Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003139 Camellia sinensis var. sinensis HOM05D006136 ORTHO05D007244 0.0e+00 1201.8 634 100.0
CSS0019621 Camellia sinensis var. sinensis HOM05D006136 ORTHO05D007244 2.2e-242 842.4 459 97.4
Rhsim08G0117200 Rhododendron simsii HOM05D006136 ORTHO05D007244 1.0e-170 604.4 688 53.8
vmacro17832 Vaccinium macrocarpon HOM05D006136 ORTHO05D007244 1.8e-167 593.6 693 52.7
Dinv12632 Davidia involucrata HOM05D006136 ORTHO05D002774 4.0e-167 592.4 617 55.8
GSVIVG01038350001 Vitis vinifera HOM05D006136 ORTHO05D007244 6.5e-133 478.8 604 47.0
Lj9A583T57 Lonicera japonica HOM05D006136 ORTHO05D007244 1.6e-131 474.2 691 45.6
QL05p072260 Quercus lobata HOM05D000321 ORTHO05D007244 2.3e-130 470.3 610 47.4
QL11p005727 Quercus lobata HOM05D006136 ORTHO05D007244 2.0e-126 457.2 771 40.5
Cfa012873 Carpinus fangiana HOM05D006136 ORTHO05D007244 7.2e-124 448.7 630 44.1
TAR626G0660 Trochodendron aralioides HOM05D006136 ORTHO05D007244 7.2e-124 448.7 613 45.2
CiPaw.07G237600 Carya illinoinensis HOM05D006136 ORTHO05D007244 1.4e-122 444.5 621 45.6
Manes.02G224001 Manihot esculenta HOM05D006136 ORTHO05D007244 9.8e-113 411.8 607 41.5
Manes.11G052190 Manihot esculenta HOM05D006136 ORTHO05D007244 1.7e-112 411.0 608 41.4
Oeu000955.1 Olea europaea HOM05D006136 ORTHO05D007244 1.1e-111 408.3 614 42.8
Actinidia33603 Actinidia chinensis HOM05D006136 ORTHO05D007244 1.6e-107 394.4 377 60.5
TWI32G0914 Tripterygium wilfordii HOM05D006136 ORTHO05D007244 1.0e-106 391.7 657 38.5
Cpa.g.sc46.113 Carica papaya HOM05D006136 ORTHO05D007244 1.3e-104 384.8 753 35.2
MSTRG.26507 Avicennia marina HOM05D006136 ORTHO05D007244 4.9e-104 382.9 631 39.9
DCAR_020445 Daucus carota HOM05D006136 ORTHO05D002774 8.3e-104 382.1 692 38.9
Glyma.09G084800 Glycine max HOM05D006136 ORTHO05D007244 8.3e-104 382.1 624 40.1
Cc06_g23510 Coffea canephora HOM05D006136 ORTHO05D007244 1.1e-100 371.7 601 44.1
Prupe.1G000700 Prunus persica HOM05D006136 ORTHO05D007244 2.3e-98 364.0 639 40.2
Glyma.15G193100 Glycine max HOM05D006136 ORTHO05D007244 4.0e-98 363.2 623 39.3
Ciclev10007497m.g Citrus clementina HOM05D006136 ORTHO05D007244 4.4e-97 359.8 800 34.9
Peaxi162Scf00474g00018 Petunia axillaris HOM05D006136 ORTHO05D007244 3.7e-96 356.7 662 39.0
Duzib170G0744 Durio zibethinus HOM05D006136 ORTHO05D007244 1.4e-95 354.8 711 36.8
arahy.Tifrunner.gnm1.ann1.46MDAV Arachis hypogaea HOM05D006136 ORTHO05D007244 2.0e-94 350.9 626 37.4
Thecc.09G202200 Theobroma cacao HOM05D006136 ORTHO05D007244 4.6e-94 349.7 706 36.0
Haze_21244 Corylus avellana HOM05D006136 ORTHO05D007244 6.0e-94 349.4 580 41.6
EL10Ac2g03821 Beta vulgaris HOM05D006136 ORTHO05D007244 1.7e-93 347.8 663 35.7
Gohir.D08G026500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 3.0e-93 347.1 699 35.2
Gorai.004G023000 Gossypium raimondii HOM05D006136 ORTHO05D007244 3.0e-93 347.1 699 35.1
Atru.chr7.1014 Acer truncatum HOM05D006136 ORTHO05D007244 3.9e-93 346.7 793 33.0
Gohir.A08G016500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 3.9e-93 346.7 695 35.0
COL.COLO4_09001 Corchorus olitorius HOM05D006136 ORTHO05D007244 2.5e-92 344.0 707 34.2
Potri.018G151300 Populus trichocarpa HOM05D006136 ORTHO05D007244 2.5e-92 344.0 618 40.3
Sabra18G0127000 Salix brachista HOM05D006136 ORTHO05D007244 1.6e-91 341.3 619 40.1
Phvul.009G217200 Phaseolus vulgaris HOM05D006136 ORTHO05D007244 2.1e-91 340.9 633 38.2
Lsat_1_v5_gn_5_82020 Lactuca sativa HOM05D006136 ORTHO05D007244 8.1e-91 339.0 594 39.9
Lalb_Chr08g0233201 Lupinus albus HOM05D006136 ORTHO05D007244 4.0e-90 336.7 650 36.9
Sc06g0001020 Simmondsia chinensis HOM05D006136 ORTHO05D007244 1.5e-89 334.7 731 34.3
Lj6g0010551 Lotus japonicus HOM05D006136 ORTHO05D007244 1.3e-88 331.6 676 35.7
Nitab4.5_0000807g0150 Nicotiana tabacum HOM05D006136 ORTHO05D007244 4.9e-88 329.7 742 35.8
Eucgr.C02149 Eucalyptus grandis HOM05D006136 ORTHO05D007244 1.1e-87 328.6 689 36.6
VMungo1309G0146 Vigna mungo HOM05D006136 ORTHO05D007244 7.8e-86 322.4 639 36.9
MELO3C010014.2 Cucumis melo HOM05D006136 ORTHO05D007244 1.0e-85 322.0 674 36.5
CsaV3_1G044190 Cucumis sativus L. HOM05D006136 ORTHO05D007244 9.5e-84 315.5 681 35.1
Aqoxy7G02564 Aquilegia oxysepala HOM05D006136 ORTHO05D007244 1.2e-83 315.1 788 32.6
RcHm_v2.0_Chr4g0384741 Rosa chinensis HOM05D006136 ORTHO05D007244 4.7e-83 313.2 692 35.3
SalBow5G5580 Salvia bowleyana HOM05D006136 ORTHO05D007244 1.8e-82 311.2 662 34.4
ClCG03G011600 Citrullus lanatus HOM05D006136 ORTHO05D007244 2.3e-82 310.8 676 35.8
PGSC0003DMG400013541 Solanum tuberosum HOM05D006136 ORTHO05D007244 2.3e-82 310.8 719 33.5
ECA234G2139 Erigeron canadensis HOM05D006136 ORTHO05D007244 5.8e-81 306.2 705 34.3
HanXRQChr10g0309281 Helianthus annuus HOM05D006136 ORTHO05D007244 5.8e-81 306.2 690 34.5
Psat1g019160 Pisum sativum HOM05D006136 ORTHO05D007244 5.8e-81 306.2 692 33.7
Sopen07g022390 Solanum pennellii HOM05D006136 ORTHO05D007244 2.2e-80 304.3 792 31.1
Nn5g26953 Nelumbo nucifera HOM05D006136 ORTHO05D007244 4.9e-80 303.1 449 43.2
Migut.L01610 Erythranthe guttata HOM05D006136 ORTHO05D007244 4.1e-79 300.1 693 33.0
MD04G1000700 Malus domestica HOM05D006136 ORTHO05D007244 5.4e-79 299.7 741 32.9
FAN17G2087 Fragaria x ananassa HOM05D006136 ORTHO05D007244 2.1e-78 297.7 683 34.6
PSO478G4925 Papaver somniferum HOM05D006136 ORTHO05D007244 3.5e-78 297.0 723 32.2
Medtr2g048340 Medicago truncatula HOM05D006136 ORTHO05D007244 7.8e-78 295.8 671 33.4
Ca_02520_v3 Cicer arietinum L. HOM05D006136 ORTHO05D007244 1.7e-77 294.7 609 36.3
PSO782G1690 Papaver somniferum HOM05D006136 ORTHO05D007244 3.9e-77 293.5 723 32.1
AUR62009114 Chenopodium quinoa HOM05D000163 ORTHO05D007244 1.5e-76 291.6 732 33.5
PGR044G0474 Punica granatum HOM05D006136 ORTHO05D007244 4.7e-75 286.6 673 35.1
Nitab4.5_0000170g0140 Nicotiana tabacum HOM05D006136 ORTHO05D007244 1.1e-74 285.4 732 33.1
MBI16_g40727_MAGBIO Magnolia biondii HOM05D006136 ORTHO05D007244 1.4e-74 285.0 635 34.8
AUR62039148 Chenopodium quinoa HOM05D006136 ORTHO05D007244 2.0e-73 281.2 733 33.0
ATR0626G098 Amborella trichopoda HOM05D006136 ORTHO05D007244 3.4e-73 280.4 612 33.8
Sp6g19810 Schrenkiella parvula HOM05D006136 ORTHO05D007244 2.9e-72 277.3 697 33.7
SGA_v2.0_scaffold21G09584 Striga asiatica HOM05D006136 ORTHO05D007244 2.9e-72 277.3 618 34.6
FAN12G0507 Fragaria x ananassa HOM05D006136 ORTHO05D007244 2.4e-71 274.2 694 33.0
Thhalv10012942m.g Eutrema salsugineum HOM05D006136 ORTHO05D007244 8.7e-69 265.8 682 31.4
CARHR271930 Cardamine hirsuta HOM05D006136 ORTHO05D007244 1.5e-68 265.0 773 30.0
AL8G34230 Arabidopsis lyrata HOM05D006136 ORTHO05D007244 1.6e-67 261.5 388 41.0
AT5G58130 Arabidopsis thaliana HOM05D006136 ORTHO05D007244 3.4e-65 253.8 388 39.9
Zm00001eb209220 Zea mays HOM05D006136 ORTHO05D007244 4.4e-65 253.4 620 34.4
FAN12G3399 Fragaria x ananassa HOM05D006136 ORTHO05D007244 1.7e-64 251.5 472 38.1
HPP92_017041 Vanilla planifolia HOM05D006136 ORTHO05D007244 2.4e-63 247.7 528 36.0
CANSAT01G2594 Cannabis sativa HOM05D006136 ORTHO05D007244 1.3e-61 241.9 666 30.9
THA.LOC104803376 Tarenaya hassleriana HOM05D006136 ORTHO05D007244 1.3e-61 241.9 612 32.5
Aa31LG3G13960 Aethionema arabicum HOM05D006136 ORTHO05D007244 1.9e-60 238.0 433 40.0
FAN22G1396 Fragaria x ananassa HOM05D006136 ORTHO05D007244 1.9e-60 238.0 604 33.1
Carub.0008s1868 Capsella rubella HOM05D006136 ORTHO05D007244 3.3e-60 237.3 389 39.1
unitig_699.g19255 Utricularia gibba HOM05D006136 ORTHO05D007244 4.3e-60 236.9 417 36.5
C09p50030 Brassica napus HOM05D006136 ORTHO05D007244 9.6e-60 235.7 737 29.9
Os02g0138200 Oryza sativa ssp. japonica HOM05D006136 ORTHO05D007244 9.6e-60 235.7 600 32.7
BolC9t57856H Brassica oleracea HOM05D006136 ORTHO05D007244 2.1e-59 234.6 737 29.9
A10p16060 Brassica napus HOM05D006136 ORTHO05D007244 4.8e-59 233.4 399 37.1
BcaC04g19905 Brassica carinata HOM05D006136 ORTHO05D007244 8.1e-59 232.6 737 29.0
BraA10t43623Z Brassica rapa HOM05D006136 ORTHO05D007244 2.4e-58 231.1 399 36.8
BcaB08g36165 Brassica carinata HOM05D006136 ORTHO05D007244 2.0e-57 228.0 757 28.8
RcHm_v2.0_Chr5g0003141 Rosa chinensis HOM05D006136 ORTHO05D007244 7.6e-57 226.1 632 32.6
TPR.G18712 Trifolium pratense HOM05D006136 ORTHO05D007244 3.9e-53 213.8 631 29.3
GSVIVG01038333001 Vitis vinifera HOM05D006136 ORTHO05D007244 1.1e-50 205.7 173 57.2
SEGI_05126 Sequoiadendron giganteum HOM05D006136 ORTHO05D007244 1.7e-48 198.4 227 48.9
Solyc07g042740.3 Solanum lycopersicum HOM05D006136 ORTHO05D007244 5.5e-47 193.4 228 45.2
PGR044G0304 Punica granatum HOM05D006136 ORTHO05D007244 6.7e-45 186.4 612 33.5
CDE05G3219 Ceratophyllum demersum HOM05D006136 ORTHO05D007244 1.6e-43 181.8 322 37.0
Lj1g0026291 Lotus japonicus HOM05D006136 ORTHO05D007244 1.2e-38 165.6 313 38.0
arahy.Tifrunner.gnm1.ann1.27MYTD Arachis hypogaea HOM05D006136 ORTHO05D007244 3.0e-29 134.4 136 51.5
Mapoly0169s0023 Marchantia polymorpha HOM05D006136 ORTHO05D007244 3.0e-29 134.4 194 42.8
arahy.Tifrunner.gnm1.ann1.QC7K1D Arachis hypogaea HOM05D006136 ORTHO05D007244 3.3e-28 131.0 92 67.4
arahy.Tifrunner.gnm1.ann1.Q88MA9 Arachis hypogaea HOM05D006136 ORTHO05D007244 2.8e-27 127.9 92 64.1
SMO367G1245 Selaginella moellendorffii HOM05D006136 ORTHO05D007244 3.7e-27 127.5 676 25.3
Sed0020259 Sechium edule HOM05D006136 ORTHO05D007244 1.2e-25 122.5 483 28.8
AagrBONN_evm.TU.Sc2ySwM_228.2439 Anthoceros agrestis HOM05D006136 ORTHO05D007244 3.2e-23 114.4 170 38.2
FvH4_4g00130 Fragaria vesca HOM05D006136 ORTHO05D007244 7.9e-22 109.8 492 28.5
arahy.Tifrunner.gnm1.ann1.SWI1TY Arachis hypogaea HOM05D006136 ORTHO05D007244 3.9e-21 107.5 293 29.0
Glyma.07G231200 Glycine max HOM05D003235 ORTHO05D007244 3.3e-20 104.4 79 58.2
Pp3c1_8430 Physcomitrium patens HOM05D006136 ORTHO05D007244 4.4e-20 104.0 142 43.7
Hund03317 Selenicereus undatus HOM05D006136 ORTHO05D007244 3.7e-19 100.9 497 26.4
Hma1.2p1_2895F.1_g329976 Hydrangea macrophylla HOM05D006136 ORTHO05D007244 1.3e-16 92.4 58 75.9
Nitab4.5_0002310g0140 Nicotiana tabacum HOM05D006136 ORTHO05D007244 5.5e-15 87.0 200 35.5
Solyc07g042700.4 Solanum lycopersicum HOM05D006136 ORTHO05D007244 1.0e-13 82.8 164 37.8
TPR.G20669 Trifolium pratense HOM05D006136 ORTHO05D007244 2.2e-11 75.1 68 61.8
CBR_g39420 Chara braunii HOM05D006136 ORTHO05D007244 6.3e-11 73.6 149 35.6
BcaC03g14120 Brassica carinata HOM05D009052 ORTHO05D011796 7.0e-10 70.1 73 53.4
C02p13590 Brassica napus HOM05D006136 ORTHO05D007244 2.0e-09 68.6 73 53.4
BolC2t07471H Brassica oleracea HOM05D006136 ORTHO05D007244 2.0e-09 68.6 73 53.4
MBI16_g40728_MAGBIO Magnolia biondii HOM05D006136 ORTHO05D007244 8.5e-08 63.2 73 45.2
Lsat_1_v5_gn_5_81880 Lactuca sativa HOM05D006136 ORTHO05D007244 1.5e-07 62.4 191 29.8
VMungo1309G2339 Vigna mungo HOM05D006136 ORTHO05D007244 9.4e-07 59.7 154 30.5
Cre14.g633400 Chlamydomonas reinhardtii HOM05D006136 ORTHO05D007244 2.1e-06 58.5 113 31.9
TPR.G24042 Trifolium pratense HOM05D006136 ORTHO05D007244 2.1e-06 58.5 70 47.1

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (5 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (2 genes)
Malus domestica (1 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (3 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (2 genes)
Zea mays (1 genes)

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