Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001259 Camellia sinensis var. sinensis HOM05D002593 ORTHO05D006476 7.0e-43 176.8 84 100.0
CSS0038308 Camellia sinensis var. sinensis HOM05D002593 ORTHO05D006476 2.0e-42 175.3 84 98.8
CSS0004310 Camellia sinensis var. sinensis HOM05D002593 ORTHO05D006476 1.8e-38 162.2 79 97.5
CSS0033070 Camellia sinensis var. sinensis HOM05D002593 ORTHO05D006476 1.8e-38 162.2 79 97.5
Actinidia06597 Actinidia chinensis HOM05D002593 ORTHO05D006476 9.2e-35 149.8 81 87.7
Dinv07259 Davidia involucrata HOM05D002593 ORTHO05D006476 6.2e-31 137.1 81 82.7
Ciclev10000418m.g Citrus clementina HOM05D002593 ORTHO05D006476 2.3e-30 135.2 81 80.2
Rhsim10G0129800 Rhododendron simsii HOM05D002593 ORTHO05D006476 5.8e-29 130.6 78 80.8
Oeu042316.1 Olea europaea HOM05D002593 ORTHO05D006476 2.2e-28 128.6 81 75.3
Potri.005G070700 Populus trichocarpa HOM05D002593 ORTHO05D006476 6.4e-28 127.1 80 76.2
vmacro12772 Vaccinium macrocarpon HOM05D002593 ORTHO05D006476 8.3e-28 126.7 79 79.7
CiPaw.07G075900 Carya illinoinensis HOM05D002593 ORTHO05D006476 3.2e-27 124.8 81 74.1
MELO3C008996.2 Cucumis melo HOM05D002593 ORTHO05D006476 3.2e-27 124.8 81 74.1
Migut.L00269 Erythranthe guttata HOM05D002593 ORTHO05D006476 3.2e-27 124.8 81 74.1
DCAR_000693 Daucus carota HOM05D002593 ORTHO05D006476 4.1e-27 124.4 81 76.5
CsaV3_4G031190 Cucumis sativus L. HOM05D002593 ORTHO05D006476 5.4e-27 124.0 81 74.1
MSTRG.3600 Avicennia marina HOM05D002593 ORTHO05D006476 7.0e-27 123.6 82 73.2
SalBow7G4483 Salvia bowleyana HOM05D002593 ORTHO05D006476 7.0e-27 123.6 81 71.6
Lj1A109G43 Lonicera japonica HOM05D002593 ORTHO05D006476 1.2e-26 122.9 83 74.7
TAR381G0271 Trochodendron aralioides HOM05D002593 ORTHO05D006476 1.2e-26 122.9 81 74.1
TAR381G0660 Trochodendron aralioides HOM05D002593 ORTHO05D006476 1.2e-26 122.9 81 74.1
Hma1.2p1_0619F.1_g190360 Hydrangea macrophylla HOM05D002593 ORTHO05D006476 3.5e-26 121.3 81 72.8
Peaxi162Scf00076g01057 Petunia axillaris HOM05D002593 ORTHO05D006476 4.6e-26 120.9 80 73.8
Atru.chr4.1131 Acer truncatum HOM05D002593 ORTHO05D006476 6.0e-26 120.6 81 67.9
ClCG04G001200 Citrullus lanatus HOM05D002593 ORTHO05D006476 6.0e-26 120.6 81 71.6
MD05G1249400 Malus domestica HOM05D002593 ORTHO05D006476 1.7e-25 119.0 81 72.8
Cfa002122 Carpinus fangiana HOM05D002593 ORTHO05D006476 2.3e-25 118.6 81 71.6
TWI79G0542 Tripterygium wilfordii HOM05D002593 ORTHO05D006476 2.3e-25 118.6 81 69.1
PGR119G1937 Punica granatum HOM05D002593 ORTHO05D006476 3.9e-25 117.9 81 67.9
RcHm_v2.0_Chr5g0020561 Rosa chinensis HOM05D002593 ORTHO05D006476 5.0e-25 117.5 81 70.4
Sabra05G0057500 Salix brachista HOM05D002593 ORTHO05D006476 5.0e-25 117.5 82 70.7
Cc11_g02090 Coffea canephora HOM05D002593 ORTHO05D006476 8.6e-25 116.7 79 69.6
Nitab4.5_0002512g0060 Nicotiana tabacum HOM05D002593 ORTHO05D006476 8.6e-25 116.7 79 69.6
PGSC0003DMG401014557 Solanum tuberosum HOM05D002593 ORTHO05D006476 8.6e-25 116.7 79 69.6
PGSC0003DMG402014557 Solanum tuberosum HOM05D002593 ORTHO05D006476 1.1e-24 116.3 79 70.9
GSVIVG01022377001 Vitis vinifera HOM05D002593 ORTHO05D006476 1.1e-24 116.3 82 69.5
QL01p049838 Quercus lobata HOM05D002593 ORTHO05D006476 1.5e-24 115.9 72 77.8
CANSAT01G0469 Cannabis sativa HOM05D002593 ORTHO05D006476 1.9e-24 115.5 81 69.1
Eucgr.I00094 Eucalyptus grandis HOM05D002593 ORTHO05D006476 1.9e-24 115.5 81 70.4
FAN25G3668 Fragaria x ananassa HOM05D002593 ORTHO05D006476 2.5e-24 115.2 81 67.9
Solyc05g009080.4 Solanum lycopersicum HOM05D002593 ORTHO05D006476 2.5e-24 115.2 79 68.4
CAN.G610.52 Capsicum annuum HOM05D002593 ORTHO05D006476 4.3e-24 114.4 79 69.6
FvH4_3g12600 Fragaria vesca HOM05D002593 ORTHO05D006476 4.3e-24 114.4 81 69.1
FAN16G0380 Fragaria x ananassa HOM05D002593 ORTHO05D006476 4.3e-24 114.4 81 69.1
FAN16G0459 Fragaria x ananassa HOM05D002593 ORTHO05D006476 4.3e-24 114.4 81 69.1
Sed0011819 Sechium edule HOM05D002593 ORTHO05D006476 4.3e-24 114.4 81 69.1
Sopen05g004810 Solanum pennellii HOM05D002593 ORTHO05D006476 4.3e-24 114.4 79 67.1
SGA_v2.0_scaffold244G44338 Striga asiatica HOM05D002593 ORTHO05D006476 1.2e-23 112.8 82 68.3
Cpa.g.sc37.46 Carica papaya HOM05D002593 ORTHO05D006476 1.6e-23 112.5 77 70.1
COL.COLO4_12118 Corchorus olitorius HOM05D002593 ORTHO05D003294 1.6e-23 112.5 82 69.5
Lalb_Chr12g0202891 Lupinus albus HOM05D002593 ORTHO05D006476 4.7e-23 110.9 82 70.7
Hund21782 Selenicereus undatus HOM05D002593 ORTHO05D006476 4.7e-23 110.9 80 70.0
Aqoxy6G00211 Aquilegia oxysepala HOM05D002593 ORTHO05D006476 1.1e-22 109.8 82 67.1
EL10Ac4g09659 Beta vulgaris HOM05D002593 ORTHO05D006476 1.8e-22 109.0 82 68.3
Gohir.D09G005200 Gossypium hirsutum HOM05D002593 ORTHO05D006476 3.1e-22 108.2 86 68.6
Gorai.006G006800 Gossypium raimondii HOM05D002593 ORTHO05D006476 3.1e-22 108.2 86 68.6
Lalb_Chr23g0272731 Lupinus albus HOM05D002593 ORTHO05D006476 4.0e-22 107.8 83 67.5
Psat7g043240 Pisum sativum HOM05D002593 ORTHO05D006476 4.0e-22 107.8 82 67.1
PSO170G1422 Papaver somniferum HOM05D002593 ORTHO05D006476 5.2e-22 107.5 86 62.8
AUR62000559 Chenopodium quinoa HOM05D002593 ORTHO05D006476 6.8e-22 107.1 81 67.9
PSO528G0279 Papaver somniferum HOM05D002593 ORTHO05D006476 6.8e-22 107.1 86 62.8
HanXRQChr03g0087641 Helianthus annuus HOM05D002593 ORTHO05D006476 8.9e-22 106.7 79 69.6
Gohir.A09G006100 Gossypium hirsutum HOM05D002593 ORTHO05D006476 1.2e-21 106.3 86 68.6
Thecc.01G142600 Theobroma cacao HOM05D002593 ORTHO05D006476 1.2e-21 106.3 82 64.6
Lj4g0024429 Lotus japonicus HOM05D002593 ORTHO05D006476 2.6e-21 105.1 82 65.9
Medtr8g094800 Medicago truncatula HOM05D002593 ORTHO05D006476 3.4e-21 104.8 83 63.9
Ah.06g188520 Amaranthus hybridus HOM05D002593 ORTHO05D006476 4.4e-21 104.4 81 69.1
Aa31LG3G17840 Aethionema arabicum HOM05D002593 ORTHO05D006476 7.5e-21 103.6 81 65.4
Ca_17607_v3 Cicer arietinum L. HOM05D002593 ORTHO05D006476 7.5e-21 103.6 82 64.6
AT5G08720 Arabidopsis thaliana HOM05D002593 ORTHO05D006476 1.3e-20 102.8 84 61.9
Duzib187G0031 Durio zibethinus HOM05D002593 ORTHO05D006476 1.3e-20 102.8 86 65.1
Carub.0006s0769 Capsella rubella HOM05D002593 ORTHO05D006476 1.7e-20 102.4 85 62.4
AUR62006910 Chenopodium quinoa HOM05D002593 ORTHO05D006476 1.7e-20 102.4 82 67.1
AL6G19470 Arabidopsis lyrata HOM05D002593 ORTHO05D006476 2.9e-20 101.7 84 60.7
ECA248G3631 Erigeron canadensis HOM05D002593 ORTHO05D006476 2.9e-20 101.7 79 67.1
BcaB08g37230 Brassica carinata HOM05D002593 ORTHO05D006476 4.9e-20 100.9 86 61.6
C09p68260 Brassica napus HOM05D002593 ORTHO05D006476 4.9e-20 100.9 86 61.6
BolC9t59574H Brassica oleracea HOM05D002593 ORTHO05D006476 4.9e-20 100.9 86 61.6
Sp6g34150 Schrenkiella parvula HOM05D002593 ORTHO05D006476 8.3e-20 100.1 89 60.7
Sc06g0005350 Simmondsia chinensis HOM05D002593 ORTHO05D006476 8.3e-20 100.1 72 68.1
A10p28060 Brassica napus HOM05D002593 ORTHO05D006476 1.1e-19 99.8 86 61.6
BraA10t44855Z Brassica rapa HOM05D002593 ORTHO05D006476 1.1e-19 99.8 86 61.6
VMungo1309G1997 Vigna mungo HOM05D002593 ORTHO05D006476 1.1e-19 99.8 76 68.4
CARHR204290 Cardamine hirsuta HOM05D002593 ORTHO05D006476 1.9e-19 99.0 86 60.5
TPR.G37380 Trifolium pratense HOM05D002593 ORTHO05D006476 1.9e-19 99.0 81 61.7
Thhalv10015845m.g Eutrema salsugineum HOM05D002593 ORTHO05D006476 2.4e-19 98.6 85 60.0
arahy.Tifrunner.gnm1.ann1.06HUX3 Arachis hypogaea HOM05D002593 ORTHO05D006476 3.2e-19 98.2 82 63.4
Lsat_1_v5_gn_1_80920 Lactuca sativa HOM05D002593 ORTHO05D006476 3.2e-19 98.2 79 65.8
arahy.Tifrunner.gnm1.ann1.3HC2CW Arachis hypogaea HOM05D002593 ORTHO05D006476 9.2e-19 96.7 82 63.4
Glyma.04G207200 Glycine max HOM05D002593 ORTHO05D006476 9.2e-19 96.7 79 64.6
Glyma.08G003500 Glycine max HOM05D002593 ORTHO05D006476 9.2e-19 96.7 83 62.7
CDE02G1715 Ceratophyllum demersum HOM05D002593 ORTHO05D006476 1.2e-18 96.3 79 59.5
Glyma.05G195900 Glycine max HOM05D002593 ORTHO05D006476 2.7e-18 95.1 83 61.4
Phvul.002G276400 Phaseolus vulgaris HOM05D002593 ORTHO05D006476 3.5e-18 94.7 83 62.7
Phvul.009G151900 Phaseolus vulgaris HOM05D002593 ORTHO05D006476 6.0e-18 94.0 79 62.0
Os03g0837900 Oryza sativa ssp. japonica HOM05D002593 ORTHO05D006476 7.8e-18 93.6 79 57.0
Haze_16323 Corylus avellana HOM05D002593 ORTHO05D006476 1.3e-17 92.8 61 73.8
VMungo0251G1864 Vigna mungo HOM05D002593 ORTHO05D006476 1.3e-17 92.8 83 59.0
TWI31G0641 Tripterygium wilfordii HOM05D002593 ORTHO05D006476 9.5e-16 86.7 79 57.0
Hma1.2p1_0619F.1_g190380 Hydrangea macrophylla HOM05D002593 ORTHO05D006476 2.0e-13 79.0 46 78.3
arahy.Tifrunner.gnm1.ann1.2HG3UE Arachis hypogaea HOM05D002593 ORTHO05D006476 5.8e-13 77.4 80 60.0
arahy.Tifrunner.gnm1.ann1.VT8BG2 Arachis hypogaea HOM05D002593 ORTHO05D006476 5.8e-13 77.4 80 60.0
FAN26G1490 Fragaria x ananassa HOM05D002593 ORTHO05D006476 4.9e-12 74.3 50 70.0
arahy.Tifrunner.gnm1.ann1.898NT1 Arachis hypogaea HOM05D002593 ORTHO05D006476 8.4e-12 73.6 73 56.2
Actinidia20056 Actinidia chinensis HOM05D002593 ORTHO05D006476 4.1e-11 71.2 40 82.5
unitig_899.g14455 Utricularia gibba HOM05D002593 ORTHO05D006476 6.0e-10 67.4 74 51.4
SEGI_39457 Sequoiadendron giganteum HOM05D002593 ORTHO05D006476 9.0e-06 53.5 30 73.3

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (5 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (1 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings