Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002796 Camellia sinensis var. sinensis HOM05D005436 ORTHO05D006215 2.3e-167 592.4 360 100.0
Actinidia27803 Actinidia chinensis HOM05D005436 ORTHO05D006215 4.4e-110 402.1 360 75.8
TAR629G0589 Trochodendron aralioides HOM05D005436 ORTHO05D006215 1.2e-107 394.0 355 76.1
Lj3A1057T77 Lonicera japonica HOM05D005436 ORTHO05D006215 2.0e-107 393.3 359 74.7
TAR629G3419 Trochodendron aralioides HOM05D005436 ORTHO05D006215 5.9e-107 391.7 355 75.5
Manes.13G025400 Manihot esculenta HOM05D005436 ORTHO05D006215 8.6e-106 387.9 355 73.8
Rhsim12G0040900 Rhododendron simsii HOM05D005436 ORTHO05D006215 1.1e-105 387.5 365 73.2
HanXRQChr08g0208111 Helianthus annuus HOM05D005436 ORTHO05D006215 5.6e-105 385.2 364 72.5
Lsat_1_v5_gn_8_150780 Lactuca sativa HOM05D005436 ORTHO05D006215 5.2e-103 378.6 362 72.7
Thecc.02G258400 Theobroma cacao HOM05D005436 ORTHO05D006215 5.8e-102 375.2 359 73.8
Potri.010G045300 Populus trichocarpa HOM05D005436 ORTHO05D006215 6.4e-101 371.7 359 71.6
Duzib251G0682 Durio zibethinus HOM05D005436 ORTHO05D006215 1.3e-98 364.0 359 70.2
Atru.chr11.2113 Acer truncatum HOM05D005436 ORTHO05D006215 2.3e-98 363.2 358 70.7
Atru.chr11.2128 Acer truncatum HOM05D005436 ORTHO05D006215 2.3e-98 363.2 358 70.7
PGR119G1276 Punica granatum HOM05D005436 ORTHO05D006215 6.6e-98 361.7 295 83.1
COL.COLO4_24251 Corchorus olitorius HOM05D005436 ORTHO05D006215 8.6e-98 361.3 359 71.3
Gorai.009G335800 Gossypium raimondii HOM05D005436 ORTHO05D006215 8.6e-98 361.3 359 72.1
MSTRG.2420 Avicennia marina HOM05D005436 ORTHO05D006215 1.1e-97 360.9 361 70.1
Gohir.A05G312700 Gossypium hirsutum HOM05D005436 ORTHO05D006215 1.5e-97 360.5 359 71.6
Oeu001711.1 Olea europaea HOM05D005436 ORTHO05D006215 1.9e-97 360.1 359 71.3
Sabra10G0023000 Salix brachista HOM05D005436 ORTHO05D006215 3.3e-97 359.4 357 69.7
Migut.E00197 Erythranthe guttata HOM05D005436 ORTHO05D006215 5.6e-97 358.6 359 69.4
AUR62005449 Chenopodium quinoa HOM05D005436 ORTHO05D006215 2.8e-96 356.3 361 71.2
EL10Ac6g13796 Beta vulgaris HOM05D005436 ORTHO05D006215 3.6e-96 355.9 359 68.8
QL03p058434 Quercus lobata HOM05D005436 ORTHO05D006215 1.1e-95 354.4 358 70.1
Ciclev10032010m.g Citrus clementina HOM05D005436 ORTHO05D006215 2.3e-95 353.2 355 70.7
CiPaw.05G183100 Carya illinoinensis HOM05D005436 ORTHO05D006215 7.5e-94 348.2 361 69.5
Cfa009203 Carpinus fangiana HOM05D005436 ORTHO05D006215 2.9e-93 346.3 357 69.7
CsaV3_2G024910 Cucumis sativus L. HOM05D005436 ORTHO05D006215 6.4e-93 345.1 371 68.5
PSO832G1925 Papaver somniferum HOM05D005436 ORTHO05D006215 6.4e-93 345.1 366 65.3
Nitab4.5_0004301g0010 Nicotiana tabacum HOM05D005436 ORTHO05D006215 1.4e-92 344.0 363 68.9
MSTRG.7922 Avicennia marina HOM05D005436 ORTHO05D006215 1.9e-92 343.6 355 67.9
PGSC0003DMG400018621 Solanum tuberosum HOM05D005436 ORTHO05D006215 3.2e-92 342.8 358 69.3
Gorai.002G187200 Gossypium raimondii HOM05D005436 ORTHO05D006215 4.1e-92 342.4 359 70.2
Eucgr.H02509 Eucalyptus grandis HOM05D005436 ORTHO05D006215 7.1e-92 341.7 383 64.0
Gohir.A01G159300 Gossypium hirsutum HOM05D005436 ORTHO05D006215 9.2e-92 341.3 299 78.6
Hund25385 Selenicereus undatus HOM05D005436 ORTHO05D006215 9.2e-92 341.3 362 68.5
Gohir.D01G151000 Gossypium hirsutum HOM05D005436 ORTHO05D006215 1.6e-91 340.5 359 69.9
Sopen05g008220 Solanum pennellii HOM05D005436 ORTHO05D006215 2.7e-91 339.7 358 67.6
Ah.03g133110 Amaranthus hybridus HOM05D005436 ORTHO05D006215 4.6e-91 339.0 364 67.0
Dinv15239 Davidia involucrata HOM05D005436 ORTHO05D006215 6.0e-91 338.6 242 71.9
Sc14g0008720 Simmondsia chinensis HOM05D005436 ORTHO05D006215 3.0e-90 336.3 359 66.9
Manes.12G023900 Manihot esculenta HOM05D005436 ORTHO05D006215 5.1e-90 335.5 306 75.8
SGA_v2.0_scaffold87G27081 Striga asiatica HOM05D005436 ORTHO05D006215 5.1e-90 335.5 355 66.5
ClCG08G017720 Citrullus lanatus HOM05D005436 ORTHO05D006215 6.6e-90 335.1 365 66.8
Nitab4.5_0002631g0010 Nicotiana tabacum HOM05D005436 ORTHO05D006215 1.1e-89 334.3 293 77.5
Carub.0002s1732 Capsella rubella HOM05D005436 ORTHO05D006215 1.9e-89 333.6 359 66.3
Nitab4.5_0000069g0320 Nicotiana tabacum HOM05D005436 ORTHO05D006215 1.9e-89 333.6 311 74.9
THA.LOC104822162 Tarenaya hassleriana HOM05D005436 ORTHO05D006215 1.9e-89 333.6 362 67.1
CANSAT01G1386 Cannabis sativa HOM05D005436 ORTHO05D006215 3.3e-89 332.8 355 61.4
TWI36G0572 Tripterygium wilfordii HOM05D005436 ORTHO05D006215 3.3e-89 332.8 361 68.1
Actinidia08140 Actinidia chinensis HOM05D005436 ORTHO05D006215 7.3e-89 331.6 314 75.2
MELO3C010688.2 Cucumis melo HOM05D005436 ORTHO05D006215 4.7e-88 328.9 395 49.9
Aqoxy5G03784 Aquilegia oxysepala HOM05D005436 ORTHO05D006215 6.2e-88 328.6 353 66.3
Solyc05g013410.3 Solanum lycopersicum HOM05D005436 ORTHO05D006215 6.8e-87 325.1 323 71.5
PGSC0003DMG400016374 Solanum tuberosum HOM05D005436 ORTHO05D006215 6.8e-87 325.1 364 66.5
AL2G30010 Arabidopsis lyrata HOM05D005436 ORTHO05D006215 8.9e-87 324.7 359 65.5
Nitab4.5_0000740g0060 Nicotiana tabacum HOM05D005436 ORTHO05D006215 1.2e-86 324.3 358 65.1
Sp5g25750 Schrenkiella parvula HOM05D005436 ORTHO05D006215 1.2e-86 324.3 359 65.2
Prupe.1G243200 Prunus persica HOM05D005436 ORTHO05D006215 1.5e-86 323.9 357 64.4
Sopen01g003470 Solanum pennellii HOM05D005436 ORTHO05D006215 1.5e-86 323.9 364 65.1
unitig_744.g24291 Utricularia gibba HOM05D005436 ORTHO05D006215 4.4e-86 322.4 353 64.3
ECA233G4095 Erigeron canadensis HOM05D005436 ORTHO05D006215 5.8e-86 322.0 294 73.8
SHI17740 Sapria himalayana HOM05D005436 ORTHO05D006215 1.3e-85 320.9 292 76.4
Migut.L01484 Erythranthe guttata HOM05D005436 ORTHO05D006215 2.2e-85 320.1 290 76.2
CDE07G1825 Ceratophyllum demersum HOM05D005436 ORTHO05D006215 4.9e-85 318.9 299 72.6
Aa31LG4G10370 Aethionema arabicum HOM05D005436 ORTHO05D006215 1.4e-84 317.4 361 65.7
CARHR063810 Cardamine hirsuta HOM05D005436 ORTHO05D006215 1.9e-84 317.0 362 65.2
MD13G1102600 Malus domestica HOM05D005436 ORTHO05D006215 4.1e-84 315.8 355 65.6
BraA07t31265Z Brassica rapa HOM05D005436 ORTHO05D006215 5.4e-84 315.5 360 64.7
Solyc01g007930.4 Solanum lycopersicum HOM05D005436 ORTHO05D006215 7.1e-84 315.1 364 64.0
A07p37030 Brassica napus HOM05D005436 ORTHO05D006215 1.2e-83 314.3 360 63.6
C06p44590 Brassica napus HOM05D005436 ORTHO05D006215 1.6e-83 313.9 285 76.1
BolC6t39523H Brassica oleracea HOM05D005436 ORTHO05D006215 3.5e-83 312.8 285 76.1
Lalb_Chr16g0381971 Lupinus albus HOM05D005436 ORTHO05D006215 3.5e-83 312.8 355 64.5
Glyma.01G026500 Glycine max HOM05D005436 ORTHO05D006215 6.0e-83 312.0 308 68.5
Cpa.g.sc33.9 Carica papaya HOM05D005436 ORTHO05D006215 1.3e-82 310.8 339 66.1
DCAR_024434 Daucus carota HOM05D005436 ORTHO05D006215 3.9e-82 309.3 357 61.9
VMungo1215G1754 Vigna mungo HOM05D005436 ORTHO05D006215 8.6e-82 308.1 312 67.0
Thhalv10018848m.g Eutrema salsugineum HOM05D005436 ORTHO05D006215 3.6e-80 302.8 346 65.6
AT1G70590 Arabidopsis thaliana HOM05D005436 ORTHO05D006215 6.2e-80 302.0 365 61.4
Lj2g0004338 Lotus japonicus HOM05D005436 ORTHO05D006215 6.2e-80 302.0 356 61.8
Glyma.02G038300 Glycine max HOM05D005436 ORTHO05D006215 9.9e-78 294.7 356 56.2
CAN.G282.54 Capsicum annuum HOM05D005436 ORTHO05D006215 2.9e-77 293.1 305 70.2
TAR371G0549 Trochodendron aralioides HOM05D005436 ORTHO05D006215 3.2e-76 289.7 250 62.8
ATR0686G177 Amborella trichopoda HOM05D005436 ORTHO05D006215 4.6e-75 285.8 309 68.0
Medtr5g033210 Medicago truncatula HOM05D005436 ORTHO05D006215 7.8e-75 285.0 354 59.9
arahy.Tifrunner.gnm1.ann1.9TCE4B Arachis hypogaea HOM05D005436 ORTHO05D006215 1.0e-74 284.6 359 61.0
vmacro01128 Vaccinium macrocarpon HOM05D005436 ORTHO05D006215 1.3e-74 284.3 307 70.7
Sed0020021 Sechium edule HOM05D005436 ORTHO05D006215 1.9e-73 280.4 294 62.2
Nn4g22635 Nelumbo nucifera HOM05D005436 ORTHO05D006215 5.6e-73 278.9 191 73.3
MBI10_g03014_MAGBIO Magnolia biondii HOM05D005436 ORTHO05D006215 2.8e-72 276.6 358 61.7
Gohir.D05G314200 Gossypium hirsutum HOM05D005436 ORTHO05D006215 3.6e-72 276.2 239 62.3
Ca_04576_v3 Cicer arietinum L. HOM05D005436 ORTHO05D006215 6.2e-72 275.4 354 60.5
Potri.008G187200 Populus trichocarpa HOM05D005436 ORTHO05D006215 8.1e-72 275.0 185 72.4
Lalb_Chr09g0326141 Lupinus albus HOM05D005436 ORTHO05D006215 1.2e-70 271.2 353 58.4
RcHm_v2.0_Chr4g0432791 Rosa chinensis HOM05D005436 ORTHO05D006215 1.5e-70 270.8 357 59.4
Phvul.002G150600 Phaseolus vulgaris HOM05D005436 ORTHO05D006215 9.9e-70 268.1 312 60.6
AUR62024292 Chenopodium quinoa HOM05D005436 ORTHO05D006215 1.9e-68 263.8 242 79.8
SEGI_41390 Sequoiadendron giganteum HOM05D005436 ORTHO05D006215 5.4e-68 262.3 296 65.2
HPP92_021381 Vanilla planifolia HOM05D005436 ORTHO05D006215 1.0e-66 258.1 368 57.1
FvH4_4g25470 Fragaria vesca HOM05D005436 ORTHO05D006215 6.6e-66 255.4 357 56.9
arahy.Tifrunner.gnm1.ann1.RINP63 Arachis hypogaea HOM05D005436 ORTHO05D006215 5.6e-65 252.3 435 50.3
Haze_12240 Corylus avellana HOM05D005436 ORTHO05D006215 5.6e-65 252.3 241 58.1
FAN17G0814 Fragaria x ananassa HOM05D005436 ORTHO05D006215 7.3e-65 251.9 357 56.3
unitig_21.g20870 Utricularia gibba HOM05D005436 ORTHO05D006215 2.8e-64 250.0 316 47.2
FAN07G0404 Fragaria x ananassa HOM05D005436 ORTHO05D006215 5.3e-63 245.7 357 54.6
SalBow2G2235 Salvia bowleyana HOM05D005436 ORTHO05D006215 2.6e-62 243.4 292 64.7
BcaB03g14825 Brassica carinata HOM05D005436 ORTHO05D006215 5.8e-62 242.3 165 70.9
FAN12G3651 Fragaria x ananassa HOM05D005436 ORTHO05D006215 7.6e-62 241.9 384 38.8
FAN22G0693 Fragaria x ananassa HOM05D005436 ORTHO05D006215 2.1e-56 223.8 357 53.8
GSVIVG01004082001 Vitis vinifera HOM05D005436 ORTHO05D006215 1.3e-53 214.5 194 87.6
Pp3c16_22820 Physcomitrium patens HOM05D005436 ORTHO05D006215 1.1e-52 211.5 297 59.9
CAN.G227.3 Capsicum annuum HOM05D005436 ORTHO05D006215 9.6e-49 198.4 160 64.4
Peaxi162Scf00128g00005 Petunia axillaris HOM05D005436 ORTHO05D006215 1.5e-46 191.0 241 68.5
Cc11_g15600 Coffea canephora HOM05D005436 ORTHO05D006215 3.4e-46 189.9 194 80.9
SMO334G0079 Selaginella moellendorffii HOM05D005436 ORTHO05D006215 5.9e-46 189.1 262 61.5
Psat2g092560 Pisum sativum HOM05D005436 ORTHO05D006215 1.7e-45 187.6 196 52.6
CDE04G1163 Ceratophyllum demersum HOM05D005436 ORTHO05D006215 2.1e-43 180.6 214 43.9
RcHm_v2.0_Chr7g0240871 Rosa chinensis HOM05D005436 ORTHO05D006215 4.6e-43 179.5 183 53.6
Os04g0476000 Oryza sativa ssp. japonica HOM05D005436 ORTHO05D006215 2.6e-38 163.7 286 53.1
AagrBONN_evm.TU.Sc2ySwM_344.5149 Anthoceros agrestis HOM05D005436 ORTHO05D006215 5.5e-36 156.0 278 52.9
CBR_g41529 Chara braunii HOM05D005436 ORTHO05D006215 2.5e-33 147.1 129 52.7
FAN18G0478 Fragaria x ananassa HOM05D005436 ORTHO05D006215 1.5e-30 137.9 194 41.8
CAN.G227.4 Capsicum annuum HOM05D005436 ORTHO05D006215 2.0e-30 137.5 160 81.9
FAN08G0615 Fragaria x ananassa HOM05D005436 ORTHO05D006215 6.5e-29 132.5 178 43.3
FAN13G0137 Fragaria x ananassa HOM05D005436 ORTHO05D006215 6.5e-29 132.5 186 41.9
TAR371G0328 Trochodendron aralioides HOM05D005436 ORTHO05D006215 1.4e-28 131.3 142 91.5
TPR.G38771 Trifolium pratense HOM05D005436 ORTHO05D006215 5.9e-22 109.4 84 59.5
TAR633G1814 Trochodendron aralioides HOM05D005436 ORTHO05D006215 2.2e-21 107.5 128 89.1
FvH4_5g38910 Fragaria vesca HOM05D005436 ORTHO05D006215 2.5e-20 104.0 114 46.5
TAR314G0004 Trochodendron aralioides HOM05D005436 ORTHO05D006215 9.4e-20 102.1 89 60.7
TAR371G0429 Trochodendron aralioides HOM05D044080 ORTHO05D006215 1.4e-18 98.2 134 67.2
TPR.G38818 Trifolium pratense HOM05D005436 ORTHO05D006215 2.6e-17 94.0 62 71.0
TAR633G0170 Trochodendron aralioides HOM05D005436 ORTHO05D006215 7.5e-17 92.4 135 83.0
RcHm_v2.0_Chr4g0436601 Rosa chinensis HOM05D005436 ORTHO05D006215 9.7e-17 92.0 84 54.8
TAR314G0002 Trochodendron aralioides HOM05D005436 ORTHO05D006215 5.2e-10 69.7 127 78.7
AL3G40260 Arabidopsis lyrata HOM05D005436 ORTHO05D006215 2.0e-09 67.8 56 60.7
Hma1.2p1_0870F.1_g230930 Hydrangea macrophylla HOM05D005436 ORTHO05D006215 2.6e-09 67.4 48 79.2
Zm00001eb344380 Zea mays HOM05D005436 ORTHO05D006215 1.1e-07 62.0 58 51.7
Dinv15974 Davidia involucrata HOM05D046031 ORTHO05D006215 1.6e-06 58.2 37 83.8
RcHm_v2.0_Chr2g0120671 Rosa chinensis HOM05D009478 ORTHO05D010213 3.5e-06 57.0 41 58.5
RcHm_v2.0_Chr1g0318701 Rosa chinensis HOM05D005436 ORTHO05D006215 4.5e-06 56.6 56 53.6
Psat0s3979g0040 Pisum sativum HOM05D003776 ORTHO05D004459 5.9e-06 56.2 37 70.3

Acer truncatum (2 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (3 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (7 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (5 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (9 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings