Striga asiatica HOM05D004918 ORTHO05D005706 7.7e-07 57.4 73 42.5
FAN09G3573 Fragaria x ananassa HOM05D004918 ORTHO05D005706 1.3e-06 56.6 86 37.2
HanXRQChr10g0298641 Helianthus annuus HOM05D004918 ORTHO05D005706 1.7e-06 56.2 77 42.9
Os03g0129000 Oryza sativa ssp. japonica HOM05D004918 ORTHO05D005706 2.2e-06 55.8 79 39.2
Sp1g14360 Schrenkiella parvula HOM05D004918 ORTHO05D005706 2.2e-06 55.8 106 39.6
A09p61040 Brassica napus HOM05D004918 ORTHO05D005706 2.9e-06 55.5 79 41.8
BraA09t41477Z Brassica rapa HOM05D004918 ORTHO05D005706 2.9e-06 55.5 79 41.8
SEGI_14369 Sequoiadendron giganteum HOM05D004918 ORTHO05D005706 8.5e-06 53.9 73 35.6

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (5 genes)
Brassica napus (6 genes)
Brassica oleracea (3 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (0 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (3 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (4 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings