Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001998 Camellia sinensis var. sinensis HOM05D004924 ORTHO05D005896 1.1e-86 323.2 146 100.0
Actinidia28798 Actinidia chinensis HOM05D004924 ORTHO05D005896 8.4e-68 260.4 128 88.3
Potri.017G131900 Populus trichocarpa HOM05D004924 ORTHO05D005896 2.4e-67 258.8 128 87.5
Hma1.2p1_0158F.1_g070040 Hydrangea macrophylla HOM05D004924 ORTHO05D005896 9.3e-67 256.9 128 85.2
vmacro18525 Vaccinium macrocarpon HOM05D004924 ORTHO05D005896 1.7e-65 252.7 132 84.1
Cfa007789 Carpinus fangiana HOM05D004924 ORTHO05D005896 3.9e-65 251.5 128 85.9
Thecc.04G063500 Theobroma cacao HOM05D004924 ORTHO05D005896 1.5e-64 249.6 128 81.2
Cfa007788 Carpinus fangiana HOM05D004924 ORTHO05D005896 1.9e-64 249.2 129 84.5
Cc07_g13240 Coffea canephora HOM05D004924 ORTHO05D005896 2.5e-64 248.8 128 82.8
Cfa007787 Carpinus fangiana HOM05D004924 ORTHO05D005896 3.3e-64 248.4 129 83.7
Cpa.g.sc116.75 Carica papaya HOM05D004924 ORTHO05D005896 4.3e-64 248.1 133 78.2
Manes.01G120100 Manihot esculenta HOM05D004924 ORTHO05D005896 4.3e-64 248.1 128 82.8
TAR622G1008 Trochodendron aralioides HOM05D004924 ORTHO05D005896 4.3e-64 248.1 128 83.6
Haze_14284 Corylus avellana HOM05D004924 ORTHO05D005896 5.6e-64 247.7 139 80.6
Atru.chr1.1951 Acer truncatum HOM05D004924 ORTHO05D005896 4.8e-63 244.6 128 82.0
CiPaw.03G074000 Carya illinoinensis HOM05D004924 ORTHO05D005896 4.8e-63 244.6 128 82.8
COL.COLO4_17898 Corchorus olitorius HOM05D004924 ORTHO05D005896 4.8e-63 244.6 133 75.9
ECA238G2739 Erigeron canadensis HOM05D004924 ORTHO05D005896 4.8e-63 244.6 128 78.1
QL02p059388 Quercus lobata HOM05D004924 ORTHO05D005896 4.8e-63 244.6 134 79.9
CiPaw.03G073900 Carya illinoinensis HOM05D004924 ORTHO05D005896 6.2e-63 244.2 128 82.0
Duzib133G0699 Durio zibethinus HOM05D004924 ORTHO05D005896 8.1e-63 243.8 128 80.5
Ca_17087_v3 Cicer arietinum L. HOM05D004924 ORTHO05D005896 1.4e-62 243.0 132 78.0
Sopen11g006240 Solanum pennellii HOM05D004924 ORTHO05D005896 1.4e-62 243.0 128 81.2
Lj6g0022987 Lotus japonicus HOM05D004924 ORTHO05D005896 1.8e-62 242.7 135 76.3
TWI53G1907 Tripterygium wilfordii HOM05D004924 ORTHO05D005896 1.8e-62 242.7 128 79.7
Potri.017G132500 Populus trichocarpa HOM05D004924 ORTHO05D005896 4.0e-62 241.5 128 82.8
Solyc11g011450.2 Solanum lycopersicum HOM05D004924 ORTHO05D005896 4.0e-62 241.5 128 80.5
PGSC0003DMG400013239 Solanum tuberosum HOM05D004924 ORTHO05D005896 4.0e-62 241.5 128 80.5
CAN.G222.65 Capsicum annuum HOM05D004924 ORTHO05D005896 6.9e-62 240.7 128 80.5
PSO017G6719 Papaver somniferum HOM05D004924 ORTHO05D005896 9.0e-62 240.4 128 77.3
Oeu062709.1 Olea europaea HOM05D004924 ORTHO05D005896 1.2e-61 240.0 128 79.7
Phvul.001G229100 Phaseolus vulgaris HOM05D004924 ORTHO05D005896 2.0e-61 239.2 133 75.9
Nitab4.5_0001650g0010 Nicotiana tabacum HOM05D004924 ORTHO05D005896 2.6e-61 238.8 128 80.5
Glyma.18G041500 Glycine max HOM05D004924 ORTHO05D005896 4.5e-61 238.0 129 77.5
Lsat_1_v5_gn_2_68260 Lactuca sativa HOM05D004924 ORTHO05D005896 4.5e-61 238.0 128 78.9
TPR.G23209 Trifolium pratense HOM05D004924 ORTHO05D005896 4.5e-61 238.0 133 76.7
HanXRQChr14g0444631 Helianthus annuus HOM05D004924 ORTHO05D005896 7.6e-61 237.3 128 78.9
Psat5g120000 Pisum sativum HOM05D004924 ORTHO05D005896 7.6e-61 237.3 132 75.0
QL02p059397 Quercus lobata HOM05D004924 ORTHO05D005896 1.3e-60 236.5 134 77.6
MSTRG.11290 Avicennia marina HOM05D004924 ORTHO05D005896 2.9e-60 235.3 128 78.1
Prupe.3G165600 Prunus persica HOM05D004924 ORTHO05D005896 2.9e-60 235.3 128 77.3
ClCG08G009070 Citrullus lanatus HOM05D004924 ORTHO05D005896 3.8e-60 235.0 131 77.1
Oeu062710.1 Olea europaea HOM05D004924 ORTHO05D005896 3.8e-60 235.0 134 75.4
Nn3g18375 Nelumbo nucifera HOM05D004924 ORTHO05D005896 4.9e-60 234.6 135 73.3
Eucgr.F02876 Eucalyptus grandis HOM05D004924 ORTHO05D005896 6.4e-60 234.2 137 73.0
Medtr3g065140 Medicago truncatula HOM05D004924 ORTHO05D005896 6.4e-60 234.2 132 73.5
DCAR_011635 Daucus carota HOM05D004924 ORTHO05D005896 8.4e-60 233.8 131 74.8
VMungo1383G1490 Vigna mungo HOM05D004924 ORTHO05D005896 8.4e-60 233.8 133 74.4
Lalb_Chr15g0085011 Lupinus albus HOM05D004924 ORTHO05D005896 1.1e-59 233.4 132 73.5
MBI19_g44856_MAGBIO Magnolia biondii HOM05D004924 ORTHO05D005896 1.4e-59 233.0 132 75.8
MSTRG.11286 Avicennia marina HOM05D004924 ORTHO05D005896 1.9e-59 232.6 125 78.4
FvH4_1g30100 Fragaria vesca HOM05D004924 ORTHO05D005896 2.4e-59 232.3 127 76.4
Gorai.004G266800 Gossypium raimondii HOM05D004924 ORTHO05D005896 2.4e-59 232.3 125 75.2
RcHm_v2.0_Chr3g0491731 Rosa chinensis HOM05D004924 ORTHO05D005896 3.2e-59 231.9 127 77.2
Sed0017700 Sechium edule HOM05D004924 ORTHO05D005896 3.2e-59 231.9 135 71.1
GSVIVG01021786001 Vitis vinifera HOM05D004924 ORTHO05D005896 3.2e-59 231.9 129 76.0
PGR004G0557 Punica granatum HOM05D004924 ORTHO05D005896 5.4e-59 231.1 127 78.0
Glyma.11G215100 Glycine max HOM05D004924 ORTHO05D005896 7.1e-59 230.7 123 78.0
RcHm_v2.0_Chr3g0491661 Rosa chinensis HOM05D004924 ORTHO05D005896 9.3e-59 230.3 127 76.4
Sc11g0004600 Simmondsia chinensis HOM05D004924 ORTHO05D005896 9.3e-59 230.3 128 76.6
FAN16G2823 Fragaria x ananassa HOM05D004924 ORTHO05D005896 1.6e-58 229.6 127 75.6
Glyma.18G041600 Glycine max HOM05D004924 ORTHO05D005896 1.6e-58 229.6 140 70.7
Peaxi162Scf00464g00014 Petunia axillaris HOM05D004924 ORTHO05D005896 1.6e-58 229.6 128 75.8
Gohir.A08G229800 Gossypium hirsutum HOM05D004924 ORTHO05D005896 2.1e-58 229.2 125 74.4
Lj2C517G6 Lonicera japonica HOM05D004924 ORTHO05D005896 2.1e-58 229.2 119 80.7
MD09G1269800 Malus domestica HOM05D004924 ORTHO05D005896 2.1e-58 229.2 128 75.8
MELO3C026504.2 Cucumis melo HOM05D004924 ORTHO05D005896 2.7e-58 228.8 128 75.8
Sabra17G0109800 Salix brachista HOM05D004924 ORTHO05D005896 2.7e-58 228.8 119 84.0
FAN23G2495 Fragaria x ananassa HOM05D004924 ORTHO05D005896 3.5e-58 228.4 127 75.6
RcHm_v2.0_Chr3g0491901 Rosa chinensis HOM05D004924 ORTHO05D005896 4.6e-58 228.0 127 74.8
arahy.Tifrunner.gnm1.ann1.FH3EPN Arachis hypogaea HOM05D004924 ORTHO05D005896 7.9e-58 227.3 132 70.5
CANSAT64G2411 Cannabis sativa HOM05D004924 ORTHO05D005896 7.9e-58 227.3 128 77.3
FvH4_1g27730 Fragaria vesca HOM05D004924 ORTHO05D005896 7.9e-58 227.3 127 73.2
FAN19G2011 Fragaria x ananassa HOM05D004924 ORTHO05D005896 7.9e-58 227.3 127 73.2
unitig_699.g19298 Utricularia gibba HOM05D004924 ORTHO05D005896 1.0e-57 226.9 131 72.5
Eucgr.F02877 Eucalyptus grandis HOM05D004924 ORTHO05D005896 1.3e-57 226.5 137 70.1
Psat5g119920 Pisum sativum HOM05D004924 ORTHO05D005896 1.3e-57 226.5 132 72.7
CsaV3_6G036070 Cucumis sativus L. HOM05D004924 ORTHO05D005896 3.9e-57 224.9 128 74.2
Gohir.D08G250200 Gossypium hirsutum HOM05D004924 ORTHO05D005896 3.9e-57 224.9 125 72.8
Sabra17G0109900 Salix brachista HOM05D004924 ORTHO05D005896 5.1e-57 224.6 121 80.2
SalBow3G4470 Salvia bowleyana HOM05D004924 ORTHO05D005896 6.7e-57 224.2 135 69.6
Aqoxy2G04179 Aquilegia oxysepala HOM05D004924 ORTHO05D005896 8.7e-57 223.8 129 73.6
Lsat_1_v5_gn_3_63921 Lactuca sativa HOM05D004924 ORTHO05D005896 8.7e-57 223.8 126 76.2
Ciclev10013082m.g Citrus clementina HOM05D004924 ORTHO05D005896 1.1e-56 223.4 126 75.4
SGA_v2.0_scaffold108G30967 Striga asiatica HOM05D004924 ORTHO05D005896 1.1e-56 223.4 128 75.0
Gohir.A08G229900 Gossypium hirsutum HOM05D004924 ORTHO05D005896 2.5e-56 222.2 125 73.6
BcaB01g05238 Brassica carinata HOM05D004924 ORTHO05D005896 7.4e-56 220.7 131 73.3
THA.LOC104820884 Tarenaya hassleriana HOM05D004924 ORTHO05D005896 7.4e-56 220.7 126 75.4
Migut.H02231 Erythranthe guttata HOM05D004924 ORTHO05D005896 9.6e-56 220.3 133 69.9
MD09G1269600 Malus domestica HOM05D004924 ORTHO05D005896 1.3e-55 219.9 128 74.2
A03p08080 Brassica napus HOM05D004924 ORTHO05D005896 1.6e-55 219.5 131 71.8
BraA03t10133Z Brassica rapa HOM05D004924 ORTHO05D005896 1.6e-55 219.5 131 71.8
Thhalv10016053m.g Eutrema salsugineum HOM05D004924 ORTHO05D005896 2.1e-55 219.2 128 71.9
FAN10G2899 Fragaria x ananassa HOM05D004924 ORTHO05D005896 2.1e-55 219.2 127 72.4
BcaB01g04965 Brassica carinata HOM05D004924 ORTHO05D005896 2.8e-55 218.8 131 72.5
C03p09350 Brassica napus HOM05D004924 ORTHO05D005896 2.8e-55 218.8 131 72.5
RcHm_v2.0_Chr3g0491691 Rosa chinensis HOM05D004924 ORTHO05D005896 3.7e-55 218.4 127 72.4
CARHR196230 Cardamine hirsuta HOM05D004924 ORTHO05D005896 4.8e-55 218.0 128 73.4
AL6G27940 Arabidopsis lyrata HOM05D004924 ORTHO05D005896 8.1e-55 217.2 128 72.7
ATR0753G109 Amborella trichopoda HOM05D004924 ORTHO05D005896 1.1e-54 216.9 131 68.7
Potri.017G132000 Populus trichocarpa HOM05D004924 ORTHO05D005896 1.1e-54 216.9 126 75.4
HanXRQChr15g0482911 Helianthus annuus HOM05D004924 ORTHO05D005896 2.4e-54 215.7 120 74.2
SEGI_33705 Sequoiadendron giganteum HOM05D004924 ORTHO05D005896 2.4e-54 215.7 133 68.4
AT5G16940 Arabidopsis thaliana HOM05D004924 ORTHO05D005896 3.1e-54 215.3 128 70.3
BolC3t13429H Brassica oleracea HOM05D004924 ORTHO05D005896 3.1e-54 215.3 131 71.8
AUR62006044 Chenopodium quinoa HOM05D004924 ORTHO05D005896 3.1e-54 215.3 128 69.5
Aa31LG11G12660 Aethionema arabicum HOM05D004924 ORTHO05D005896 4.0e-54 214.9 128 70.3
AUR62035584 Chenopodium quinoa HOM05D004924 ORTHO05D005896 5.3e-54 214.5 128 68.8
Psat5g119960 Pisum sativum HOM05D004924 ORTHO05D005896 5.3e-54 214.5 132 70.5
Zm00001eb099200 Zea mays HOM05D004924 ORTHO05D005896 5.3e-54 214.5 129 71.3
Gohir.D08G250300 Gossypium hirsutum HOM05D004924 ORTHO05D005896 6.9e-54 214.2 116 75.0
EL10Ac3g05220 Beta vulgaris HOM05D004924 ORTHO05D005896 1.5e-53 213.0 128 69.5
Os09g0397700 Oryza sativa ssp. japonica HOM05D004924 ORTHO05D005896 2.0e-53 212.6 136 66.9
Carub.0006s1515 Capsella rubella HOM05D004924 ORTHO05D005896 5.8e-53 211.1 128 69.5
MD17G1267700 Malus domestica HOM05D004924 ORTHO05D005896 1.3e-52 209.9 116 77.6
Peaxi162Scf00464g00013 Petunia axillaris HOM05D004924 ORTHO05D005896 2.2e-52 209.1 167 59.9
MELO3C022822.2 Cucumis melo HOM05D004924 ORTHO05D005896 1.1e-51 206.8 120 72.5
Gorai.004G267000 Gossypium raimondii HOM05D004924 ORTHO05D005896 2.4e-51 205.7 116 73.3
Pp3c3_1640 Physcomitrium patens HOM05D004924 ORTHO05D005896 3.2e-51 205.3 130 69.2
ClCG03G008860 Citrullus lanatus HOM05D004924 ORTHO05D005896 9.3e-51 203.8 120 70.8
Ah.13g070610 Amaranthus hybridus HOM05D004924 ORTHO05D005896 4.6e-50 201.4 128 65.6
Zm00001eb099210 Zea mays HOM05D004924 ORTHO05D005896 1.3e-49 199.9 129 67.4
Ciclev10013505m.g Citrus clementina HOM05D004924 ORTHO05D005896 1.8e-49 199.5 121 71.1
MD17G1267500 Malus domestica HOM05D004924 ORTHO05D005896 1.9e-48 196.1 116 72.4
CsaV3_5G023900 Cucumis sativus L. HOM05D004924 ORTHO05D005896 1.1e-46 190.3 111 73.0
Mapoly0175s0005 Marchantia polymorpha HOM05D004924 ORTHO05D005896 1.2e-45 186.8 135 60.0
SMO134G0286 Selaginella moellendorffii HOM05D004924 ORTHO05D005896 2.6e-45 185.7 128 61.7
Gohir.A10G199166 Gossypium hirsutum HOM05D004924 ORTHO05D005896 3.4e-45 185.3 125 61.6
Zm00001eb099170 Zea mays HOM05D004924 ORTHO05D005896 1.7e-44 183.0 108 71.3
Thecc.K0008300 Theobroma cacao HOM05D004924 ORTHO05D005896 6.5e-44 181.0 95 80.0
Zm00001eb099190 Zea mays HOM05D004924 ORTHO05D005896 6.5e-44 181.0 100 76.0
Gohir.A04G085566 Gossypium hirsutum HOM05D004924 ORTHO05D005896 8.4e-44 180.6 125 64.8
AagrBONN_evm.TU.Sc2ySwM_117.508 Anthoceros agrestis HOM05D004924 ORTHO05D005896 4.2e-43 178.3 128 57.8
SMO182G0004 Selaginella moellendorffii HOM05D004924 ORTHO05D005896 3.5e-42 175.3 128 60.2
Glyma.11G214900 Glycine max HOM05D004924 ORTHO05D005896 3.0e-41 172.2 134 60.4
AUR62006043 Chenopodium quinoa HOM05D004924 ORTHO05D005896 1.5e-40 169.9 125 63.2
SMO134G0172 Selaginella moellendorffii HOM05D004924 ORTHO05D005896 5.7e-40 167.9 128 57.0
Ah.13g070620 Amaranthus hybridus HOM05D004924 ORTHO05D005896 1.4e-38 163.3 123 62.6
Lj2C517T7 Lonicera japonica HOM05D004924 ORTHO05D005896 3.1e-38 162.2 95 76.8
AUR62035585 Chenopodium quinoa HOM05D004924 ORTHO05D005896 1.2e-37 160.2 128 60.9
MD09G1269100 Malus domestica HOM05D004924 ORTHO05D005896 1.4e-35 153.3 93 69.9
Gorai.004G266900 Gossypium raimondii HOM05D004924 ORTHO05D005896 1.4e-33 146.7 86 70.9
PRCOL_00006023 Prasinoderma coloniale HOM05D004924 ORTHO05D005896 2.3e-33 146.0 141 46.1
Nitab4.5_0006562g0060 Nicotiana tabacum HOM05D004924 ORTHO05D005896 5.1e-33 144.8 74 85.1
FAN28G0301 Fragaria x ananassa HOM05D004924 ORTHO05D005896 1.2e-26 123.6 68 75.0
Lj1P958T70 Lonicera japonica HOM05D004924 ORTHO05D005896 1.2e-26 123.6 74 75.7
Gohir.A06G089850 Gossypium hirsutum HOM05D004924 ORTHO05D005896 4.4e-24 115.2 107 51.4
Gohir.D06G065233 Gossypium hirsutum HOM05D004924 ORTHO05D005896 4.1e-22 108.6 78 59.0
Gohir.D08G250250 Gossypium hirsutum HOM05D004924 ORTHO05D005896 5.3e-22 108.2 63 71.4
Zm00001eb099180 Zea mays HOM05D004924 ORTHO05D005896 1.0e-20 104.0 80 60.0

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (1 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (3 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (4 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (2 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (2 genes)
Daucus carota (1 genes)
Davidia involucrata (0 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (5 genes)
Glycine max (4 genes)
Gossypium hirsutum (9 genes)
Gossypium raimondii (3 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (3 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (5 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (3 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (4 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (3 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (5 genes)

Program Settings