Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001538 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 1.1e-195 686.4 333 100.0
CSS0024637 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 1.1e-195 686.4 333 100.0
Dinv29004 Davidia involucrata HOM05D004519 ORTHO05D006283 2.4e-171 605.5 333 86.5
Dinv25262 Davidia involucrata HOM05D004519 ORTHO05D006283 1.8e-166 589.3 333 84.4
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 2.2e-164 582.4 333 82.3
GSVIVG01013060001 Vitis vinifera HOM05D004519 ORTHO05D006283 5.1e-161 571.2 333 81.1
Rhsim11G0021900 Rhododendron simsii HOM05D004519 ORTHO05D006283 1.9e-160 569.3 348 79.9
vmacro00276 Vaccinium macrocarpon HOM05D004519 ORTHO05D006283 7.3e-160 567.4 329 82.1
Eucgr.E00228 Eucalyptus grandis HOM05D004519 ORTHO05D006283 9.5e-160 567.0 332 78.0
Ciclev10001047m.g Citrus clementina HOM05D004519 ORTHO05D006283 3.6e-159 565.1 331 78.2
Cfa012505 Carpinus fangiana HOM05D004519 ORTHO05D006283 4.7e-159 564.7 333 79.3
CANSAT01G0127 Cannabis sativa HOM05D004519 ORTHO05D006283 1.4e-158 563.1 334 78.7
Nn3g19385 Nelumbo nucifera HOM05D004519 ORTHO05D006283 1.4e-158 563.1 333 76.6
RcHm_v2.0_Chr7g0211781 Rosa chinensis HOM05D004519 ORTHO05D006283 1.4e-158 563.1 333 78.1
Oeu027094.2 Olea europaea HOM05D004519 ORTHO05D006283 1.8e-158 562.8 333 80.2
FAN04G1490 Fragaria x ananassa HOM05D004519 ORTHO05D006283 3.1e-158 562.0 331 77.6
FAN13G3061 Fragaria x ananassa HOM05D004519 ORTHO05D006283 4.0e-158 561.6 331 77.9
FvH4_5g23060 Fragaria vesca HOM05D004519 ORTHO05D006283 1.5e-157 559.7 331 77.6
FAN18G3814 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.5e-157 559.7 331 77.6
CiPaw.12G068400 Carya illinoinensis HOM05D004519 ORTHO05D006283 2.0e-157 559.3 332 78.9
CiPaw.11G098500 Carya illinoinensis HOM05D004519 ORTHO05D006283 3.4e-157 558.5 332 78.6
PGR042G1943 Punica granatum HOM05D004519 ORTHO05D006283 6.4e-156 554.3 333 76.6
Potri.001G136600 Populus trichocarpa HOM05D004519 ORTHO05D006283 8.4e-156 553.9 333 76.9
MD06G1026700 Malus domestica HOM05D004519 ORTHO05D006283 1.1e-155 553.5 333 76.6
CAN.G726.25 Capsicum annuum HOM05D004519 ORTHO05D006283 1.4e-155 553.1 333 78.1
Nitab4.5_0000529g0120 Nicotiana tabacum HOM05D004519 ORTHO05D006283 1.9e-155 552.7 332 78.3
Manes.17G018849 Manihot esculenta HOM05D004519 ORTHO05D006283 3.2e-155 552.0 333 77.5
TAR629G2035 Trochodendron aralioides HOM05D004519 ORTHO05D006283 4.2e-155 551.6 333 78.1
HanXRQChr03g0083251 Helianthus annuus HOM05D004519 ORTHO05D006283 5.4e-155 551.2 330 79.1
Sc01g0007150 Simmondsia chinensis HOM05D004519 ORTHO05D006283 5.4e-155 551.2 333 78.4
Cc08_g03490 Coffea canephora HOM05D004519 ORTHO05D006283 1.6e-154 549.7 341 78.6
Nn1g00218 Nelumbo nucifera HOM05D004519 ORTHO05D006283 1.6e-154 549.7 333 75.4
FAN18G1908 Fragaria x ananassa HOM05D004519 ORTHO05D006283 6.0e-154 547.7 347 73.8
Gorai.004G182200 Gossypium raimondii HOM05D004519 ORTHO05D006283 6.0e-154 547.7 333 77.8
MD16G1279400 Malus domestica HOM05D004519 ORTHO05D006283 2.3e-153 545.8 333 75.7
Solyc08g076470.4 Solanum lycopersicum HOM05D004519 ORTHO05D006283 1.5e-152 543.1 333 76.6
Sopen08g025050 Solanum pennellii HOM05D004519 ORTHO05D006283 1.5e-152 543.1 333 76.6
CsaV3_3G048840 Cucumis sativus L. HOM05D004519 ORTHO05D006283 9.6e-152 540.4 331 76.1
HanXRQChr13g0414231 Helianthus annuus HOM05D004519 ORTHO05D006283 1.2e-151 540.0 329 77.8
PSO782G3212 Papaver somniferum HOM05D004519 ORTHO05D006283 6.2e-151 537.7 333 74.8
PSO063G4347 Papaver somniferum HOM05D004519 ORTHO05D006283 8.1e-151 537.3 333 74.8
MSTRG.24848 Avicennia marina HOM05D004519 ORTHO05D006283 2.4e-150 535.8 331 75.8
Gorai.007G033500 Gossypium raimondii HOM05D004519 ORTHO05D006283 2.4e-150 535.8 333 76.9
SGA_v2.0_scaffold198G41070 Striga asiatica HOM05D004519 ORTHO05D006283 2.4e-150 535.8 330 75.8
THA.LOC104812759 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 3.1e-150 535.4 332 74.7
Aqoxy3G02176 Aquilegia oxysepala HOM05D004519 ORTHO05D006283 6.9e-150 534.3 333 73.6
Migut.E00743 Erythranthe guttata HOM05D004519 ORTHO05D006283 1.2e-149 533.5 330 76.1
Gohir.A11G028600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 5.8e-149 531.2 333 76.3
Gohir.D11G030600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 5.8e-149 531.2 333 76.3
MELO3C003440.2 Cucumis melo HOM05D004519 ORTHO05D006283 1.7e-148 529.6 331 75.5
THA.LOC104814413 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 2.2e-148 529.3 331 74.0
Duzib205G0301 Durio zibethinus HOM05D004519 ORTHO05D006283 8.4e-148 527.3 326 76.7
ECA240G3299 Erigeron canadensis HOM05D004519 ORTHO05D006283 1.1e-147 526.9 330 74.8
Lsat_1_v5_gn_6_80100 Lactuca sativa HOM05D004519 ORTHO05D006283 1.1e-147 526.9 330 73.9
Sed0022223 Sechium edule HOM05D004519 ORTHO05D006283 1.1e-147 526.9 331 74.0
Gohir.A03G000032 Gossypium hirsutum HOM05D004519 ORTHO05D006283 5.4e-147 524.6 333 74.8
Lj4g0001331 Lotus japonicus HOM05D004519 ORTHO05D006283 7.1e-147 524.2 333 73.0
Gohir.D03G176300 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.6e-146 523.1 333 74.5
Gorai.003G185500 Gossypium raimondii HOM05D004519 ORTHO05D006283 1.6e-146 523.1 333 74.5
Lalb_Chr16g0381061 Lupinus albus HOM05D004519 ORTHO05D006283 6.0e-146 521.2 333 72.4
DCAR_008221 Daucus carota HOM05D004519 ORTHO05D006283 7.8e-146 520.8 365 69.9
Sabra01G0105700 Salix brachista HOM05D004519 ORTHO05D006283 2.3e-145 519.2 380 66.8
ATR0829G164 Amborella trichopoda HOM05D004519 ORTHO05D006283 3.0e-145 518.8 333 73.6
VMungo1215G0394 Vigna mungo HOM05D004519 ORTHO05D006283 1.5e-144 516.5 333 73.0
Lalb_Chr09g0325481 Lupinus albus HOM05D004519 ORTHO05D006283 7.3e-144 514.2 333 73.0
Aa31LG2G13810 Aethionema arabicum HOM05D004519 ORTHO05D006283 9.6e-144 513.8 333 71.8
MBI04_g32203_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 9.6e-144 513.8 360 68.6
Glyma.01G014200 Glycine max HOM05D004519 ORTHO05D006283 1.3e-143 513.5 333 72.7
Glyma.09G207900 Glycine max HOM05D004519 ORTHO05D006283 2.1e-143 512.7 333 72.4
SEGI_02196 Sequoiadendron giganteum HOM05D004519 ORTHO05D006283 2.1e-143 512.7 331 72.5
Medtr5g029230 Medicago truncatula HOM05D004519 ORTHO05D006283 2.8e-143 512.3 333 73.0
Psat2g139000 Pisum sativum HOM05D004519 ORTHO05D006283 2.8e-143 512.3 333 72.4
Zm00001eb025080 Zea mays HOM05D004519 ORTHO05D006283 1.4e-142 510.0 333 71.2
BcaC05g27905 Brassica carinata HOM05D004519 ORTHO05D006283 1.8e-142 509.6 333 70.3
Thhalv10007540m.g Eutrema salsugineum HOM05D004519 ORTHO05D006283 3.1e-142 508.8 333 70.3
A05p25130 Brassica napus HOM05D004519 ORTHO05D006283 5.3e-142 508.1 333 70.0
BraA05t21393Z Brassica rapa HOM05D004519 ORTHO05D006283 5.3e-142 508.1 333 70.0
BcaB03g13753 Brassica carinata HOM05D004519 ORTHO05D006283 9.0e-142 507.3 333 70.0
TPR.G19434 Trifolium pratense HOM05D004519 ORTHO05D006283 9.0e-142 507.3 333 72.4
Zm00001eb224960 Zea mays HOM05D004519 ORTHO05D006283 9.0e-142 507.3 333 70.3
Os10g0577900 Oryza sativa ssp. japonica HOM05D004519 ORTHO05D006283 1.5e-141 506.5 333 69.4
Sp1g27880 Schrenkiella parvula HOM05D004519 ORTHO05D006283 2.0e-141 506.1 333 70.3
Carub.0001s3053 Capsella rubella HOM05D004519 ORTHO05D006283 4.5e-141 505.0 333 69.7
BcaC05g27251 Brassica carinata HOM05D004519 ORTHO05D006283 1.7e-140 503.1 333 70.0
ClCG09G011630 Citrullus lanatus HOM05D004519 ORTHO05D006283 1.7e-140 503.1 349 69.9
AL1G46330 Arabidopsis lyrata HOM05D004519 ORTHO05D006283 2.2e-140 502.7 333 69.1
AT1G32200 Arabidopsis thaliana HOM05D004519 ORTHO05D006283 2.2e-140 502.7 333 69.4
C05p31600 Brassica napus HOM05D004519 ORTHO05D006283 2.2e-140 502.7 333 70.0
BolC5t31883H Brassica oleracea HOM05D004519 ORTHO05D006283 2.2e-140 502.7 333 70.0
Phvul.002G136600 Phaseolus vulgaris HOM05D004519 ORTHO05D006283 6.4e-140 501.1 333 70.0
BcaB07g32892 Brassica carinata HOM05D004519 ORTHO05D006283 8.4e-140 500.7 333 69.4
Ca_25177_v3 Cicer arietinum L. HOM05D004519 ORTHO05D006283 1.1e-139 500.4 323 73.7
A09p34000 Brassica napus HOM05D004519 ORTHO05D006283 1.4e-139 500.0 333 69.7
Nitab4.5_0012493g0010 Nicotiana tabacum HOM05D004519 ORTHO05D006283 2.7e-138 495.7 309 77.0
CARHR031570 Cardamine hirsuta HOM05D004519 ORTHO05D006283 3.5e-138 495.4 333 68.8
QL12p001672 Quercus lobata HOM05D004519 ORTHO05D006283 3.5e-138 495.4 455 55.2
AUR62018641 Chenopodium quinoa HOM05D004519 ORTHO05D006283 4.6e-138 495.0 331 71.3
BcaB04g17996 Brassica carinata HOM05D004519 ORTHO05D006283 6.0e-138 494.6 332 69.0
BolC8t47999H Brassica oleracea HOM05D004519 ORTHO05D006283 7.9e-138 494.2 332 68.7
BcaC07g37628 Brassica carinata HOM05D004519 ORTHO05D006283 1.3e-137 493.4 332 68.7
A08p09320 Brassica napus HOM05D004519 ORTHO05D006283 1.8e-137 493.0 332 68.7
BraA08t32930Z Brassica rapa HOM05D004519 ORTHO05D006283 1.8e-137 493.0 332 68.7
AUR62007353 Chenopodium quinoa HOM05D004519 ORTHO05D006283 6.7e-137 491.1 353 67.4
Prupe.5G027200 Prunus persica HOM05D004519 ORTHO05D006283 6.2e-135 484.6 333 68.5
Haze_08164 Corylus avellana HOM05D004519 ORTHO05D006283 5.3e-134 481.5 318 73.0
CDE12G0245 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 2.6e-133 479.2 309 72.2
Lj2A231G41 Lonicera japonica HOM05D004519 ORTHO05D006283 9.9e-133 477.2 360 67.2
Thecc.03G310400 Theobroma cacao HOM05D004519 ORTHO05D006283 4.2e-131 471.9 333 69.4
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea HOM05D004519 ORTHO05D006283 6.7e-129 464.5 311 71.1
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea HOM05D004519 ORTHO05D006283 6.7e-129 464.5 311 71.1
Duzib068G1409 Durio zibethinus HOM05D004519 ORTHO05D006283 6.2e-127 458.0 333 69.1
C05p39140 Brassica napus HOM05D004519 ORTHO05D006283 1.4e-126 456.8 293 70.6
BraA09t38946Z Brassica rapa HOM05D004519 ORTHO05D006283 3.4e-125 452.2 333 65.5
unitig_32.g10899 Utricularia gibba HOM05D004519 ORTHO05D006283 5.8e-125 451.4 288 72.9
Mapoly0045s0098 Marchantia polymorpha HOM05D004519 ORTHO05D006283 3.8e-124 448.7 331 60.7
Gohir.D08G174500 Gossypium hirsutum HOM05D004519 ORTHO05D006283 6.5e-124 448.0 262 79.0
Peaxi162Scf00170g00818 Petunia axillaris HOM05D004519 ORTHO05D006283 6.5e-124 448.0 333 66.1
CDE04G2515 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 3.2e-123 445.7 313 67.4
Gohir.A08G153600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 5.5e-123 444.9 262 78.6
EL10Ac5g12013 Beta vulgaris HOM05D004519 ORTHO05D006283 2.5e-120 436.0 350 60.0
Pp3c7_2970 Physcomitrium patens HOM05D004519 ORTHO05D006283 4.1e-118 428.7 331 56.8
HanXRQChr06g0172791 Helianthus annuus HOM05D004519 ORTHO05D006283 6.9e-118 427.9 331 64.4
HPP92_020895 Vanilla planifolia HOM05D004519 ORTHO05D006283 2.0e-117 426.4 260 75.8
SMO244G0022 Selaginella moellendorffii HOM05D004519 ORTHO05D006283 2.2e-116 422.9 331 58.6
FAN08G3243 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.9e-116 422.5 288 68.8
Actinidia01317 Actinidia chinensis HOM05D004519 ORTHO05D006283 4.5e-109 398.7 210 89.5
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 1.0e-108 397.5 333 56.8
EL10Ac5g12011 Beta vulgaris HOM05D004519 ORTHO05D006283 6.5e-108 394.8 350 56.0
DCAR_004271 Daucus carota HOM05D004519 ORTHO05D006283 8.5e-108 394.4 248 74.6
Eucgr.E01634 Eucalyptus grandis HOM05D004519 ORTHO05D006283 1.1e-107 394.0 249 73.1
Haze_08160 Corylus avellana HOM05D004519 ORTHO05D006283 7.9e-106 387.9 255 72.9
Cpa.g.sc208.3 Carica papaya HOM05D004519 ORTHO05D006283 8.2e-103 377.9 217 79.7
CBR_g4494 Chara braunii HOM05D004519 ORTHO05D006283 1.5e-101 373.6 344 52.9
Atru.chr6.1525 Acer truncatum HOM05D004519 ORTHO05D006283 3.1e-94 349.4 206 80.1
Cre02.g143000 Chlamydomonas reinhardtii HOM05D004519 ORTHO05D006283 2.9e-76 289.7 311 46.0
Actinidia29340 Actinidia chinensis HOM05D004519 ORTHO05D006283 7.5e-72 275.0 163 81.6
PRCOL_00006772 Prasinoderma coloniale HOM05D004519 ORTHO05D006283 2.6e-64 250.0 300 42.3
MCO03G317 Micromonas commoda HOM05D004519 ORTHO05D006283 1.6e-61 240.7 297 44.1
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 8.3e-55 218.4 176 63.1
MBI15_g25773_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 2.9e-39 166.8 98 75.5
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 4.6e-37 159.5 83 88.0
Cpa.g.sc208.5 Carica papaya HOM05D004519 ORTHO05D006283 2.8e-26 123.6 73 76.7
HanXRQChr16g0500211 Helianthus annuus HOM05D004519 ORTHO05D006283 4.8e-26 122.9 77 74.0
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 7.9e-21 105.5 108 51.9
Haze_20066 Corylus avellana HOM05D004519 ORTHO05D007437 3.7e-18 96.7 95 51.6
Actinidia01316 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.8e-17 94.4 62 71.0
PGSC0003DMG401014796 Solanum tuberosum HOM05D004519 ORTHO05D006283 4.0e-17 93.2 93 50.5
Gohir.D08G117301 Gossypium hirsutum HOM05D004519 ORTHO05D017048 2.9e-15 87.0 55 70.9
Gohir.D11G228750 Gossypium hirsutum HOM05D004519 ORTHO05D017048 2.9e-15 87.0 55 70.9
Gohir.D11G251850 Gossypium hirsutum HOM05D004519 ORTHO05D017048 2.9e-15 87.0 55 70.9
Gohir.D13G135501 Gossypium hirsutum HOM05D004519 ORTHO05D017048 8.4e-15 85.5 55 69.1
RcHm_v2.0_Chr5g0062811 Rosa chinensis HOM05D004519 ORTHO05D017048 8.4e-15 85.5 54 70.4
Gorai.008G116000 Gossypium raimondii HOM05D004519 ORTHO05D017048 4.2e-14 83.2 54 68.5
Actinidia29341 Actinidia chinensis HOM05D004519 ORTHO05D052920 2.1e-10 70.9 50 68.0
arahy.Tifrunner.gnm1.ann1.18EICQ Arachis hypogaea HOM05D000755 ORTHO05D017477 3.4e-08 63.5 59 54.2
Gohir.D02G161780 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.9e-06 57.8 35 71.4
Gohir.D10G176966 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.9e-06 57.8 35 71.4

Acer truncatum (1 genes)
Actinidia chinensis (4 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (2 genes)
Brassica carinata (6 genes)
Brassica napus (5 genes)
Brassica oleracea (2 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (0 genes)
Corylus avellana (3 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (3 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (12 genes)
Gossypium raimondii (4 genes)
Helianthus annuus (4 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (2 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings