Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001826 Camellia sinensis var. sinensis HOM05D005050 ORTHO05D006198 1.5e-221 772.7 422 100.0
Actinidia39062 Actinidia chinensis HOM05D005050 ORTHO05D006198 4.3e-189 664.8 421 86.0
Dinv19345 Davidia involucrata HOM05D005050 ORTHO05D006198 3.7e-185 651.7 424 83.7
Rhsim11G0132400 Rhododendron simsii HOM05D005050 ORTHO05D006198 1.3e-169 600.1 443 78.3
Hma1.2p1_0557F.1_g178270 Hydrangea macrophylla HOM05D005050 ORTHO05D006198 2.2e-169 599.4 425 79.1
TAR628G0295 Trochodendron aralioides HOM05D005050 ORTHO05D006198 5.1e-166 588.2 426 76.5
MSTRG.16540 Avicennia marina HOM05D005050 ORTHO05D006198 2.5e-165 585.9 421 75.8
GSVIVG01029689001 Vitis vinifera HOM05D005050 ORTHO05D006198 2.1e-164 582.8 437 75.3
Thecc.02G041900 Theobroma cacao HOM05D005050 ORTHO05D006198 3.2e-160 568.9 427 75.2
Cpa.g.sc2.30 Carica papaya HOM05D005050 ORTHO05D006198 1.2e-159 567.0 430 74.2
Hma1.2p1_0557F.1_g178260 Hydrangea macrophylla HOM05D005050 ORTHO05D006198 2.7e-159 565.8 497 67.4
Gorai.002G001300 Gossypium raimondii HOM05D005050 ORTHO05D006198 1.0e-158 563.9 425 74.6
Cc02_g22180 Coffea canephora HOM05D005050 ORTHO05D006198 5.1e-158 561.6 428 73.1
Gohir.A01G001100 Gossypium hirsutum HOM05D005050 ORTHO05D006198 2.5e-157 559.3 415 75.2
Gohir.D01G000800 Gossypium hirsutum HOM05D005050 ORTHO05D006198 1.3e-156 557.0 425 73.6
Duzib052G0527 Durio zibethinus HOM05D005050 ORTHO05D006198 1.8e-155 553.1 424 74.5
HanXRQChr03g0066561 Helianthus annuus HOM05D005050 ORTHO05D006198 3.1e-155 552.4 411 74.7
Cfa005552 Carpinus fangiana HOM05D005050 ORTHO05D006198 5.3e-155 551.6 425 73.6
QL11p019153 Quercus lobata HOM05D005050 ORTHO05D006198 2.0e-154 549.7 422 74.2
FAN13G0813 Fragaria x ananassa HOM05D005050 ORTHO05D006198 2.6e-154 549.3 430 71.9
Eucgr.G00618 Eucalyptus grandis HOM05D005050 ORTHO05D006198 7.6e-154 547.7 428 72.7
FAN04G2386 Fragaria x ananassa HOM05D005050 ORTHO05D006198 7.6e-154 547.7 430 72.1
TWI59G1202 Tripterygium wilfordii HOM05D005050 ORTHO05D006198 2.9e-153 545.8 429 72.7
FvH4_5g29810 Fragaria vesca HOM05D005050 ORTHO05D006198 3.2e-152 542.3 430 71.9
Ciclev10001338m.g Citrus clementina HOM05D005050 ORTHO05D006198 5.4e-152 541.6 414 72.5
CiPaw.05G042200 Carya illinoinensis HOM05D005050 ORTHO05D006198 9.3e-152 540.8 415 73.7
Lsat_1_v5_gn_9_116221 Lactuca sativa HOM05D005050 ORTHO05D006198 9.3e-152 540.8 430 72.1
ClCG05G009900 Citrullus lanatus HOM05D005050 ORTHO05D006198 1.2e-151 540.4 431 72.4
FAN18G3347 Fragaria x ananassa HOM05D005050 ORTHO05D006198 2.1e-151 539.7 430 71.4
RcHm_v2.0_Chr7g0223331 Rosa chinensis HOM05D005050 ORTHO05D006198 1.3e-150 537.0 429 70.9
Manes.10G132900 Manihot esculenta HOM05D005050 ORTHO05D006198 2.3e-150 536.2 431 71.2
CsaV3_3G018690 Cucumis sativus L. HOM05D005050 ORTHO05D006198 8.7e-150 534.3 430 71.4
MD15G1419700 Malus domestica HOM05D005050 ORTHO05D006198 4.3e-149 531.9 453 67.3
MELO3C019500.2 Cucumis melo HOM05D005050 ORTHO05D006198 5.6e-149 531.6 430 70.9
Prupe.1G564400 Prunus persica HOM05D005050 ORTHO05D006198 5.6e-149 531.6 424 71.2
ECA240G2670 Erigeron canadensis HOM05D005050 ORTHO05D006198 2.1e-148 529.6 415 70.8
PGR042G1149 Punica granatum HOM05D005050 ORTHO05D006198 6.2e-148 528.1 416 72.1
TWI14G0535 Tripterygium wilfordii HOM05D005050 ORTHO05D006198 1.1e-147 527.3 429 71.1
SGA_v2.0_scaffold1G00335 Striga asiatica HOM05D005050 ORTHO05D006198 2.4e-147 526.2 451 66.7
Sed0002635 Sechium edule HOM05D005050 ORTHO05D006198 7.6e-146 521.2 416 71.2
MD08G1227300 Malus domestica HOM05D005050 ORTHO05D006198 4.9e-145 518.5 476 64.1
PGSC0003DMG400029778 Solanum tuberosum HOM05D005050 ORTHO05D006198 1.9e-144 516.5 425 69.4
TWI23G0447 Tripterygium wilfordii HOM05D005050 ORTHO05D006198 7.1e-144 514.6 426 69.7
Migut.B00660 Erythranthe guttata HOM05D005050 ORTHO05D006198 3.5e-143 512.3 423 68.1
Lj6g0001640 Lotus japonicus HOM05D005050 ORTHO05D006198 6.7e-142 508.1 431 68.9
Sed0013576 Sechium edule HOM05D005050 ORTHO05D006198 8.7e-142 507.7 419 69.5
CANSAT11G1507 Cannabis sativa HOM05D005050 ORTHO05D006198 8.2e-140 501.1 422 67.8
Phvul.006G211700 Phaseolus vulgaris HOM05D005050 ORTHO05D006198 5.3e-139 498.4 416 69.2
VMungo0251G1671 Vigna mungo HOM05D005050 ORTHO05D006198 5.3e-139 498.4 416 70.0
FAN08G2278 Fragaria x ananassa HOM05D005050 ORTHO05D006198 1.2e-138 497.3 430 67.0
Solyc01g104560.3 Solanum lycopersicum HOM05D005050 ORTHO05D006198 1.5e-138 496.9 422 67.5
arahy.Tifrunner.gnm1.ann1.V19TN9 Arachis hypogaea HOM05D005050 ORTHO05D006198 2.6e-138 496.1 419 68.5
arahy.Tifrunner.gnm1.ann1.X2Y1CG Arachis hypogaea HOM05D005050 ORTHO05D006198 3.4e-138 495.7 418 68.4
SalBow5G1811 Salvia bowleyana HOM05D005050 ORTHO05D006198 1.3e-137 493.8 422 66.8
Sabra01G0160800 Salix brachista HOM05D005050 ORTHO05D006198 2.2e-137 493.0 422 67.3
SalBow5G5549 Salvia bowleyana HOM05D005050 ORTHO05D006198 2.9e-137 492.7 422 66.6
Nitab4.5_0003071g0060 Nicotiana tabacum HOM05D005050 ORTHO05D006198 1.9e-136 490.0 423 66.7
Atru.chr6.1005 Acer truncatum HOM05D005050 ORTHO05D006198 4.2e-136 488.8 433 67.4
Lj9A312G31 Lonicera japonica HOM05D005050 ORTHO05D006198 4.2e-136 488.8 418 69.1
Lalb_Chr12g0208631 Lupinus albus HOM05D005050 ORTHO05D006198 5.5e-136 488.4 408 70.1
COL.COLO4_17901 Corchorus olitorius HOM05D005050 ORTHO05D006198 2.1e-135 486.5 370 74.6
MBI06_g01048_MAGBIO Magnolia biondii HOM05D005050 ORTHO05D006198 1.8e-134 483.4 420 67.1
Nn1g08554 Nelumbo nucifera HOM05D005050 ORTHO05D006198 6.7e-134 481.5 371 73.0
Nn5g27962 Nelumbo nucifera HOM05D005050 ORTHO05D006198 6.7e-134 481.5 429 66.2
CiPaw.06G149400 Carya illinoinensis HOM05D005050 ORTHO05D006198 2.8e-132 476.1 422 67.8
Medtr2g007800 Medicago truncatula HOM05D005050 ORTHO05D006198 2.8e-132 476.1 418 68.7
Sopen01g047070 Solanum pennellii HOM05D005050 ORTHO05D006198 8.2e-132 474.6 418 66.3
TPR.G2134 Trifolium pratense HOM05D005050 ORTHO05D006198 1.1e-131 474.2 412 68.9
Glyma.08G184100 Glycine max HOM05D005050 ORTHO05D006198 1.2e-130 470.7 415 66.5
Peaxi162Scf00011g00032 Petunia axillaris HOM05D005050 ORTHO05D006198 1.2e-130 470.7 428 63.8
DCAR_029238 Daucus carota HOM05D005050 ORTHO05D006198 1.7e-129 466.8 399 68.2
CAN.G1352.15 Capsicum annuum HOM05D005050 ORTHO05D006198 2.9e-129 466.1 411 66.4
Dinv24255 Davidia involucrata HOM05D005050 ORTHO05D006198 5.0e-129 465.3 293 86.7
Nitab4.5_0009907g0040 Nicotiana tabacum HOM05D005050 ORTHO05D006198 1.4e-128 463.8 422 64.0
Aqoxy5G02481 Aquilegia oxysepala HOM05D005050 ORTHO05D006198 1.9e-128 463.4 435 63.0
PSO170G5110 Papaver somniferum HOM05D005050 ORTHO05D006198 3.9e-126 455.7 408 65.4
AUR62025851 Chenopodium quinoa HOM05D005050 ORTHO05D006198 8.8e-126 454.5 420 63.3
arahy.Tifrunner.gnm1.ann1.UX2R4L Arachis hypogaea HOM05D005050 ORTHO05D006198 5.7e-125 451.8 422 64.0
Duzib132G0934 Durio zibethinus HOM05D005050 ORTHO05D006198 1.3e-124 450.7 429 64.6
Glyma.15G048700 Glycine max HOM05D005050 ORTHO05D006198 4.1e-123 445.7 420 64.3
Hund13068 Selenicereus undatus HOM05D005050 ORTHO05D006198 5.3e-123 445.3 409 65.0
PSO782G5384 Papaver somniferum HOM05D005050 ORTHO05D006198 1.2e-122 444.1 408 64.7
arahy.Tifrunner.gnm1.ann1.HMQ04Z Arachis hypogaea HOM05D005050 ORTHO05D006198 7.7e-122 441.4 426 63.1
HPP92_002179 Vanilla planifolia HOM05D005050 ORTHO05D006198 1.0e-121 441.0 416 62.7
HPP92_002226 Vanilla planifolia HOM05D005050 ORTHO05D006198 1.1e-120 437.6 417 62.6
Carub.0001s1495 Capsella rubella HOM05D005050 ORTHO05D006198 4.2e-120 435.6 413 63.0
Oeu000199.1 Olea europaea HOM05D005050 ORTHO05D006198 5.5e-120 435.3 427 63.2
TAR161G0004 Trochodendron aralioides HOM05D005050 ORTHO05D006198 4.7e-119 432.2 279 81.7
AT1G15200 Arabidopsis thaliana HOM05D005050 ORTHO05D006198 1.4e-118 430.6 418 62.4
Thhalv10007720m.g Eutrema salsugineum HOM05D005050 ORTHO05D006198 1.8e-115 420.2 373 65.7
Sp1g13510 Schrenkiella parvula HOM05D005050 ORTHO05D006198 3.1e-115 419.5 421 60.8
AL1G27280 Arabidopsis lyrata HOM05D005050 ORTHO05D006198 5.3e-115 418.7 453 58.5
CDE12G0224 Ceratophyllum demersum HOM05D005050 ORTHO05D006198 2.0e-114 416.8 422 63.0
BcaB02g06585 Brassica carinata HOM05D005050 ORTHO05D006198 3.8e-113 412.5 413 60.5
THA.LOC104805935 Tarenaya hassleriana HOM05D005050 ORTHO05D006198 5.0e-113 412.1 414 59.7
vmacro01791 Vaccinium macrocarpon HOM05D005050 ORTHO05D006198 6.5e-113 411.8 312 74.7
EL10Ac2g03230 Beta vulgaris HOM05D005050 ORTHO05D006198 3.2e-112 409.5 397 61.2
A06p11180 Brassica napus HOM05D005050 ORTHO05D006198 1.6e-111 407.1 426 59.9
Potri.003G021900 Populus trichocarpa HOM05D005050 ORTHO05D006198 6.7e-110 401.7 407 58.7
BcaC05g25448 Brassica carinata HOM05D005050 ORTHO05D006198 7.4e-109 398.3 385 62.1
C05p13300 Brassica napus HOM05D005050 ORTHO05D006198 7.4e-109 398.3 385 62.1
Ah.10g032530 Amaranthus hybridus HOM05D005050 ORTHO05D006198 4.8e-108 395.6 416 57.9
AUR62029865 Chenopodium quinoa HOM05D005050 ORTHO05D006198 6.5e-105 385.2 353 63.7
unitig_699.g19082 Utricularia gibba HOM05D005050 ORTHO05D006198 4.7e-103 379.0 461 52.7
ATR0121G012 Amborella trichopoda HOM05D005050 ORTHO05D006198 4.8e-100 369.0 396 57.3
Aa31LG1G10 Aethionema arabicum HOM05D005050 ORTHO05D006198 7.0e-99 365.2 375 58.7
Oeu026061.1 Olea europaea HOM05D005050 ORTHO05D006198 3.6e-95 352.8 264 75.0
SHI16611 Sapria himalayana HOM05D005050 ORTHO05D006198 6.1e-95 352.1 414 55.3
CDE01G0517 Ceratophyllum demersum HOM05D005050 ORTHO05D006198 1.4e-94 350.9 431 55.9
Zm00001eb216800 Zea mays HOM05D005050 ORTHO05D006198 9.1e-91 338.2 416 51.9
Lalb_Chr07g0189191 Lupinus albus HOM05D005050 ORTHO05D006198 1.2e-87 327.8 305 64.6
BcaNung05518 Brassica carinata HOM05D005050 ORTHO05D006198 2.1e-87 327.0 409 54.0
unitig_27.g24937 Utricularia gibba HOM05D005050 ORTHO05D006198 3.6e-87 326.2 262 70.6
Sc10g0004970 Simmondsia chinensis HOM05D005050 ORTHO05D006198 3.8e-81 306.2 329 57.8
Psat1g219800 Pisum sativum HOM05D005050 ORTHO05D006198 1.2e-77 294.7 264 68.9
Potri.001G208200 Populus trichocarpa HOM05D005050 ORTHO05D006198 2.7e-74 283.5 268 63.1
BcaB03g14555 Brassica carinata HOM05D005050 ORTHO05D006198 6.6e-73 278.9 268 62.3
C08p45110 Brassica napus HOM05D005050 ORTHO05D006198 4.3e-72 276.2 341 53.4
BraA06t24298Z Brassica rapa HOM05D005050 ORTHO05D006198 4.4e-69 266.2 266 62.8
BolC5t30067H Brassica oleracea HOM05D005050 ORTHO05D006198 5.8e-69 265.8 266 62.8
CARHR015720 Cardamine hirsuta HOM05D005050 ORTHO05D006198 4.9e-68 262.7 276 61.6
BolC8t52057H Brassica oleracea HOM05D005050 ORTHO05D006198 1.7e-65 254.2 276 60.1
AagrBONN_evm.TU.Sc2ySwM_344.3376 Anthoceros agrestis HOM05D005050 ORTHO05D006198 8.6e-65 251.9 422 43.8
CANSAT25G2757 Cannabis sativa HOM05D005050 ORTHO05D006198 1.9e-64 250.8 194 70.6
arahy.Tifrunner.gnm1.ann1.5TH0SF Arachis hypogaea HOM05D005050 ORTHO05D006198 9.5e-64 248.4 263 61.6
Mapoly0066s0029 Marchantia polymorpha HOM05D005050 ORTHO05D006198 2.0e-61 240.7 435 41.6
AUR62018227 Chenopodium quinoa HOM05D005050 ORTHO05D006198 1.3e-60 238.0 342 49.7
BraA09t41526Z Brassica rapa HOM05D005050 ORTHO05D006198 4.9e-60 236.1 247 56.7
Oeu026060.1 Olea europaea HOM05D005050 ORTHO05D006198 2.4e-59 233.8 178 72.5
Os03g0701900 Oryza sativa ssp. japonica HOM05D005050 ORTHO05D006198 8.1e-55 218.8 264 54.9
Pp3c14_12690 Physcomitrium patens HOM05D005050 ORTHO05D006198 5.4e-51 206.1 443 39.1
Zm00001eb054200 Zea mays HOM05D005050 ORTHO05D006198 7.1e-51 205.7 265 52.8
Pp3c17_13310 Physcomitrium patens HOM05D005050 ORTHO05D006198 3.0e-49 200.3 385 39.0
CANSAT35G1170 Cannabis sativa HOM05D005050 ORTHO05D006198 3.9e-49 199.9 136 75.0
CANSAT56G3350 Cannabis sativa HOM05D005050 ORTHO05D006198 3.3e-48 196.8 135 74.8
Haze_01617 Corylus avellana HOM05D005050 ORTHO05D006198 9.6e-48 195.3 192 62.0
BcaB03g14557 Brassica carinata HOM05D005050 ORTHO05D006198 3.1e-46 190.3 182 62.1
Haze_01615 Corylus avellana HOM05D005050 ORTHO05D006198 1.7e-44 184.5 131 76.3
SMO116G0236 Selaginella moellendorffii HOM05D005050 ORTHO05D006198 2.3e-41 174.1 414 37.4
CARHR015710 Cardamine hirsuta HOM05D005050 ORTHO05D006198 6.9e-38 162.5 132 67.4
BcaB03g14552 Brassica carinata HOM05D005050 ORTHO05D006198 3.4e-37 160.2 155 57.4
unitig_27.g24936 Utricularia gibba HOM05D000188 ORTHO05D005820 5.1e-33 146.4 141 57.4
CBR_g5711 Chara braunii HOM05D005050 ORTHO05D006198 2.1e-31 141.0 542 31.4
Actinidia00225 Actinidia chinensis HOM05D000304 ORTHO05D000185 4.2e-19 100.1 182 45.1
BcaNung06586 Brassica carinata HOM05D005050 ORTHO05D006198 9.3e-19 99.0 125 52.8
Sabra03G0013800 Salix brachista HOM05D005050 ORTHO05D006198 3.9e-17 93.6 229 39.7
Cre09.g387300 Chlamydomonas reinhardtii HOM05D005050 ORTHO05D006198 2.4e-06 57.8 108 39.8
Zm00001eb142240 Zea mays HOM05D000061 ORTHO05D000050 3.1e-06 57.4 37 70.3

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (5 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (7 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (4 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (3 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (3 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (3 genes)

Program Settings